These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2965#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 583 fasta sequence [GGTATTGAGGGCTTCGATTCACCTTTAAATCTTGTAACAATTCCCACGATTAAATGGTTTTCAACGTTTCAAACGAAAATCGTTAACACTTCAAAACTTGAAACATATCAGAATAGTAACATGGTTGGTAAAATGCTCACACATCATTTTGGAACGGGTGTTTACACCAAACAGTGAGGATGTCATTTTTGTACGCCCTAGTAATGGGGTTTCTCTACCCAATTTTTTTATAATTGATAAGTATGTAACGTTAAGATGATCCTATTCCCCAGATCACTTTTACCCACCTGGTGTGTGTGGTAGCAGCGACAGCAAGCATAATGTTTCGATTCGGTTTTGTATGTTTTATCAAACTAATTCAAAAATTAAAAAAAAATACCTTTCCATTTTCTCGCCGTCGCAAAAGATTGATGCTCAAACCGAACAGCCTGCAGCATAAGATCAGTCGACTTCTTCTCTGTCGTTTAATAGTAAATTACAAGCCTATTTTCCTCGCCGAGGCTTTACCGGTGAAGCCAGTACAAGTATGGGGGCGGGGAAGCAACACAACAAAACAAACAAAACAGTGTTAACTAAAAGGATA] [+] EMBL BX611091 [GGTATTGAGGGCTTCGATTCACCTTTAAATCTTGTAACAATTCCCACGATTAAATGGTTTTCAACGTTTCAAACGAAAATCGTTAACACTTCAAAACTTGAAACATATCAGAATAGTAACATGGTTGGTAAAATGCTCACACATCATTTTGGAACGGGTGTTTACACCAAACAGTGAGGATGTCATTTTTGTACGCCCTAGTAATGGGGTTTCTCTACCCAATTTTTTTATAATTGATAAGTATGTAACGTTAAGATGATCCTATTCCCCAGATCACTTTTACCCACCTGGTGTGTGTGGTAGCAGCGACAGCAAGCATAATGTTTCGATTCGGTTTTGTATGTTTTATCAAACTAATTCAAAAATTAAAAAAAAATACCTTTCCATTTTCTCGCCGTCGCAAAAGATTGATGCTCAAACCGAACAGCCTGCAGCATAAGATCAGTCGACTTCTTCTCTGTCGTTTAATAGTAAATTACAAGCCTATTTTCCTCGCCGAGGCTTTACCGGTGAAGCCAGTACAAGTATGGGGGCGGGGAAGCAACACAACAAAACAAACAAAACAGTGTTAACTAAAAGGATA] consensusID : consensus_2965#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 144 fasta sequence [CTCTCGGGCGTGTAATAGTAAATGACAAGCCTATGTCCCTCGCCGAGGCTTTACCGGTGAAGCCAGTACAAGTATGGGGGCGGGGAAGCAACACAACAAAACAAACAAAACAGGGGCAACTAAAAGGAGATAAAGGAAGGAGGA] [+] EMBL BX610244 [CTCTCGGGCGTGTAATAGTAAATGACAAGCCTATGTCCCTCGCCGAGGCTTTACCGGTGAAGCCAGTACAAGTATGGGGGCGGGGAAGCAACACAACAAAACAAACAAAACAGGGGCAACTAAAAGGAGATAAAGGAAGGAGGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2965#0 GGTATTGAGGGCTTCGATTCACCTTTAAATCTTGTAACAATTCCCACGATTAAATGGTTT 60 consensus_2965#1 ------------------------------------------------------------ consensus_2965#0 TCAACGTTTCAAACGAAAATCGTTAACACTTCAAAACTTGAAACATATCAGAATAGTAAC 120 consensus_2965#1 ------------------------------------------------------------ consensus_2965#0 ATGGTTGGTAAAATGCTCACACATCATTTTGGAACGGGTGTTTACACCAAACAGTGAGGA 180 consensus_2965#1 ------------------------------------------------------------ consensus_2965#0 TGTCATTTTTGTACGCCCTAGTAATGGGGTTTCTCTACCCAATTTTTTTATAATTGATAA 240 consensus_2965#1 ------------------------------------------------------------ consensus_2965#0 GTATGTAACGTTAAGATGATCCTATTCCCCAGATCACTTTTACCCACCTGGTGTGTGTGG 300 consensus_2965#1 ------------------------------------------------------------ consensus_2965#0 TAGCAGCGACAGCAAGCATAATGTTTCGATTCGGTTTTGTATGTTTTATCAAACTAATTC 360 consensus_2965#1 ------------------------------------------------------------ consensus_2965#0 AAAAATTAAAAAAAAATACCTTTCCATTTTCTCGCCGTCGCAAAAGATTGATGCTCAAAC 420 consensus_2965#1 ------------------------------------------------------------ consensus_2965#0 CGAACAGCCTGCAGCATAAGATCAGTCGACTTCTTCTCTGTCGTTTAATAGTAAATTACA 480 consensus_2965#1 ---------------------------------CTCTCGGGCGTGTAATAGTAAATGACA 27 **** * *** *********** *** consensus_2965#0 AGCCTATTTTCCTCGCCGAGGCTTTACCGGTGAAGCCAGTACAAGTATGGGGGCGGGGAA 540 consensus_2965#1 AGCCTATGTCCCTCGCCGAGGCTTTACCGGTGAAGCCAGTACAAGTATGGGGGCGGGGAA 87 ******* * ************************************************** consensus_2965#0 GCAACACAACAAAACAAACAAAACAGTGTTAACTAAAAGGATA-------------- 583 consensus_2965#1 GCAACACAACAAAACAAACAAAACAGGGGCAACTAAAAGGAGATAAAGGAAGGAGGA 144 ************************** * *********** * |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||