These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2947#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 386 fasta sequence [TGGCGGACATTGCGATCGGGCTGATGCTAGCCGCGGCCCGGCGGTTCCACGAAGGTCGGCTCAAGATTGCCACCGGTGAGTGGGAAATGCGACCACAGTGGATGTTGGGCCAGGATGTTCCCGGATCGACGGTTGGCATCGTAGGGTTCGGCGGCATCGGGACAAACGATACTGAACGTCTGAAAGGTTCGACATTTGGACGGTGTCTGTACCCCGGTAAGGAACCAGAAACCCGAACCTTGAATCTGGGTTGGAACATCGAAGTTCAATTTGGCAACCCCTGCTGGCGGGAAAAGCGATTTCCTAATTCATCCCCCCTGGCCCCCTTAACGGGGCCAAAACGGCCAAGGAATGGTTCAATTCCCCGAAACCCCCCCCCCCTTGAA] [+] EMBL BM657757 [TGGCGGACATTGCGATCGGGCTGATGCTAGCCGCGGCCCGGCGGTTCCACGAAGGTCGGCTCAAGATTGCCACCGGTGAGTGGGAAATGCGACCACAGTGGATGTTGGGCCAGGATGTTCCCGGATCGACGGTTGGCATCGTAGGGTTCGGCGGCATCGGGACAAACGATACTGAACGTCTGAAAGGTTCGACATTTGGACGGTGTCTGTACCCCGGTAAGGAACCAGAAACCCGAACCTTGAATCTGGGTTGGAACATCGAAGTTCAATTTGGCAACCCCTGCTGGCGGGAAAAGCGATTTCCTAATTCATCCCCCCTGGCCCCCTTAACGGGGCCAAAACGGCCAAGGAATGGTTCAATTCCCCGAAACCCCCCCCCCCTTGAA] consensusID : consensus_2947#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 381 fasta sequence [TGGCGGACATTGCGATCGGGCTGATGCTAGCCGCGGCCCGGCGGTTCCACGAAGGTCGGCTCAAGATTGCCACCGGTGAGTGGGAAATGCGACCACAGTGGATGTTGGGCCAGGATGTTCCCGGATCGACGGTTGGCATCGTAGGGTTCGGCGGCATCGGACAAACGATACTGAAGCGTCTGAAAGGGTTCGACATTGGACGGTGTCTGTACACGGGTAGGAGCAGGAAGCCGGAAGCTGATCTGGTCGGAGCGTCGTACGTCGATCTGGCAACGCTGCTGCGGGAAAGCGATTTCGTATTCATCGCCTGCCCGCTGACGGGCGAAACGGCAAGGATGTTCAATCGCGAAACGCTCGCGCTGATGAAACGGTCGAGCGTGT] [+] EMBL BX618346 [TGGCGGACATTGCGATCGGGCTGATGCTAGCCGCGGCCCGGCGGTTCCACGAAGGTCGGCTCAAGATTGCCACCGGTGAGTGGGAAATGCGACCACAGTGGATGTTGGGCCAGGATGTTCCCGGATCGACGGTTGGCATCGTAGGGTTCGGCGGCATCGGACAAACGATACTGAAGCGTCTGAAAGGGTTCGACATTGGACGGTGTCTGTACACGGGTAGGAGCAGGAAGCCGGAAGCTGATCTGGTCGGAGCGTCGTACGTCGATCTGGCAACGCTGCTGCGGGAAAGCGATTTCGTATTCATCGCCTGCCCGCTGACGGGCGAAACGGCAAGGATGTTCAATCGCGAAACGCTCGCGCTGATGAAACGGTCGAGCGTGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2947#0 TGGCGGACATTGCGATCGGGCTGATGCTAGCCGCGGCCCGGCGGTTCCACGAAGGTCGGC 60 consensus_2947#1 TGGCGGACATTGCGATCGGGCTGATGCTAGCCGCGGCCCGGCGGTTCCACGAAGGTCGGC 60 ************************************************************ consensus_2947#0 TCAAGATTGCCACCGGTGAGTGGGAAATGCGACCACAGTGGATGTTGGGCCAGGATGTTC 120 consensus_2947#1 TCAAGATTGCCACCGGTGAGTGGGAAATGCGACCACAGTGGATGTTGGGCCAGGATGTTC 120 ************************************************************ consensus_2947#0 CCGGATCGACGGTTGGCATCGTAGGGTTCGGCGGCATCGGGACAAACGATACTGAA-CGT 179 consensus_2947#1 CCGGATCGACGGTTGGCATCGTAGGGTTCGGCGGCATCGG-ACAAACGATACTGAAGCGT 179 **************************************** *************** *** consensus_2947#0 CTGAAAGG-TTCGACATTTGGACGGTGTCTGTACCCCGGTAAGGAACCAGAAACCCGAAC 238 consensus_2947#1 CTGAAAGGGTTCGACATT-GGACGGTGTCTGTACACGGGTA-GGAGCAGGAAGCCGGAAG 237 ******** ********* *************** * **** *** * *** ** *** consensus_2947#0 CTTGAATCTGGGTTGGAACATCGAAGTTCAATTTGGCAACCCCTGCTGGCGGGAAAAGCG 298 consensus_2947#1 CT--GATCTGG-TCGGAGCGTCGTACGTCGATCTGGCAACGC-TGCTGC--GGGAAAGCG 291 ** ****** * *** * *** * ** ** ******* * ***** ** ****** consensus_2947#0 ATTTCCTAATTCATCCCCCCTGGCCCCCTTAACGGGGCCAAAACGGCCAAGGAATGGTTC 358 consensus_2947#1 ATTTCGTA-TTCATCGCCTG----CCCGCTGACGGG--CGAAACGGC--AAGGATG-TTC 341 ***** ** ****** ** *** * ***** * ******* * * *** *** consensus_2947#0 AATTCCCCGAAACCCCCCCCCCCTTGAA-------------- 386 consensus_2947#1 AAT--CGCGAAACGCTCGCGCTGATGAAACGGTCGAGCGTGT 381 *** * ****** * * * * **** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||