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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3188#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 805 fasta sequence
[TGCTCAACCGAGTTGGGGCAGCTGGTGGGTGGCAATCGTTCATTGGATGGTTTGACAAAAAACGAGCACCTATGTTTCCGCAGCGATCAATGGATAGTACCGGGTGTATGCGAGGATGTTCCTGGAGCACCAGTACTGCGTTACATAAATCGTGCTGGTGCCTTCTTTAAGTACGTATACGCGTTGACCGTTGCAGGACAGACTTGTGGCCATGGAATACCGACAATCGCTGTACAACTAGCCCCGCACGCCGCCTGGTTGCGATCCGTTATTCTCGACAAAAGTAACTCTGGTGGGCAGAAAGCTTCAGAATCAGTGATTATAATCAATCCGGATCTGAAACGAAGTGATGAATGCTGCAATGGGGATGGTACAATGGGTATTTGCGTACCGTATGCAATGTGCCTTAGCACTAAGGAACGCTTGCGTAAAGGTGAACGAGTGACACTTTGTACGGACGGTACGGTCGTTTGCTGTCCTTGGGGTGATATTGCGAGAAATTCTGGCGGTGATCTAATTCGCACCGAGCTCGACAGCTGTGAAAATCGTTATCATTCTTTACGCCGTCAACGCTATTCGGGATTTAGTCAAAACGAGTCCCTGTACAGCAATCTACCCCATGTAGCCGAAGTCGGTTGGCCTCAGAACAATGGAGGGATAGCGTTTGAGTGTTTTGGATATCTAATCACCTCCAGTATAGTAGTGACGAGTGCCCGTTGTTTGGAAACGTACTCCTACNAACCGGTAGTGGCACGAATTGGATCAGTGCAAGCCGCTGACTCATCGAACTACATTATCCAACTAT]
[+] EMBL BX623709 [TGCTCAACCGAGTTGGGGCAGCTGGTGGGTGGCAATCGTTCATTGGATGGTTTGACAAAAAACGAGCACCTATGTTTCCGCAGCGATCAATGGATAGTACCGGGTGTATGCGAGGATGTTCCTGGAGCACCAGTACTGCGTTACATAAATCGTGCTGGTGCCTTCTTTAAGTACGTATACGCGTTGACCGTTGCAGGACAGACTTGTGGCCATGGAATACCGACAATCGCTGTACAACTAGCCCCGCACGCCGCCTGGTTGCGATCCGTTATTCTCGACAAAAGTAACTCTGGTGGGCAGAAAGCTTCAGAATCAGTGATTATAATCAATCCGGATCTGAAACGAAGTGATGAATGCTGCAATGGGGATGGTACAATGGGTATTTGCGTACCGTATGCAATGTGCCTTAGCACTAAGGAACGCTTGCGTAAAGGTGAACGAGTGACACTTTGTACGGACGGTACGGTCGTTTGCTGTCCTTGGGGTGATATTGCGAGAAATTCTGGCGGTGATCTAATTCGCACCGAGCTCGACAGCTGTGAAAATCGTTATCATTCTTTACGCCGTCAACGCTATTCGGGATTTAGTCAAAACGAGTCCCTGTACAGCAATCTACCCCATGTAGCCGAAGTCGGTTGGCCTCAGAACAATGGAGGGATAGCGTTTGAGTGTTTTGGATATCTAATCACCTCCAGTATAGTAGTGACGAGTGCCCGTTGTTTGGAAACGTACTCCTACNAACCGGTAGTGGCACGAATTGGATCAGTGCAAGCCGCTGACTCATCGAACTACATTATCCAACTAT]
consensusID : consensus_3188#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 656 fasta sequence
[CCGCCCACGCGTCCGCCGAGCTCGACAGCTGTGAAAATCGTTATCATTCTTTACGTCGTCAACGCTATTCGGGATTTAGTCAAAACGAGTCCCTGTACAGCAATCTACCCCATGTAGTCGAAGTCGGTTGGCCTCAGAACAATGGAGGGATAGCGTTTGAGTGTTTTGGATATCTAATCACCTCCAGTATAATAGTGACGAGTGCCCGTTGTTTGGAAACGTACTCCTACAAACCGGTAGTGGCACGAATTGGATCAGTGCAAGCCGCTGACTCATCGAACTACATTATCCAAACTATTCGTCGGGTTCGTGTCCATGACGACTACGACTCGCAAACTGGTGCCAACAACATAGGGCTGCTAATTCTTGCAGCGCCGATAGAAATTAATGAATATCATTTCCCAGGATGTTTATATCGGAATAACACACATCTACCTACGCGACAGTTTGCTATAAGCGATGATCGAGATGCAACATTTTTATTGAAAGTATCGCCTATTTATCAGAGCGAGTGTCAGCAGCGTTTGACAGTGCCGCTCGTTTCTGGGCAGATGTGTCTACTGAAAGCTCAACCGGAAGGAGTGTACAATCCAAGAAATAAGTGCCTTAGAACTGGCGATTTGATTGTGTGGGAGCCTCGCACTGAGGAAGAGGAT]
[+] EMBL BM641048 [CCGCCCACGCGTCCGCCGAGCTCGACAGCTGTGAAAATCGTTATCATTCTTTACGTCGTCAACGCTATTCGGGATTTAGTCAAAACGAGTCCCTGTACAGCAATCTACCCCATGTAGTCGAAGTCGGTTGGCCTCAGAACAATGGAGGGATAGCGTTTGAGTGTTTTGGATATCTAATCACCTCCAGTATAATAGTGACGAGTGCCCGTTGTTTGGAAACGTACTCCTACAAACCGGTAGTGGCACGAATTGGATCAGTGCAAGCCGCTGACTCATCGAACTACATTATCCAAACTATTCGTCGGGTTCGTGTCCATGACGACTACGACTCGCAAACTGGTGCCAACAACATAGGGCTGCTAATTCTTGCAGCGCCGATAGAAATTAATGAATATCATTTCCCAGGATGTTTATATCGGAATAACACACATCTACCTACGCGACAGTTTGCTATAAGCGATGATCGAGATGCAACATTTTTATTGAAAGTATCGCCTATTTATCAGAGCGAGTGTCAGCAGCGTTTGACAGTGCCGCTCGTTTCTGGGCAGATGTGTCTACTGAAAGCTCAACCGGAAGGAGTGTACAATCCAAGAAATAAGTGCCTTAGAACTGGCGATTTGATTGTGTGGGAGCCTCGCACTGAGGAAGAGGAT]
[+] EMBL BM630422 [ AGTCAAAACGAGTCCCTGTACAGCAATCTACCCCATGTACTCGAAGTCGGTTGGCCTCAGAACAATGGAGGGATAGCGTTTGAGTGTTTTGGATATCTAATCACCTCCAGTATAATAGTGACGAGTGCCCGTTGTTTGGAAACGTACTCCTACAAACCGGTAGTGGCACGAATTGGATCAGTGCAAGCCGCTGACTCATCGAACTACATTATCCAAACTATTCGTCGGGTTCGTGTCCATGACGA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3188#0 -------TGC-TCAACCGAGTTGGGGCAGCTG-GTGGGTGGCAATCGTTCATTGGATGGT 51
consensus_3188#1 CCGCCCACGCGTCCGCCGAGCTCGA-CAGCTGTGAAAATCGTTATCATTCTTTACGTCGT 59
** ** ***** * * ****** * * * *** *** ** * **
consensus_3188#0 TTGACAAAAAACGAGCACCTATGTTTCCGCAGCGATCAATGGATAG-TACCGGGTGTATG 110
consensus_3188#1 C-AACGCTATTCGGGATTTAGTCAAAACGAGTCCCTGTACAGCAATCTACCCCATGTAGT 118
** * ** * * ** * * * * * **** ****
consensus_3188#0 CGAGGATGTTCCTGGAGCACCAGTACTGCGTTACATAAATCGTGCTGGTGCCTTCTTTAA 170
consensus_3188#1 CGAAGTCGGTT----GGCCTCAGAACAATG---GAGGGATAGCGTT--TGAGTGTTTTGG 169
*** * * * ** *** ** * * ** * * * ** * ***
consensus_3188#0 GTACGTATACGCGTTGACCGTTGCAGGACAGACTTGTGGCCATGGAATACCGACA-ATCG 229
consensus_3188#1 ATATCTAATCACCT---CCAGTATAATAGTGACGAGTGCCCGTTGTTTGGAAACGTACTC 226
** ** * * * ** * * * *** *** ** * * * ** *
consensus_3188#0 CTGTACAAC--TAGCCCCGCACGCCGCCTGGTTGCGATCCGTTATTCTCGACAAAAGTAA 287
consensus_3188#1 CTACAAACCGGTAGTGGCACGAATTGGATCAGTGCAAGCCGCT------GACTCATCGAA 280
** * * * *** * * * * *** * *** * *** * **
consensus_3188#0 CTCTGGTGGGCAGAAAGCTT-CAGAATCAGTGATTATAATCAATCCGGATCTGAAACGAA 346
consensus_3188#1 CTACATTATCCAAACTATTCGTCGGGTTCGTGTCCATGACGACTACGACTCGCAAAC--- 337
** * ** * * * * *** ** * * * ** ** ****
consensus_3188#0 GTGATGAATGCTGCAATGGGGATGGTACAATGGGTATTTGCGTACCGTATGCAATGTGCC 406
consensus_3188#1 -TGGTGCCAACAACA-TAGGGCTGCTAATTCTTGCAGC-GCCGATAGAAATTAATGAATA 394
** ** * ** * *** ** ** * * ** * * * ****
consensus_3188#0 TTAGCACTAAGGAACGCTTGCGTAAAGGTGAACGAGTGACACTTTGTACGGACGGTACGG 466
consensus_3188#1 TCATTTCCCAGGA-TGTTTATATCGGAAT-AACACACATCTACCTACGCG-ACAGTTTGC 451
* * * **** * ** * * *** * * ** ** ** *
consensus_3188#0 T-CGTTTGCTGTCCTTGGGGTGATATTGCGAGAAATTCTGGCGGTGATCTAATTCGCACC 525
consensus_3188#1 TATAAGCGATGATCGAGATGCAACATTTTTATTGAAAGTATCGCCTATTTA--TCAGAGC 509
* * ** * * * * *** * * * ** ** ** ** * *
consensus_3188#0 GAGC-TCGACAGCTGTGAAAATCGTTATCATTCTTTACGCCGTCAACGCTATTCGGGATT 584
consensus_3188#1 GAGTGTCAGCAGCGTTTGACAGTGCCGCTCGTTTCTGGGCAGATGTGTCTACTGAAAGCT 569
*** ** **** * * * * * * * ** * *** * *
consensus_3188#0 TAGTCAAAACGAGTCCCTGTACAGCAATCTACCCCATGTA-GCCGAAGTCGGTTGGCCTC 643
consensus_3188#1 CAACCGGAAGGAGT----GTAC---AATCCAAGAAATAAGTGCCTTAG--AACTGGCGAT 620
* * ** **** **** **** * ** *** ** ****
consensus_3188#0 AGAACAATGGAGGGATAGCGTTTGAGTGTTTTGGATATCTAATCACCTCCAGTATAGTAG 703
consensus_3188#1 TTGATTGTGTGGGAGCCTCGCACTGAGGAAGAGGAT------------------------ 656
* ** ** ** * ****
consensus_3188#0 TGACGAGTGCCCGTTGTTTGGAAACGTACTCCTACNAACCGGTAGTGGCACGAATTGGAT 763
consensus_3188#1 ------------------------------------------------------------
consensus_3188#0 CAGTGCAAGCCGCTGACTCATCGAACTACATTATCCAACTAT 805
consensus_3188#1 ------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||