These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3033#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 481 fasta sequence [GGCAAGAATTCGGCACGNTGGGGAGTGGCTTGTTTGCGACACCGGCCGGTCGTAGAAAGCTGCAAGAATCGGCCAAGTTTGATCGACTTGCAATCGTAACGCTTCACCGGGGACACGTGTACACCGATCTGGAAGCGGTCAAGGCGGAACTAGCGGAGAGTGTAAAATCACTCGCACCACAACAAGTGTTGCAGAGCGCATCGATACCGTACCTCTCGATCGGTGCGGAAGTAGGCCGCCGGGAAACGATCCACACCGGCCGCAGCGAACTGTCCGGTGAGTACGTGGTGGAGGAGATTGCCGGCGAGAATGGGCGCCTGTTCCGGCGGCTCGTCTTCCTCTCCAACCAAGCGGTGGTACAGTCGGAGGCGGCACTCAAAATGGCCCGCGTGCGTGGCAGCCGTGCGCCACAGAAGGTGATCGATGCGGGCTATCTGGCCTGNCAGGCGATCATCTCTTCATGACNGGTCAGGCGTACAGC] [+] EMBL BX469832 [GGCAAGAATTCGGCACGNTGGGGAGTGGCTTGTTTGCGACACCGGCCGGTCGTAGAAAGCTGCAAGAATCGGCCAAGTTTGATCGACTTGCAATCGTAACGCTTCACCGGGGACACGTGTACACCGATCTGGAAGCGGTCAAGGCGGAACTAGCGGAGAGTGTAAAATCACTCGCACCACAACAAGTGTTGCAGAGCGCATCGATACCGTACCTCTCGATCGGTGCGGAAGTAGGCCGCCGGGAAACGATCCACACCGGCCGCAGCGAACTGTCCGGTGAGTACGTGGTGGAGGAGATTGCCGGCGAGAATGGGCGCCTGTTCCGGCGGCTCGTCTTCCTCTCCAACCAAGCGGTGGTACAGTCGGAGGCGGCACTCAAAATGGCCCGCGTGCGTGGCAGCCGTGCGCCACAGAAGGTGATCGATGCGGGCTATCTGGCCTGNCAGGCGATCATCTCTTCATGACNGGTCAGGCGTACAGC] consensusID : consensus_3033#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 458 fasta sequence [AGAATCCCCCGAGGTTACAACCGACAAGGAGCGACCACGCTACACTGATCCACGTGCTCGACCAGTGCACCGAAGAGGGGTAACGGCAAATACGCCGCCTTCATTGTACCTGCANGGCCGTGAAACGGAGTGGCTGTTTTGCGACACCGGTCGGTCGTAGAAAGCTGCAAGAATCGGCCAAGTTTGATCGACTTGCAATCGTAACGCTTCACCGGTGGACACGTGTACACCGATCTGGCAAGCGGTCAAGGCGGAACTAGCGGAGAGCTGTACAAATCATTCGCACCACAACAAGTGTTGCAGTAGCGCATCGATACCGTACCTCTCGATCGGTGCGGAAGTAGGCCGCCGTGGAAACGATCCACACCGGCCGCAGCGAACTGTCCGGTGAGTACGATGGTGGACGGAGATTNGCCGGCGAGCAACTGGGCGCCTGTTACCAGNGCGGCTCGTCCTTC] [+] EMBL AL933493 [AGAATCCCCCGAGGTTACAACCGACAAGGAGCGACCACGCTACACTGATCCACGTGCTCGACCAGTGCACCGAAGAGGGGTAACGGCAAATACGCCGCCTTCATTGTACCTGCANGGCCGTGAAACGGAGTGGCTGTTTTGCGACACCGGTCGGTCGTAGAAAGCTGCAAGAATCGGCCAAGTTTGATCGACTTGCAATCGTAACGCTTCACCGGTGGACACGTGTACACCGATCTGGCAAGCGGTCAAGGCGGAACTAGCGGAGAGCTGTACAAATCATTCGCACCACAACAAGTGTTGCAGTAGCGCATCGATACCGTACCTCTCGATCGGTGCGGAAGTAGGCCGCCGTGGAAACGATCCACACCGGCCGCAGCGAACTGTCCGGTGAGTACGATGGTGGACGGAGATTNGCCGGCGAGCAACTGGGCGCCTGTTACCAGNGCGGCTCGTCCTTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_3033#0 ------------------------------------------------------------ consensus_3033#1 AGAATCCCCCGAGGTTACAACCGACAAGGAGCGACCACGCTACACTGATCCACGTGCTCG 60 consensus_3033#0 --------------------------------------------GGCAAGAATTCGGC-A 15 consensus_3033#1 ACCAGTGCACCGAAGAGGGGTAACGGCAAATACGCCGCCTTCATTGTACCTGCANGGCCG 120 * * *** consensus_3033#0 CGNTGGGGAGTGGCTTGTTTGCGACACCGGCCGGTCGTAGAAAGCTGCAAGAATCGGCCA 75 consensus_3033#1 TGAAACGGAGTGGCTGTTTTGCGACACCGGTCGGTCGTAGAAAGCTGCAAGAATCGGCCA 180 * ********* ************* ***************************** consensus_3033#0 AGTTTGATCGACTTGCAATCGTAACGCTTCACCGG-GGACACGTGTACACCGATCTGG-A 133 consensus_3033#1 AGTTTGATCGACTTGCAATCGTAACGCTTCACCGGTGGACACGTGTACACCGATCTGGCA 240 *********************************** ********************** * consensus_3033#0 AGCGGTCAAGGCGGAACTAGCGGAGAG-TGTA-AAATCACTCGCACCACAACAAGTGTTG 191 consensus_3033#1 AGCGGTCAAGGCGGAACTAGCGGAGAGCTGTACAAATCATTCGCACCACAACAAGTGTTG 300 *************************** **** ****** ******************** consensus_3033#0 CAG-AGCGCATCGATACCGTACCTCTCGATCGGTGCGGAAGTAGGCCGCCG-GGAAACGA 249 consensus_3033#1 CAGTAGCGCATCGATACCGTACCTCTCGATCGGTGCGGAAGTAGGCCGCCGTGGAAACGA 360 *** *********************************************** ******** consensus_3033#0 TCCACACCGGCCGCAGCGAACTGTCCGGTGAGTACG-TGGTGGA-GGAGATTG-CCGGCG 306 consensus_3033#1 TCCACACCGGCCGCAGCGAACTGTCCGGTGAGTACGATGGTGGACGGAGATTNGCCGGCG 420 ************************************ ******* ******* ****** consensus_3033#0 AGAA--TGGGCGCCTGTTCC---GGCGGCTCGTCTTCCTCTCCAACCAAGCGGTGGTACA 361 consensus_3033#1 AGCAACTGGGCGCCTGTTACCAGNGCGGCTCGTCCTTC---------------------- 458 ** * ************ * ********** * * consensus_3033#0 GTCGGAGGCGGCACTCAAAATGGCCCGCGTGCGTGGCAGCCGTGCGCCACAGAAGGTGAT 421 consensus_3033#1 ------------------------------------------------------------ consensus_3033#0 CGATGCGGGCTATCTGGCCTGNCAGGCGATCATCTCTTCATGACNGGTCAGGCGTACAGC 481 consensus_3033#1 ------------------------------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||