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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3430#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 713 fasta sequence
[CCGCCTCCGGCCAGCAGCGCCGCGTCCTCCTTTATGTAGTCTCTTTTTGTCTGTGCATGGCTTTATTCATGCTGAAAGGAAATCAATATATACAATTCGTGCCTAAAGACAAAAGTAATCCAGTGACACAACAAAGAGTTTTCGAAGGACCTGGAGGAGCACTGCGTGGAGTGACTTATCTCTAAGTGAAATACTCAACACCATCATCACCGAATATCATCATGGAAAAACGTATTTTGTTGGAAAAACGAGGTCGACCGGATGATGAGATCACAGAGCTCATTCTGGACAACTGTCGGAGCACGTACATTGATGGGCTCACAGACAGCTTCACAGCACTCGAAACGCTCAGCCTCATCAACGTCGGGCTGGTTTCGCTGAAAAATTTTCCCAAGCTGTCCAACCTCCGCAAGCTGGAACTCTCGGACAACAGAATATCGAACGGGTTGAACCACCTTACCGGTAGCCCGAAACTTACACATCTGAACCTGTCCGGCAACCGGATTAAGGACTTCGATGAGCTTCAGCCGCTGAAAGATTTGGAGAAACCTGGAAGTGCTGGATCTGTTCAACAATCAGGTGACACTGATTGAAAAACTATCGTGAGAAATTGTTTCAACTGATTCCATCGCTCAACTATCTGGATGGATTCGACAAAAGAGTATGTGGAAGCACCATCCGATGAGGAAGACATGGCTGAAGAGGAGGAACCG]
[+] EMBL BM581233 [CCGCCTCCGGCCAGCAGCGCCGCGTCCTCCTTTATGTAGTCTCTTTTTGTCTGTGCATGGCTTTATTCATGCTGAAAGGAAATCAATATATACAATTCGTGCCTAAAGACAAAAGTAATCCAGTGACACAACAAAGAGTTTTCGAAGGACCTGGAGGAGCACTGCGTGGAGTGACTTATCTCTAAGTGAAATACTCAACACCATCATCACCGAATATCATCATGGAAAAACGTATTTTGTTGGAAAAACGAGGTCGACCGGATGATGAGATCACAGAGCTCATTCTGGACAACTGTCGGAGCACGTACATTGATGGGCTCACAGACAGCTTCACAGCACTCGAAACGCTCAGCCTCATCAACGTCGGGCTGGTTTCGCTGAAAAATTTTCCCAAGCTGTCCAACCTCCGCAAGCTGGAACTCTCGGACAACAGAATATCGAACGGGTTGAACCACCTTACCGGTAGCCCGAAACTTACACATCTGAACCTGTCCGGCAACCGGATTAAGGACTTCGATGAGCTTCAGCCGCTGAAAGATTTGGAGAAACCTGGAAGTGCTGGATCTGTTCAACAATCAGGTGACACTGATTGAAAAACTATCGTGAGAAATTGTTTCAACTGATTCCATCGCTCAACTATCTGGATGGATTCGACAAAAGAGTA ]
[+] EMBL BM625705 [ ccgCCTCCTTTATGTAGTCTCTTTTTGTCTGTGCATGGCTTTATTCATGCTGAAAGGAAATCAATACATAAAATTCGTGCCTAAAGACAAAAGTAATCCAGTGACACAACAAAGAGTTTTCGAAGGACCTGGAGGAGCACTGCGTGGAGTGACTTATCTCTAAGTGAAATACTCAACACCATCATCACCGAATATCATCATGGAAAAGCGTATTTTGTTGGAAAAACGAGGTCGACCGGATGATGAGATCACAGAGCTCATTCTGGACAACTGTCGGAGCACGTACATTGATGGGCTCACAGACAGCTTCACAGCACTCGAAACGCTCAGCCTCATCAACGTCGGGCTGGTTTCGCTGAAAAATTTCCCCAAGCTGTCCAACCTCCGCAAGCTGGAACTCTCGGACAACAGAATATCGAACGGGTTGAACCACCTTACCGGTAGCCCGAAACTTACACATCTGAACCTGTCCGGCAACCGGATTAAGGACTTCGATGAGCTTCAGCCGCTGAAAGATTTGGAG AACCTGGAAGTGCTGGATCTGTTCAACAATCAGGTGACACTGATTG AAAACTATCGTGAGAAATTGTTTCAACTGATTCCATCGCTCAACTATCTGGATGGATTCGAC AAAGAGTATGTGGAAGCACCATCCGATGAGGAAGACATGGCTGAAGAGGAGGAACCG]
consensusID : consensus_3430#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 457 fasta sequence
[CCGCCCACGCGTCCGCAGCAGCAAGAGAAGCAAGCATTTAGCCCTATAGCGAAAAAGGAAATCAATACATAAAATTCGTGCCTAAAGACAAAAGTAATCCAGTGACACAACAAAGAGTTTTCGAAGGACCTGGAGGAGCACTGCGTGGAGTGACTTATCTCTAAGTGAAATACTCAACACCATCATCACCGAATATCATCATGGAAAAGCGTATTTTGTTGGAAAAACGAGGTCGACCGGATGATGAGATCACAGAGCTCATTCTGGACAACTGTCGGAGCACGTACATTGATGGGCTCACAGACAGCTTCACAGCACTCGAAACGCTCAGCCTCATCAACGTCGGGCTGGTTTCGCTGAAAAATTTCCCCAAGCTGTCCAACCTCCGCAAGCTGGAACTCTCGGACAACAGAATATCGAACGGGTTGAACCACCTTACCGGTAGCCCGAAACTTAC]
[+] EMBL BM596662 [CCGCCCACGCGTCCGCAGCAGCAAGAGAAGCAAGCATTTAGCCCTATAGCGAAAAAGGAAATCAATACATAAAATTCGTGCCTAAAGACAAAAGTAATCCAGTGACACAACAAAGAGTTTTCGAAGGACCTGGAGGAGCACTGCGTGGAGTGACTTATCTCTAAGTGAAATACTCAACACCATCATCACCGAATATCATCATGGAAAAGCGTATTTTGTTGGAAAAACGAGGTCGACCGGATGATGAGATCACAGAGCTCATTCTGGACAACTGTCGGAGCACGTACATTGATGGGCTCACAGACAGCTTCACAGCACTCGAAACGCTCAGCCTCATCAACGTCGGGCTGGTTTCGCTGAAAAATTTCCCCAAGCTGTCCAACCTCCGCAAGCTGGAACTCTCGGACAACAGAATATCGAACGGGTTGAACCACCTTACCGGTAGCCCGAAACTTAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3430#0 CCGCCTCCGGCCAGCAGCGCCGCGTCCTCCTTTATGTAGTCTCTTTTTGTCTGTGCATGG 60
consensus_3430#1 -------------------CCGCCCACGCGTCCGCAGCAGCAAGAGAAGCAAGCATTTAG 41
**** * * * * * * * *
consensus_3430#0 CTTTATTCATGCTGAAAGGAAATCAATATATACAATTCGTGCCTAAAGACAAAAGTAATC 120
consensus_3430#1 CCCTAT--AGCGAAAAAGGAAATCAATACATAAAATTCGTGCCTAAAGACAAAAGTAATC 99
* *** * ************** *** ***************************
consensus_3430#0 CAGTGACACAACAAAGAGTTTTCGAAGGACCTGGAGGAGCACTGCGTGGAGTGACTTATC 180
consensus_3430#1 CAGTGACACAACAAAGAGTTTTCGAAGGACCTGGAGGAGCACTGCGTGGAGTGACTTATC 159
************************************************************
consensus_3430#0 TCTAAGTGAAATACTCAACACCATCATCACCGAATATCATCATGGAAAAACGTATTTTGT 240
consensus_3430#1 TCTAAGTGAAATACTCAACACCATCATCACCGAATATCATCATGGAAAAGCGTATTTTGT 219
************************************************* **********
consensus_3430#0 TGGAAAAACGAGGTCGACCGGATGATGAGATCACAGAGCTCATTCTGGACAACTGTCGGA 300
consensus_3430#1 TGGAAAAACGAGGTCGACCGGATGATGAGATCACAGAGCTCATTCTGGACAACTGTCGGA 279
************************************************************
consensus_3430#0 GCACGTACATTGATGGGCTCACAGACAGCTTCACAGCACTCGAAACGCTCAGCCTCATCA 360
consensus_3430#1 GCACGTACATTGATGGGCTCACAGACAGCTTCACAGCACTCGAAACGCTCAGCCTCATCA 339
************************************************************
consensus_3430#0 ACGTCGGGCTGGTTTCGCTGAAAAATTTTCCCAAGCTGTCCAACCTCCGCAAGCTGGAAC 420
consensus_3430#1 ACGTCGGGCTGGTTTCGCTGAAAAATTTCCCCAAGCTGTCCAACCTCCGCAAGCTGGAAC 399
**************************** *******************************
consensus_3430#0 TCTCGGACAACAGAATATCGAACGGGTTGAACCACCTTACCGGTAGCCCGAAACTTACAC 480
consensus_3430#1 TCTCGGACAACAGAATATCGAACGGGTTGAACCACCTTACCGGTAGCCCGAAACTTAC-- 457
**********************************************************
consensus_3430#0 ATCTGAACCTGTCCGGCAACCGGATTAAGGACTTCGATGAGCTTCAGCCGCTGAAAGATT 540
consensus_3430#1 ------------------------------------------------------------
consensus_3430#0 TGGAGAAACCTGGAAGTGCTGGATCTGTTCAACAATCAGGTGACACTGATTGAAAAACTA 600
consensus_3430#1 ------------------------------------------------------------
consensus_3430#0 TCGTGAGAAATTGTTTCAACTGATTCCATCGCTCAACTATCTGGATGGATTCGACAAAAG 660
consensus_3430#1 ------------------------------------------------------------
consensus_3430#0 AGTATGTGGAAGCACCATCCGATGAGGAAGACATGGCTGAAGAGGAGGAACCG 713
consensus_3430#1 -----------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||