These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2989#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 498 fasta sequence [CCGGGAGATGCGTATCAACATTCAGAGGCTAACAGAGATGGGCTACCCGGAACAGAGCGCCCGGCTTGCGCTGGAAATTTGCGCCAACATTCCGGACCGGGCCGTCGAGTACCTGCTGTCGGAGATGGGCGGCGGCAGCGACATGTCGTTCGCGCTGACAGCCGCCGCCCAGCTGCAGCAGCAGCAGCAGCAGCAGCAGGGACAGGGTGCCGGTATCGGTGGTGCGGCGGCGGCCCAGTCGGGCGACGCCAACCCGCTCGCCTTCCTGCGCGACAATCCCGTGTTCGAGGACATGCGCCGCATCCTGCGGGACGATCCGTCGATGCTGCCGTACCTGATGCGCCGGATGCAGGCGAGCAACCCGGACCTGCTGAACATCATAGCCGAGTATCAGGACGAGTTTCTGGCGCTGATCAACGAGGGCAGCAACGCGGGCGGCCAGCCGGCCGGCCAGCCGATGTCGCGCGAGCTGGAGAGCATTGCGGCGGCGATGGTCAA] [+] EMBL BM593608 [CCGGGAGATGCGTATCAACATTCAGAGGCTAACAGAGATGGGCTACCCGGAACAGAGCGCCCGGCTTGCGCTGGAAATTTGCGCCAACATTCCGGACCGGGCCGTCGAGTACCTGCTGTCGGAGATGGGCGGCGGCAGCGACATGTCGTTCGCGCTGACAGCCGCCGCCCAGCTGCAGCAGCAGCAGCAGCAGCAGCAGGGACAGGGTGCCGGTATCGGTGGTGCGGCGGCGGCCCAGTCGGGCGACGCCAACCCGCTCGCCTTCCTGCGCGACAATCCCGTGTTCGAGGACATGCGCCGCATCCTGCGGGACGATCCGTCGATGCTGCCGTACCTGATGCGCCGGATGCAGGCGAGCAACCCGGACCTGCTGAACATCATAGCCGAGTATCAGGACGAGTTTCTGGCGCTGATCAACGAGGGCAGCAACGCGGGCGGCCAGCCGGCCGGCCAGCCGATGTCGCGCGAGCTGGAGAGCATTGCGGCGGCGATGGTCAA] consensusID : consensus_2989#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 317 fasta sequence [AGAATCGGCACGAGGGTTTGATCCGTCGATCTGCCGTACTCGATGCGCCGGATGCAGGCGAGCAACCCGGACCTGCTGAACATCATAGCCGAGTATCAGGACGAGTTTCTGGCGCTGATCAACGAGGGCAGCAACGCGGGCGGCCAGCCGGCCGGCCAGCCGATGTCGCGCGAGCTGGAGAGCATTGCGGCGGCGATAGTCAACAGCCTGACGCCGTCGGACATGGACGCGATCGAGCGGCTGAAAGGCGCTCGGCTACCCGGAGCACCTCGTCATCCAGGCGTACATTGCGTGCGAGCGGGACGAGTACAGATGCG] [+] EMBL BX469398 [AGAATCGGCACGAGGGTTTGATCCGTCGATCTGCCGTACTCGATGCGCCGGATGCAGGCGAGCAACCCGGACCTGCTGAACATCATAGCCGAGTATCAGGACGAGTTTCTGGCGCTGATCAACGAGGGCAGCAACGCGGGCGGCCAGCCGGCCGGCCAGCCGATGTCGCGCGAGCTGGAGAGCATTGCGGCGGCGATAGTCAACAGCCTGACGCCGTCGGACATGGACGCGATCGAGCGGCTGAAAGGCGCTCGGCTACCCGGAGCACCTCGTCATCCAGGCGTACATTGCGTGCGAGCGGGACGAGTACAGATGCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2989#0 CCGGGAGATGCGTATCAACATTCAGAGGCTAACAGAGATGGGCTACCCGGAACAGAGCGC 60 consensus_2989#1 ------------------------------------------------------------ consensus_2989#0 CCGGCTTGCGCTGGAAATTTGCGCCAACATTCCGGACCGGGCCGTCGAGTACCTGCTGTC 120 consensus_2989#1 ------------------------------------------------------------ consensus_2989#0 GGAGATGGGCGGCGGCAGCGACATGTCGTTCGCGCTGACAGCCGCCGCCCAGCTGCAGCA 180 consensus_2989#1 ------------------------------------------------------------ consensus_2989#0 GCAGCAGCAGCAGCAGCAGGGACAGGGTGCCGGTATCGGTGGTGCGGCGGCGGCCCAGTC 240 consensus_2989#1 ------------------------------------------------------------ consensus_2989#0 GGGCGACGCCAACCCGCTCGCCTTCCTGCGCGACAATCCCGTGTTCGAGGACATGCGCCG 300 consensus_2989#1 ----------------------------------------------------AGAATCGG 8 * * * consensus_2989#0 CATCCTGCGGGACGATCCGTCGATGCTGCCGTACCTGATGCGCCGGATGCAGGCGAGCAA 360 consensus_2989#1 CA--CGAGGGTTTGATCCGTCGAT-CTGCCGTACTCGATGCGCCGGATGCAGGCGAGCAA 65 ** * ** *********** ********* ************************ consensus_2989#0 CCCGGACCTGCTGAACATCATAGCCGAGTATCAGGACGAGTTTCTGGCGCTGATCAACGA 420 consensus_2989#1 CCCGGACCTGCTGAACATCATAGCCGAGTATCAGGACGAGTTTCTGGCGCTGATCAACGA 125 ************************************************************ consensus_2989#0 GGGCAGCAACGCGGGCGGCCAGCCGGCCGGCCAGCCGATGTCGCGCGAGCTGGAGAGCAT 480 consensus_2989#1 GGGCAGCAACGCGGGCGGCCAGCCGGCCGGCCAGCCGATGTCGCGCGAGCTGGAGAGCAT 185 ************************************************************ consensus_2989#0 TGCGGCGGCGATGGTCAA------------------------------------------ 498 consensus_2989#1 TGCGGCGGCGATAGTCAACAGCCTGACGCCGTCGGACATGGACGCGATCGAGCGGCTGAA 245 ************ ***** consensus_2989#0 ------------------------------------------------------------ consensus_2989#1 AGGCGCTCGGCTACCCGGAGCACCTCGTCATCCAGGCGTACATTGCGTGCGAGCGGGACG 305 consensus_2989#0 ------------ consensus_2989#1 AGTACAGATGCG 317 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||