These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3082#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 391 fasta sequence [TGTAGCGGCAATGGAATGCAATGGATTGATAAAAACAACGTGATTAGTTAACCAAAATCCAAGCATTCGATGCACGCGTAGTATGAATACGCGTACGATACGGATATTACGAGCAATGAATAGCACAGGGAAGGACGTGTGGAGAAAGATGTGGAAGAGAGATAGATCGAGCGAGGCATAAAAGTAATAAATAAATAGTGAAATAGTCATGTGATGTGTATTTGATATAGAGAGAGAGTTACAAAATGAAAGTAAGACATAACTATAAACAAATGATTTAACATAACAGTAACCAATTCACATTTACAAAACGATAAATTCCGCGTTAGTAATCAATGGCAAACAAAGCAAACTGTAGAACTGTACTCGGAAGAAGCAAAGGTGCAACAAA] [+] EMBL BX617452 [TGTAGCGGCAATGGAATGCAATGGATTGATAAAAACAACGTGATTAGTTAACCAAAATCCAAGCATTCGATGCACGCGTAGTATGAATACGCGTACGATACGGATATTACGAGCAATGAATAGCACAGGGAAGGACGTGTGGAGAAAGATGTGGAAGAGAGATAGATCGAGCGAGGCATAAAAGTAATAAATAAATAGTGAAATAGTCATGTGATGTGTATTTGATATAGAGAGAGAGTTACAAAATGAAAGTAAGACATAACTATAAACAAATGATTTAACATAACAGTAACCAATTCACATTTACAAAACGATAAATTCCGCGTTAGTAATCAATGGCAAACAAAGCAAACTGTAGAACTGTACTCGGAAGAAGCAAAGGTGCAACAAA] consensusID : consensus_3082#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 261 fasta sequence [TGTAGCGGCAAGGGAAGGCAATGGATAGAAAAAAACAACGTGATGAGTGAACCAAAATCCAAGCATTCGAGGCACGCGTAGTATGAATACGCGTACGAAACGGATATTACGAGCAATGAATAGCACAGGGAAGGACGTGGGGAGAAAGAAGTGGAAGAGAGAAAGATCGAGCGAGGCATAAAAGGAAAAAAAAAAAAGGGAAAAAGCCAGGTGAAGTGGAATGGAAATAGAGAGAGAGGCACAAAATGAAAGGAAGACATA] [+] EMBL BX611464 [TGTAGCGGCAAGGGAAGGCAATGGATAGAAAAAAACAACGTGATGAGTGAACCAAAATCCAAGCATTCGAGGCACGCGTAGTATGAATACGCGTACGAAACGGATATTACGAGCAATGAATAGCACAGGGAAGGACGTGGGGAGAAAGAAGTGGAAGAGAGAAAGATCGAGCGAGGCATAAAAGGAAAAAAAAAAAAGGGAAAAAGCCAGGTGAAGTGGAATGGAAATAGAGAGAGAGGCACAAAATGAAAGGAAGACATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_3082#0 TGTAGCGGCAATGGAATGCAATGGATTGATAAAAACAACGTGATTAGTTAACCAAAATCC 60 consensus_3082#1 TGTAGCGGCAAGGGAAGGCAATGGATAGAAAAAAACAACGTGATGAGTGAACCAAAATCC 60 *********** **** ********* ** ************** *** *********** consensus_3082#0 AAGCATTCGATGCACGCGTAGTATGAATACGCGTACGATACGGATATTACGAGCAATGAA 120 consensus_3082#1 AAGCATTCGAGGCACGCGTAGTATGAATACGCGTACGAAACGGATATTACGAGCAATGAA 120 ********** *************************** ********************* consensus_3082#0 TAGCACAGGGAAGGACGTGTGGAGAAAGATGTGGAAGAGAGATAGATCGAGCGAGGCATA 180 consensus_3082#1 TAGCACAGGGAAGGACGTGGGGAGAAAGAAGTGGAAGAGAGAAAGATCGAGCGAGGCATA 180 ******************* ********* ************ ***************** consensus_3082#0 AAAGTAATAAATAAATAGTGAAATAGTCATGTGATGTGTATTTGATATAGAGAGAGAGTT 240 consensus_3082#1 AAAGGAAAAAAAAAAAAGGGAAAAAGCCAGGTGAAGTGGAATGGAAATAGAGAGAGAGGC 240 **** ** *** *** ** **** ** ** **** *** * * ** ************ consensus_3082#0 ACAAAATGAAAGTAAGACATAACTATAAACAAATGATTTAACATAACAGTAACCAATTCA 300 consensus_3082#1 ACAAAATGAAAGGAAGACATA--------------------------------------- 261 ************ ******** consensus_3082#0 CATTTACAAAACGATAAATTCCGCGTTAGTAATCAATGGCAAACAAAGCAAACTGTAGAA 360 consensus_3082#1 ------------------------------------------------------------ consensus_3082#0 CTGTACTCGGAAGAAGCAAAGGTGCAACAAA 391 consensus_3082#1 ------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||