These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3084#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 524 fasta sequence [GAATCGGCACCAGGAGATTTACAGGTGTACGGCCATCTGGACGATTTCTGCAAGCTCTCGGACAACACGAAGGAAACGTACCTGCGCAAAGGGGAAACGAACCACGGCTACATCAAACCGGGCCAGGAGCGGTTCGACGGCAATCGAAGGACATCCGGCATACGTTCAACATCTGCACGCTGAAACCGGACGGCGGCCCGGNTACCGGACGAACCGCGTGCCCGGCTTCCGGGACCACGTGTCCGACCTGGCGACGGACTTCAAGCGCCTGTCGGCCCTGCTGCTGCAGGCGCTGGCCGTCGGGATGGAGCTGCCGTACGGGTACTTTCTCGAGAAGCACCGGCACATACTGGACGGCGAGGGCGAAAACCAGTCCACATTCCGGCGTGCTCTACTATCCGCCGCGTNATCGAGGACGACGGGAAGAATGAGCTGCTGCGCGGGACGTGCAAGTACAGCCAGCGAGCGCTTGCACCAAGGACGAGATCGACCTGTCCCTGCCCGAGGACTACCGTGCGAAGGTA] [+] EMBL BX466425 [GAATCGGCACCAGGAGATTTACAGGTGTACGGCCATCTGGACGATTTCTGCAAGCTCTCGGACAACACGAAGGAAACGTACCTGCGCAAAGGGGAAACGAACCACGGCTACATCAAACCGGGCCAGGAGCGGTTCGACGGCAATCGAAGGACATCCGGCATACGTTCAACATCTGCACGCTGAAACCGGACGGCGGCCCGGNTACCGGACGAACCGCGTGCCCGGCTTCCGGGACCACGTGTCCGACCTGGCGACGGACTTCAAGCGCCTGTCGGCCCTGCTGCTGCAGGCGCTGGCCGTCGGGATGGAGCTGCCGTACGGGTACTTTCTCGAGAAGCACCGGCACATACTGGACGGCGAGGGCGAAAACCAGTCCACATTCCGGCGTGCTCTACTATCCGCCGCGTNATCGAGGACGACGGGAAGAATGAGCTGCTGCGCGGGACGTGCAAGTACAGCCAGCGAGCGCTTGCACCAAGGACGAGATCGACCTGTCCCTGCCCGAGGACTACCGTGCGAAGGTA] consensusID : consensus_3084#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 367 fasta sequence [GCCAGAATCGCCACGAGGTGTAAAAAAGGCATCGCGCTGCTGGCTAAACCATGGCATCTCGGAGGATAAGATGAAGCAGGTGTACGGCCATCTGGACGATTTCTGCAAGCTCTCGGACAAGCACGAAGGAAACGTACCTGCGCAAAGGGGAAACGAACCACGGCTACATCAAACCGGGCCAGGAGCGGTTCGACGGCAAATCGAAGGACATCCGGCATACGTTCAACATCTGCACGCTGAAACCGGACGGCGGCCCGCTACCGGACGAACCGCTGCCCGGCTTCCGGGACCACGTGTCCGACCTGGCGACGGACTTCAAGCGCCTGTCGGCCCTGCATGCTGCAGGCGCTGGCCGGTCGGGATGGGA] [+] EMBL BX469111 [GCCAGAATCGCCACGAGGTGTAAAAAAGGCATCGCGCTGCTGGCTAAACCATGGCATCTCGGAGGATAAGATGAAGCAGGTGTACGGCCATCTGGACGATTTCTGCAAGCTCTCGGACAAGCACGAAGGAAACGTACCTGCGCAAAGGGGAAACGAACCACGGCTACATCAAACCGGGCCAGGAGCGGTTCGACGGCAAATCGAAGGACATCCGGCATACGTTCAACATCTGCACGCTGAAACCGGACGGCGGCCCGCTACCGGACGAACCGCTGCCCGGCTTCCGGGACCACGTGTCCGACCTGGCGACGGACTTCAAGCGCCTGTCGGCCCTGCATGCTGCAGGCGCTGGCCGGTCGGGATGGGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_3084#0 -----------------------------------------------------GAATCG- 6 consensus_3084#1 GCCAGAATCGCCACGAGGTGTAAAAAAGGCATCGCGCTGCTGGCTAAACCATGGCATCTC 60 * *** consensus_3084#0 GCACCAGGAGATTTA-CAGGTGTACGGCCATCTGGACGATTTCTGCAAGCTCTCGGACAA 65 consensus_3084#1 GGAGGATAAGATGAAGCAGGTGTACGGCCATCTGGACGATTTCTGCAAGCTCTCGGACAA 120 * * * **** * ******************************************** consensus_3084#0 -CACGAAGGAAACGTACCTGCGCAAAGGGGAAACGAACCACGGCTACATCAAACCGGGCC 124 consensus_3084#1 GCACGAAGGAAACGTACCTGCGCAAAGGGGAAACGAACCACGGCTACATCAAACCGGGCC 180 *********************************************************** consensus_3084#0 AGGAGCGGTTCGACGGCAA-TCGAAGGACATCCGGCATACGTTCAACATCTGCACGCTGA 183 consensus_3084#1 AGGAGCGGTTCGACGGCAAATCGAAGGACATCCGGCATACGTTCAACATCTGCACGCTGA 240 ******************* **************************************** consensus_3084#0 AACCGGACGGCGGCCCGGNTACCGGACGAACCGCGTGCCCGGCTTCCGGGACCACGTGTC 243 consensus_3084#1 AACCGGACGGCGGCCCG-CTACCGGACGAACCGC-TGCCCGGCTTCCGGGACCACGTGTC 298 ***************** *************** ************************* consensus_3084#0 CGACCTGGCGACGGACTTCAAGCGCCTGTCGGCCCTGC-TGCTGCAGGCGCTGGCCG-TC 301 consensus_3084#1 CGACCTGGCGACGGACTTCAAGCGCCTGTCGGCCCTGCATGCTGCAGGCGCTGGCCGGTC 358 ************************************** ****************** ** consensus_3084#0 GGGATGGAGCTGCCGTACGGGTACTTTCTCGAGAAGCACCGGCACATACTGGACGGCGAG 361 consensus_3084#1 GGGATGGGA--------------------------------------------------- 367 ******* consensus_3084#0 GGCGAAAACCAGTCCACATTCCGGCGTGCTCTACTATCCGCCGCGTNATCGAGGACGACG 421 consensus_3084#1 ------------------------------------------------------------ consensus_3084#0 GGAAGAATGAGCTGCTGCGCGGGACGTGCAAGTACAGCCAGCGAGCGCTTGCACCAAGGA 481 consensus_3084#1 ------------------------------------------------------------ consensus_3084#0 CGAGATCGACCTGTCCCTGCCCGAGGACTACCGTGCGAAGGTA 524 consensus_3084#1 ------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||