These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3103#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 636 fasta sequence [GACCCAACCCAGCTGCCCGCAAATGAGAAGTTTACTCGTGTTGGCTGTCCTCGTGACGGCCTCCCAGGCGTACTCGGTGTTCCAGAACCCACCGTGCTCGGGCACCACGCCCTGTCTGATCAACTGCGTGCAGAACTCGCGCTGCCCGATCTACAACCCGGCCAAGCCGGTCCTGCTTCCCGGCCCGACCTGCGACCGTTTCTACAAGTGCGAAAGTGGCCGCGCCTGCGAGACCCTCTGCCCGGGGGGTACCCACTTCAATGCCCGCGAGCAGGCGTGCGACTGGCCGCACCGTGCCTGTTGCGACCCGAACATTGAGTGCCGTCCGGATCCGTGCGGACCCAACGGTGACTGCGGAGGCGGTGGCGGTCCGATCATTCCACCACCCCCACCACCTCCACCACCGCCACCACCACCACAGCCCCCGTGCAGCGGTGGAGGCATCTGTGCCATCAACTGCCCCGTAGACAACCGTTGCCCGATGTTTGACGGCTTGAAGCCGACGCTCCTGCCCGGACCGAACTGTGGCGTGTACGCCAAGTGTATCGCTGGACGTGCCTGCCCGATGCAGTGCCCCGCTGGACTGCACTTCAATGCCGCCAAGCAGATCTGCGACTGGNCGNTCCAGGCTTGCTG] [+] EMBL BX620426 [GACCCAACCCAGCTGCCCGCAAATGAGAAGTTTACTCGTGTTGGCTGTCCTCGTGACGGCCTCCCAGGCGTACTCGGTGTTCCAGAACCCACCGTGCTCGGGCACCACGCCCTGTCTGATCAACTGCGTGCAGAACTCGCGCTGCCCGATCTACAACCCGGCCAAGCCGGTCCTGCTTCCCGGCCCGACCTGCGACCGTTTCTACAAGTGCGAAAGTGGCCGCGCCTGCGAGACCCTCTGCCCGGGGGGTACCCACTTCAATGCCCGCGAGCAGGCGTGCGACTGGCCGCACCGTGCCTGTTGCGACCCGAACATTGAGTGCCGTCCGGATCCGTGCGGACCCAACGGTGACTGCGGAGGCGGTGGCGGTCCGATCATTCCACCACCCCCACCACCTCCACCACCGCCACCACCACCACAGCCCCCGTGCAGCGGTGGAGGCATCTGTGCCATCAACTGCCCCGTAGACAACCGTTGCCCGATGTTTGACGGCTTGAAGCCGACGCTCCTGCCCGGACCGAACTGTGGCGTGTACGCCAAGTGTATCGCTGGACGTGCCTGCCCGATGCAGTGCCCCGCTGGACTGCACTTCAATGCCGCCAAGCAGATCTGCGACTGGNCGNTCCAGGCTTGCTG] consensusID : consensus_3103#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 274 fasta sequence [AATCCGCACGANNGGAGCATCTGTGCCATCAACTGCCCCGTAGACAACCGTTGCCCGATGTTTGACGGCTTGAAGCCGACGCTCCTGCCCGGACCGAACTGTGGCGTGTACGCCAAGTGTATCGCTGGACGTGCCTGCCCGATGCAGTGCCCCGCTGGACTGCACTTCAATGCCGCCAAGCAGATCTGCGACTGGCCGTTCCAGGCTTGCTGCGACCCGAACGTTGAGTGCCGCCCGGACCCATGCGGACCCAGCGGTTACTGCGGAGGCGGTG] [+] EMBL BX466473 [AATCCGCACGANNGGAGCATCTGTGCCATCAACTGCCCCGTAGACAACCGTTGCCCGATGTTTGACGGCTTGAAGCCGACGCTCCTGCCCGGACCGAACTGTGGCGTGTACGCCAAGTGTATCGCTGGACGTGCCTGCCCGATGCAGTGCCCCGCTGGACTGCACTTCAATGCCGCCAAGCAGATCTGCGACTGGCCGTTCCAGGCTTGCTGCGACCCGAACGTTGAGTGCCGCCCGGACCCATGCGGACCCAGCGGTTACTGCGGAGGCGGTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_3103#0 GACCCAACCCAGCTGCCCGCAAATGAGAAGTTTACTCGTGTTGGCTGTCCTCGTGACGGC 60 consensus_3103#1 ------------------------------------------------------------ consensus_3103#0 CTCCCAGGCGTACTCGGTGTTCCAGAACCCACCGTGCTCGGGCACCACGCCCTGTCTGAT 120 consensus_3103#1 ------------------------------------------------------------ consensus_3103#0 CAACTGCGTGCAGAACTCGCGCTGCCCGATCTACAACCCGGCCAAGCCGGTCCTGCTTCC 180 consensus_3103#1 ------------------------------------------------------------ consensus_3103#0 CGGCCCGACCTGCGACCGTTTCTACAAGTGCGAAAGTGGCCGCGCCTGCGAGACCCTCTG 240 consensus_3103#1 ------------------------------------------------------------ consensus_3103#0 CCCGGGGGGTACCCACTTCAATGCCCGCGAGCAGGCGTGCGACTGGCCGCACCGTGCCTG 300 consensus_3103#1 ------------------------------------------------------------ consensus_3103#0 TTGCGACCCGAACATTGAGTGCCGTCCGGATCCGTGCGGACCCAACGGTGACTGCGGAGG 360 consensus_3103#1 ------------------------------------------------------------ consensus_3103#0 CGGTGGCGGTCCGATCATTCCACCACCCCCACCACCTCCACCACCGCCACCACCACCACA 420 consensus_3103#1 -----------------------------------------------------------A 1 * consensus_3103#0 GCCCCCGTGCAGCGGTGGAGGCATCTGTGCCATCAACTGCCCCGTAGACAACCGTTGCCC 480 consensus_3103#1 ATCCGCA-----CGANNGGAGCATCTGTGCCATCAACTGCCCCGTAGACAACCGTTGCCC 56 ** * ** * **************************************** consensus_3103#0 GATGTTTGACGGCTTGAAGCCGACGCTCCTGCCCGGACCGAACTGTGGCGTGTACGCCAA 540 consensus_3103#1 GATGTTTGACGGCTTGAAGCCGACGCTCCTGCCCGGACCGAACTGTGGCGTGTACGCCAA 116 ************************************************************ consensus_3103#0 GTGTATCGCTGGACGTGCCTGCCCGATGCAGTGCCCCGCTGGACTGCACTTCAATGCCGC 600 consensus_3103#1 GTGTATCGCTGGACGTGCCTGCCCGATGCAGTGCCCCGCTGGACTGCACTTCAATGCCGC 176 ************************************************************ consensus_3103#0 CAAGCAGATCTGCGACTGGNCGNTCCAGGCTTGCTG------------------------ 636 consensus_3103#1 CAAGCAGATCTGCGACTGGCCGTTCCAGGCTTGCTGCGACCCGAACGTTGAGTGCCGCCC 236 ******************* ** ************* consensus_3103#0 -------------------------------------- consensus_3103#1 GGACCCATGCGGACCCAGCGGTTACTGCGGAGGCGGTG 274 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||