These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3058#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 461 fasta sequence [AATCCCCCGAGGTTAAGTGTTTTGGCGCTGTATCATTAACGCGCTGTTCCATTCGATGATACTGTTTTGGTTGTCGTACAAGATCTACGAAAAGGATGTCATCTGGAAGAACGGACGCGATGGTGGATATTTAGTGTTAGGCAACATAGTTTACACGTACGTAGTCGTGACGGTGTGCTTGAAGGCGGGTCTTCTTACCAACTCGTGGACCTGGTTGACCCATTGTTCTATTTGGGGCTCGATACTGCTTTGGTTTATATTTATATTCATTTACAGCAACATTTGGCCAGCATTACCAGTGGGTGCGGTTTTCACGGGCATGGACGATATGGTCTTTACGACGCCAGTGTTCTGGGCTGGACTACTGTTAATTCCACTATCCGCACTGCTTTTCGACGTGTCTTGGAACGCGTACAGAAACTCTAGAAAGGATAATATACTAACACCACCACTGAAGGAAT] [+] EMBL AL932265 [AATCCCCCGAGGTTAAGTGTTTTGGCGCTGTATCATTAACGCGCTGTTCCATTCGATGATACTGTTTTGGTTGTCGTACAAGATCTACGAAAAGGATGTCATCTGGAAGAACGGACGCGATGGTGGATATTTAGTGTTAGGCAACATAGTTTACACGTACGTAGTCGTGACGGTGTGCTTGAAGGCGGGTCTTCTTACCAACTCGTGGACCTGGTTGACCCATTGTTCTATTTGGGGCTCGATACTGCTTTGGTTTATATTTATATTCATTTACAGCAACATTTGGCCAGCATTACCAGTGGGTGCGGTTTTCACGGGCATGGACGATATGGTCTTTACGACGCCAGTGTTCTGGGCTGGACTACTGTTAATTCCACTATCCGCACTGCTTTTCGACGTGTCTTGGAACGCGTACAGAAACTCTAGAAAGGATAATATACTAACACCACCACTGAAGGAAT] consensusID : consensus_3058#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 397 fasta sequence [GCTCAGCAGAATCGCCACGAGGTCTATNGTGGATATTTAGTGTTAGGCCAACATAGTTTACACGTACGTAGTCGTGACGGTGTGCTTGAAGGCGGGTCTTCTTACCAACTCGTGGACCTGGTTGACCCATTGTTCTATTTGGGGCTCGATACTGCTTTGGTTTATATTTATATTCATTTACAGCAACATTTGGCCAGCATTACCAGTGGGTGCGGTTTTCACGGGCATGGACGATATGGTCTTTACGACGCCAGTGTTCTGGGCTGGACTACTGTGTAATTCCAGCTATCCGCACTGCTTTTCGACGTGTCTTGGAACGCGTACAGAAACTCTAGAAAGGATAATATACTAACACCAGNCGACTGAAGGAATCCAGATCTTCAGAGACCGAAGGCAT] [+] EMBL BX466464 [GCTCAGCAGAATCGCCACGAGGTCTATNGTGGATATTTAGTGTTAGGCCAACATAGTTTACACGTACGTAGTCGTGACGGTGTGCTTGAAGGCGGGTCTTCTTACCAACTCGTGGACCTGGTTGACCCATTGTTCTATTTGGGGCTCGATACTGCTTTGGTTTATATTTATATTCATTTACAGCAACATTTGGCCAGCATTACCAGTGGGTGCGGTTTTCACGGGCATGGACGATATGGTCTTTACGACGCCAGTGTTCTGGGCTGGACTACTGTGTAATTCCAGCTATCCGCACTGCTTTTCGACGTGTCTTGGAACGCGTACAGAAACTCTAGAAAGGATAATATACTAACACCAGNCGACTGAAGGAATCCAGATCTTCAGAGACCGAAGGCAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_3058#0 AATCCCCCGAGGTTAAGTGTTTTGGCGCTGTATCATTAACGCGCTGTTCCATTCGATGAT 60 consensus_3058#1 ------------------------------------------------------------ consensus_3058#0 ACTGTTTTGGTTGTCGTACAAGATCTACGAAAAGGATGTCATCTGGAAGA--ACGGACGC 118 consensus_3058#1 ------------------------------------GCTCAGCAGAATCGCCACGAGGTC 24 *** * * * *** * consensus_3058#0 GATGGTGGATATTTAGTGTTAGGC-AACATAGTTTACACGTACGTAGTCGTGACGGTGTG 177 consensus_3058#1 TATNGTGGATATTTAGTGTTAGGCCAACATAGTTTACACGTACGTAGTCGTGACGGTGTG 84 ** ******************** *********************************** consensus_3058#0 CTTGAAGGCGGGTCTTCTTACCAACTCGTGGACCTGGTTGACCCATTGTTCTATTTGGGG 237 consensus_3058#1 CTTGAAGGCGGGTCTTCTTACCAACTCGTGGACCTGGTTGACCCATTGTTCTATTTGGGG 144 ************************************************************ consensus_3058#0 CTCGATACTGCTTTGGTTTATATTTATATTCATTTACAGCAACATTTGGCCAGCATTACC 297 consensus_3058#1 CTCGATACTGCTTTGGTTTATATTTATATTCATTTACAGCAACATTTGGCCAGCATTACC 204 ************************************************************ consensus_3058#0 AGTGGGTGCGGTTTTCACGGGCATGGACGATATGGTCTTTACGACGCCAGTGTTCTGGGC 357 consensus_3058#1 AGTGGGTGCGGTTTTCACGGGCATGGACGATATGGTCTTTACGACGCCAGTGTTCTGGGC 264 ************************************************************ consensus_3058#0 TGGACTACTGT-TAATTCCA-CTATCCGCACTGCTTTTCGACGTGTCTTGGAACGCGTAC 415 consensus_3058#1 TGGACTACTGTGTAATTCCAGCTATCCGCACTGCTTTTCGACGTGTCTTGGAACGCGTAC 324 *********** ******** *************************************** consensus_3058#0 AGAAACTCTAGAAAGGATAATATACTAACACCACC--ACTGAAGGAAT------------ 461 consensus_3058#1 AGAAACTCTAGAAAGGATAATATACTAACACCAGNCGACTGAAGGAATCCAGATCTTCAG 384 ********************************* *********** consensus_3058#0 ------------- consensus_3058#1 AGACCGAAGGCAT 397 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||