These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3041#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 418 fasta sequence [AATCGCCCGAGGTGATTTCCAGTTAGAGTCCAATTTTCAACATAATAAGTTCACTTCTCACAAGAAAGAGTCAAGCGTCAAGTGTCCCACAACTATGAGAACCCCTGGAAAACCCTGTACTTACTGCTGGATGCTTCTGTACATACCAATCCCGCTAACACAAACAAACAAAACAGAAACCCATTGCCTTGCACCTTTGCTAACGCTTTTAAACATTTCCAGTCGAGTTTTGCTCTTTTACGCATGCCAGGGAATATACAAATCATTTGCCTACTATACCTTTCTTTTAGTNTGTTTTGCCAAAGCGCTACAGCTTTTTCCGCAAAGTTGCTTAGTTCCGTTTGGAGTATGAAGAAAGGAGTTTGCGCAAAAAAAACATTGTTGCCGAAAAGAACCACCCAGTAAATAGGAATTGAAA] [+] EMBL AL932565 [AATCGCCCGAGGTGATTTCCAGTTAGAGTCCAATTTTCAACATAATAAGTTCACTTCTCACAAGAAAGAGTCAAGCGTCAAGTGTCCCACAACTATGAGAACCCCTGGAAAACCCTGTACTTACTGCTGGATGCTTCTGTACATACCAATCCCGCTAACACAAACAAACAAAACAGAAACCCATTGCCTTGCACCTTTGCTAACGCTTTTAAACATTTCCAGTCGAGTTTTGCTCTTTTACGCATGCCAGGGAATATACAAATCATTTGCCTACTATACCTTTCTTTTAGTNTGTTTTGCCAAAGCGCTACAGCTTTTTCCGCAAAGTTGCTTAGTTCCGTTTGGAGTATGAAGAAAGGAGTTTGCGCAAAAAAAACATTGTTGCCGAAAAGAACCACCCAGTAAATAGGAATTGAAA] consensusID : consensus_3041#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 335 fasta sequence [GGCAGAATCGGCACGAGGNAGCAGCTACAGCTTTTTCCGCAAAGTTGCTTAGTTCCCGTTTGGAGTATGAAGAAAGGAGTTTGCGCAAAAAAAACATTGTTGCCGAAAAGAACCACCCAGTAAGATAGGAATTGAAAAACAGAGGAGAGCTTTTGTTTCTATGTATAGAACGAAGCAAAACTAACTCACGCTTGCACAGGAAAACGAAAAACAATGAGACAANAACATGGTACAAAANANAAGCTTAGCCGCAGGCGTAGGGAACGATGCAGTGAAACAAATCCTACTANACTCCGGATACAATATGGAGAACAATATTTTNTGTATACACGTGT] [+] EMBL BX469405 [GGCAGAATCGGCACGAGGNAGCAGCTACAGCTTTTTCCGCAAAGTTGCTTAGTTCCCGTTTGGAGTATGAAGAAAGGAGTTTGCGCAAAAAAAACATTGTTGCCGAAAAGAACCACCCAGTAAGATAGGAATTGAAAAACAGAGGAGAGCTTTTGTTTCTATGTATAGAACGAAGCAAAACTAACTCACGCTTGCACAGGAAAACGAAAAACAATGAGACAANAACATGGTACAAAANANAAGCTTAGCCGCAGGCGTAGGGAACGATGCAGTGAAACAAATCCTACTANACTCCGGATACAATATGGAGAACAATATTTTNTGTATACACGTGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_3041#0 AATCGCCCGAGGTGATTTCCAGTTAGAGTCCAATTTTCAACATAATAAGTTCACTTCTCA 60 consensus_3041#1 -----------------------------------------------GGCAGAATCGGCA 13 * * * ** consensus_3041#0 CAAGAAAGAGTCAAGCGTCAAGTGTCCCACAACTATGAGAACCCCTGGAAAACCCTGTAC 120 consensus_3041#1 CGAGGNAGCAGCTA-CAGCTTTTTCCGCAAAGTTGCTTAGTTCCCGTTTGGA----GTAT 68 * ** ** * * * * * * ** * * *** * *** consensus_3041#0 TTACTGCTGGATGCTTCTGTACATACCAATCCCGCTAACACAAACAAACAAAACAGAAAC 180 consensus_3041#1 GAAGAAAGGAGTTTGCGCAAAAAAAACATTGTTGCCGAAAAGAACCACCCAGTAAGATAG 128 * * * * * * ** * ** * * *** * * * *** * consensus_3041#0 CCATTGCCTTGCACCTTTGCTAACGCTTTTAAACATTTCCAGTCGAGTTTTGCTCTTTTA 240 consensus_3041#1 GAATTGAAAAACAGAGGAGAGCTTTTGTTTCTATGTATAGAACGAAGCAAAACTAACTCA 188 **** ** * *** * * * * ** ** * * consensus_3041#0 CGCATGC-CAGGGAATATACAAATCATTTGCCTACTATACCTTTCTTTTAGTNTGTTTTG 299 consensus_3041#1 CGCTTGCACAGGAAAACGAAAAACAATGAGACAANAACATGGTACAAAANANAAGCTTAG 248 *** *** **** ** * *** ** * * * * * * * * ** * consensus_3041#0 CCA-AAGCGCTACAGCTTTTTCCGCAAAGT------TGCTTAGTTCCGTTTGGAGTATGA 352 consensus_3041#1 CCGCAGGCGTAGGGAACGATGCAGTGAAACAAATCCTACTANACTCCGGATACAATATGG 308 ** * *** * * * ** * ** **** * * **** consensus_3041#0 AGAAAGGAGTTTGCGCAAAAAAAACATTGTTGCCGAAAAGAACCACCCAGTAAATAGGAA 412 consensus_3041#1 AGAACAATATTTTNTGTATACACGTGT--------------------------------- 335 **** *** * * * * consensus_3041#0 TTGAAA 418 consensus_3041#1 ------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||