These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3268#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 292 fasta sequence [CCGCTCGAATTTTATATATAATTAAATCTTTAAAATTCGAGAAAAATGTATTATAATAATTTATGATTTAATAAACCCTGAGACACAAGGTACAATAAATAATAAATTATTATAATAATGTTTCTCGAATTTTAAAGATTTAATTATATATAAAAGTTATTGTGGAATAACTATTGTTAAATATGTAATTAGAAATGAAATGCTCATCGTTTTAAAATATATCTAGTTCCTTAAGAAATGAATTTAATTTAGCTTATTTATTGGATTAAGTTAATTTTTTACTTTGATAATT] [+] EMBL BM588685 [CCGCTCGAATTTTATATATAATTAAATCTTTAAAATTCGAGAAAAATGTATTATAATAATTTATGATTTAATAAACCCTGAGACACAAGGTACAATAAATAATAAATTATTATAATAATGTTTCTCGAATTTTAAAGATTTAATTATATATAAAAGTTA ] [+] EMBL BM575072 [ TAAATTATTATAATAATTTTTCTCGAATTTTAAAGATTTAATTATATATAAAAGTTATTGTGGAATAACTATTGTTAAATATGTAATTAGAAATGAAATGCTCATCGTTTTAAAATATATCTAGTTCCTTAAGAAATGAATTTAATTTAGCTTATTTATTGGATTAAGTTAATTTTTTACTTTGATAATT] consensusID : consensus_3268#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 274 fasta sequence [GATGCCTGTTCGGGTGGTTCGTAGCCTTCCGGACGGTCGACGACGACACCGGAAGCTGCACCGGTCGACACTTCAGCAGCCTTGCCGCCGCCACCCCCGGGCAATTCCATCAGACGGGACAGATCGAATCGCGGCTCCTTCAGCACCTTCACCTGGCGGATGAAGACATCGGGCAGCGGGTACACGACCGGGCACGCCTTCTCGAAAACCTGGGCGAACGAGTGGGGCAGCAGCTCCCCCACCACACCCTTCAGATCCGGGCGGGGGAATCCAC] [+] EMBL CNS09GWF [GATGCCTGTTCGGGTGGTTCGTAGCCTTCCGGACGGTCGACGACGACACCGGAAGCTGCACCGGTCGACACTTCAGCAGCCTTGCCGCCGCCACCCCCGGGCAATTCCATCAGACGGGACAGATCGAATCGCGGCTCCTTCAGCACCTTCACCTGGCGGATGAAGACATCGGGCAGCGGGTACACGACCGGGCACGCCTTCTCGAAAACCTGGGCGAACGAGTGGGGCAGCAGCTCCCCCACCACACCCTTCAGATCCGGGCGGGGGAATCCAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_3268#0 -----CCGCTCGAATTTTATATATAATTA-AATCTTTAAAATTCGAGAAAAATGTATTAT 54 consensus_3268#1 GATGCCTGTTCGGGTGGTTCGTAGCCTTCCGGACGGTCGACGACGACACCGG-AAGCTGC 59 * * *** * * ** ** * * * *** * * consensus_3268#0 AATAATTTATGATTTAATAAACCCTGAGACACAAGGTACAATAAATAATAAATTATTATA 114 consensus_3268#1 ACCGGTCGACACTTCAGCAGCCTTGCCGCCGCCACCCCCGGGCAAT--TCCATCA----G 113 * * * ** * * * * * * * * *** * ** * consensus_3268#0 ATAATGTTTCTCGAATTTTAAAGATTTAATTATATATAAAAGTTATTGTGGAATAACTAT 174 consensus_3268#1 ACGGGACAGATCGAATCGCGGCTCCTTCAGCACCTTCACCTGGCGGATGAAGACATCGGG 173 * ****** ** * * * * * * * * consensus_3268#0 TGTTAAATATGTAATTAGAAATGAAATGCTCATCGTTTTAAAATATATCTAGTTCCTTAA 234 consensus_3268#1 CAGCGGGTACACGACCGGGCACGCCTTCTCGAAAACCTGGGCGAACGAGTGGGGC----A 229 ** * * * * * * * * * * * * consensus_3268#0 GAAATGAATTTAATTTAGCTTATTTATTGGATTAAGTTAATTTTTTACTTTGATAATT 292 consensus_3268#1 GCAGCTCCCCCACCACACCCTTCAGATCCGGGCGGGGGAATCCAC------------- 274 * * * * * * ** * * *** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||