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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3275#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 877 fasta sequence
[CCGCCCACGCGTCCGGCCGATCAGACTGATCGATTTCGCGATACGTTTCTGTTGCGTTGGGTCTGAAATTTTCAAATCCCAAGGAACGCTTTTAAGAACCCATACTTGTGGCTGCTATAACGCGACCTCGCTACCTCGTTTGCTTAAGTGTAGAATAAAATAGTGCTGTACGTTTCGTTGCCAAACGCGTGTTGCGGTGTACCATCTAGGGAAAGTTTACGATCATCTTCCGTCGCTGTTGCAGATACAAGGCATTTAATTTGTGTTTTACGTGATTGATATGGTTAGACGCTATTTTGCAGTCGTATGTTAGTACGGTCGTGGCAGTAGTTGGTGGTGTGCAAGGTTTTCACAACCTGGTGTGTCTCGCGCTCGTTCTTTCTATAGTTCAAAAAGCCGCTGGTGTCGAGTAAGCTGAAATGCAAGCAACGGTCTCGGAGGGAAACGGTCAGGGACCCAACAGCAGTAGCAGCAGCACCGGCCACAATCACAGCTCTTCTCCGAAACTGCCGCCACCCGGCTCGTGGGCATCGCTGAAGGCAAACGTGATAAGATGGCGCGGCTCACGGAAACTGGTACTCGTCATCGTCGCCATCGCACTCCTGCTCGACAATATGCTGCTGGACCGTCGTTGTGCCAATCATTCCGGAGTTTCTTTACGACATCAGACACCCGGATGCACCGCTGGCCAGCTTTCCCAAGACTCCGCCGACCACACCGTGCGAGAAGGAGGTGACGACACCGTACAATGGTATCGACGTTACAACGCAAGGTTACGATAATGCTAGCTGGTACGCGGAACGGGAGGAACGGCACAAGGAGCTGGTGGAGGAAACGGTCGAGGTTGGGCTTATGTTTGCCTCGAAAGCATTCGTCC]
[+] EMBL BM626367 [CCGCCCACGCGTCCGGCCGATCAGACTGATCGATTTCGCGATACGTTTCTGTTGCGTTGGGTCTGAAATTTTCAAATCCCAAGGAACGCTTTTAAGAACCCATACTTGTGGCTGCTATAACGCGACCTCGCTACCTCGTTTGCTTAAGTGTAGAATAAAATAGTGCTGTACGTTTCGTTGCCAAACGCGTGTTGCGGTGTACCATCTAGGGAAAGTTTACGATCATCTTCCGTCGCTGTTGCAGATACAAGGCATTTAATTTGTGTTTTACGTGATTGATATGGTTAGACGCTATTTTGCAGTCGTATGTTAGTACGGTCGTGGCAGTAGTTGGTGGTGTGCAAGGTTTTCACAACCTGGTGTGTCTCGCGCTCGTTCTTTCTATAGTTCAAAAAGCCGCTGGTGTCGAGTAAGCTGAAATGCAAGCAACGGTCTCGGAGGGAAACGGTCAGGGACCCAACAGCAGTAGCAGCAGCACCGGCCACAATCACAGCTCTTCTCCGAAACTGCCGCCACCCGGCTCGTGGGCATCGCTGAAGGCAAACGTGATAAGATGGCGCGGCTCACGGAAACTGGTACTCGTCATCGTCGCCATCGCACTCCTGCTCGACAATATGCTGCTGGACCGTCGTTGTGCCAATCATTCCGGAGTTTCTTTACGACATCAGACACCCGG ]
[+] EMBL BM628654 [ ccgTTACGATCATCTTCCGTCGCTGTTGCAGATACAAGGCATTTAATTTGTGTTTTACGTGATTGATATGGTTAGACGCTATTTTGCAGTCGTATGTTAGTACGGTCGTGGCAGTAGTTGGTGGTGTGCAAGATTGTGA AA GGCGGTGTCTCGCGCTCGTTCTTTCTATAGTTCAAAAAGCCGCTGGTGTCGAGTAAGCTGAAATGCAAGCAACGGTCTCGGAGGGAAACGGTCAGGGACCCAACAGCAGTAGCAGCAGCACCGGCCACAATCACAGCTCTTCTCCGAAACTGCCGCCACCCGGCTCGTGGGCATCGCTGAAGGCAAACGTGATAAGATGGCGCGGCTCACGGAAACTGGTACTCGTCATCGTCGCCATCGCACTCCTGCTCGACAATATGCTGCT GACCGTCGTTGTGCCAATCATTCCGGAGTTTCTTTACGACATCAGACACCCGGATGCACCGCTGGCCAGCTTTCCCAAGACTCCGCCGACCACACCGTGCGAGAAGGAGGTGACGACACCGTACAATGGTATCGACGTTACAACGCAAGGTTACGATAATGCTAGCTGGTACGCGGAACGGGAGGAACGGCACAAGGAGCTGGTGGAGGAAACGGTCGAGGTTGGGCTTATGTTTGCCTCGAAAGCATTCGTCC]
consensusID : consensus_3275#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 643 fasta sequence
[CCGCAGTGAGGCAGGCTCCTGGGTGAGTGCCGTTTCCGGTAGTGACGAATTTGCTGACTTCCATTTCAAGGAAGTAAACCACATACAGGCGACCTAATAAAACAGCGAACATTCGACGAAAAATTCCACAGAACCGCAGCCGTCGGGTATTCGAGCGGTACGGTACTGTCGCTAAGCTTCCGTTGCAAGATGAAGTGACATTGCTCCGCAGACTTCCGGTTCATTTGCGATCCCTCCCGTAGACCCACAACGCAACCGAATCATCCGCTGGTGTCGAGTAAGCTGAAATGCAAGCAACGGTCTCGGAGGGAAACGGTCAGGGACCCAACAGCAGTAGCAGCAGCACCGGCCACAATCACAGCTCTTCTCCGAAACTGCCGCCACCCGGCTCGTGGGCATCGCTGAAGGCAAACGTGATAAGATGGCGCGGCTCACGGAAACTGGTACTCGTCATCGTCGCCATCGCACTCCTGCTCGACAATATGCTGCTGACCGTCGTTGTGCCAATTATTCCGGAGTTTCTTTACGACATCAGACACCCGGATGCACCGCTGGCCAGCTTTCCCAAGACTCCGCCGACCACACCGTGCGAGAAGGAGGTGACGACACCGTACAATGGGCATCGACGTTACAACGCAAGGTT]
[+] EMBL BM633786 [CCGCAGTGAGGCAGGCTCCTGGGTGAGTGCCGTTTCCGGTAGTGACGAATTTGCTGACTTCCATTTCAAGGAAGTAAACCACATACAGGCGACCTAATAAAACAGCGAACATTCGACGAAAAATTCCACAGAACCGCAGCCGTCGGGTATTCGAGCGGTACGGTACTGTCGCTAAGCTTCCGTTGCAAGATGAAGTGACATTGCTCCGCAGACTTCCGGTTCATTTGCGATCCCTCCCGTAGACCCACAACGCAACCGAATCATCCGCTGGTGTCGAGTAAGCTGAAATGCAAGCAACGGTCTCGGAGGGAAACGGTCAGGGACCCAACAGCAGTAGCAGCAGCACCGGCCACAATCACAGCTCTTCTCCGAAACTGCCGCCACCCGGCTCGTGGGCATCGCTGAAGGCAAACGTGATAAGATGGCGCGGCTCACGGAAACTGGTACTCGTCATCGTCGCCATCGCACTCCTGCTCGACAATATGCTGCTGACCGTCGTTGTGCCAATTATTCCGGAGTTTCTTTACGACATCAGACACCCGGATGCACCGCTGGCCAGCTTTCCCAAGACTCCGCCGACCACACCGTGCGAGAAGGAGGTGACGACACCGTACAATGGGCATCGACGTTACAACGCAAGGTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3275#0 CCGCCCACGCGTCCGGCCGATCAGACTGATCGATTTCGCGATACGTTTCTGTTGCGTTGG 60
consensus_3275#1 ------------------------------------------------------------
consensus_3275#0 GTCTGAAATTTTCAAATCCCAAGGAACGCTTTTAAGAACCCATACTTGTGGCTGCTATAA 120
consensus_3275#1 -----------------------------------------------------------C 1
consensus_3275#0 CGCGACCTCGCTACCTCGTTTGCTTAAGTGTAGAATAAAATAGTGCTGTACGTTTCGTTG 180
consensus_3275#1 CGCAGTGAGGCAGGCTC--CTGGGTGAGTGCCGTTTCCGGTAGTGACGAATTTGCTGACT 59
*** ** *** ** * **** * * ***** * * * *
consensus_3275#0 CCAAACGCGTGTTGCGGTGTACCATCTAGGGAAAGTTTACGATCATCTTCCGTCGCTGTT 240
consensus_3275#1 TCCATTTCAAG--GAAGTAAACCACATACAGGCGACCTAATAAAACAGCGAACATTCGAC 117
* * * * * ** **** ** * ** * * *
consensus_3275#0 GCAGA--TACAAGGCATTTAATTTGTGTTTTACGTGATTGATATGGT-TAGACGCTATTT 297
consensus_3275#1 GAAAAATTCCACAGAACCGCAGCCGTCGGGTATTCGAGCGGTACGGTACTGTCGCTAAGC 177
* * * * ** * * * ** ** ** * ** *** * *****
consensus_3275#0 TGCAGTCGTATGTTAGTACGGTCGTGGCAGTAGTTGGTGGTGTGCAAGGTTTTCACAACC 357
consensus_3275#1 TTCCGTTGCAAGATGAA------GTGACATTGCTCCGCAGACTTCCGGTTC------ATT 225
* * ** * * * * *** ** * * * * * * * * *
consensus_3275#0 TGGTGTGTCTCGCGCTCGTTCTTTCTATAGTTCAAAAAGCCGCTGGTGTCGAGTAAGCTG 417
consensus_3275#1 TGCGATCCCTCCCGTAGACCCACAACGCAACCGAATCATCCGCTGGTGTCGAGTAAGCTG 285
** * *** ** * * ** * *********************
consensus_3275#0 AAATGCAAGCAACGGTCTCGGAGGGAAACGGTCAGGGACCCAACAGCAGTAGCAGCAGCA 477
consensus_3275#1 AAATGCAAGCAACGGTCTCGGAGGGAAACGGTCAGGGACCCAACAGCAGTAGCAGCAGCA 345
************************************************************
consensus_3275#0 CCGGCCACAATCACAGCTCTTCTCCGAAACTGCCGCCACCCGGCTCGTGGGCATCGCTGA 537
consensus_3275#1 CCGGCCACAATCACAGCTCTTCTCCGAAACTGCCGCCACCCGGCTCGTGGGCATCGCTGA 405
************************************************************
consensus_3275#0 AGGCAAACGTGATAAGATGGCGCGGCTCACGGAAACTGGTACTCGTCATCGTCGCCATCG 597
consensus_3275#1 AGGCAAACGTGATAAGATGGCGCGGCTCACGGAAACTGGTACTCGTCATCGTCGCCATCG 465
************************************************************
consensus_3275#0 CACTCCTGCTCGACAATATGCTGCTGGACCGTCGTTGTGCCAATCATTCCGGAGTTTCTT 657
consensus_3275#1 CACTCCTGCTCGACAATATGCTGCTG-ACCGTCGTTGTGCCAATTATTCCGGAGTTTCTT 524
************************** ***************** ***************
consensus_3275#0 TACGACATCAGACACCCGGATGCACCGCTGGCCAGCTTTCCCAAGACTCCGCCGACCACA 717
consensus_3275#1 TACGACATCAGACACCCGGATGCACCGCTGGCCAGCTTTCCCAAGACTCCGCCGACCACA 584
************************************************************
consensus_3275#0 CCGTGCGAGAAGGAGGTGACGACACCGTACAATGG-TATCGACGTTACAACGCAAGGTTA 776
consensus_3275#1 CCGTGCGAGAAGGAGGTGACGACACCGTACAATGGGCATCGACGTTACAACGCAAGGTT- 643
*********************************** **********************
consensus_3275#0 CGATAATGCTAGCTGGTACGCGGAACGGGAGGAACGGCACAAGGAGCTGGTGGAGGAAAC 836
consensus_3275#1 ------------------------------------------------------------
consensus_3275#0 GGTCGAGGTTGGGCTTATGTTTGCCTCGAAAGCATTCGTCC 877
consensus_3275#1 -----------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||