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Anopheles gambiae
cluster # 3473 cluster # 3473       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3473#0 length = 1679 sequences # 3  

consensusID : consensus_3473#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1679
fasta sequence
                              [GTGTATCCTTATTGTTGCATTGTTTGTGGGCAAGCATTTGCAAAGTGCATTATTTGTGTGTGACGCGCTTGTGACAGTCCTTTTCCTCCCGCTGTGTGTTTGTTCGCATCAAGCGAGCTTGGCGGGTGTTTGCTTCGTAGGTAACAGTCGGCGCGCGTGTAATTGTGTGCGTGTGTGTGTGTGTGTGGATTTGTGGAGGGGTGGTAGTCGCCAAAACGGCATGTGTTGATGTACAAATTGTGC-AAAAAAAAAGATGATAAACAACAAAACGAAAAGAGGTTAACCTAGCGCGGGAAAAGTGCGGTATCAGTTGTGGCGCGTATCGCGCTGTCTTCTAGTCATTTACACCCAGCACAGTCCCGAACGCACGGTGGTGCTGCTCCGCAAGGGCACGAATGCTGTGGTCGCAGCGGCCGTCCGAGCCAGCAACCATTCCAGTGCAGCAATGGCCGAGTACAAGAAGGTTTACTTTTCCGAGTTGTGCCGCCTGTGCGCGAGCAGTAATGTGGCGCGGGTGGGCATCTACTCGGAGGAGGGCCGCCGGAAGAAAATACACAACAAGATTACCGAATCTTTGCGTATAAATATCAACGAGACGGATCGCTTGCCGAAAACAGTATGTACCGCCTGCCTGAAGCAGGTGGAAGCGCTCGAAGAGTTCCGCGAAACGGCCGTAAAGGCGCAAAGCTTGCTGGAAAGCTGTCTCAATTCCCCGAGCGTAAAGAACGGTGGCGAAGTTTACATCCGCGATGTAAAGGCGAAGCGAGCTGCCCCAGACGGTGGCACGGCCGCAGACAAGTGTGGTACATATCTCACCATCGGTACCAGTGGTTAGAACAACGCAAGCGAAACAGCAGCAGCAGCAGCAGCAAAAACAACAGCAGCGACGGCAACAGCAGCAGCAGCAGCAGCAGCAACAACAGCAACAACCACAGCAGCAGCAGCAAAGACAACAGCAGCAGCAAATAAGTACCACGGCACCGATACTGATAAACAGCGTGCCGAAAAGCGTGGTTCAAACGGTCAACGGCAGCACGGTGGGCACGGTAGTTAGCAATGCCGGCACAGCCATGCCAACGATTTCGCTAAAAACCGTACAGCAGCCGCCTGCTCTGATGGCAGCAAACACCGGCAGTTTTTTTCTCAGCTCGATCATACAGGCGGTTGGCATCAAGACCGATGGTGACAATGCTAATCGAGCGGTACAGGCGACGGTACAGCCACAACAGCTTCCGCAGTTAAACCAACCGCAAATGCTGACCATCCAGAATCAGCAGCAACCAAACCAGCAGTACACGATTATGTTCGATGGGCAGACGACGATAAAGACGAACAACAACGTGCACTACAAGCTGGAAAAGGGTGCCCTCGTGCTCGGTTACACCGAAACCGGCCGACGTACAACCGCAGACCACCTTTACACAGGTGGATGAGTTTATAAAAATTAAAGCGAGTCCACCGAAAGCAGTCAAACGTGATTCTACGCAAAGCCTGAAGACTGACGATGCGAAAAAGAGACGAATCATACAGATCGTCAAACACCAGTCCCCGACCCAGCCGTCGCCGCAGAAAGTGACCCCCAGCGTCGGTACCTTTACGATCGAGGCACCCACCATCACGTCGCCCGTTGCAGCCACGCCCGTCTCCTCGTCCGGCATGCTCGTGTCCGGCAGCAACGC]

[+] EMBL BM615899             [GTGTATCCTTATTGTTGCATTGTTTGTGGGCAAGCATTTGCAAAGTGCATTATTTGTGTGTGACGCGCTTGTGACAGTCCTTTTCCTCCCGCTGTGTGTTTGTTCGCATCAAGCGAGCTTGGCGGGTGTTTGCTTCGTAGGTAACAGTCGGCGCGCGTGTAATTGTGTGCGTGTGTGTGTGTGTGTGGATTTGTGGAGGGGTGGTAGTCGCCAAAACGGCATGTGTTGATGTACAAATTGTGC AAAAAAAAAGATGATAAACAACAAAACGAAAAGAGGTTAACCTAGCGCGGGAAAAGTGCGGTATCAGTTGTGGCGCGTATCGCGCTGTCTTCTAGTCATTTACACCCAGCACAGTCCCGAACGCACGGTGGTGCTGCTCCGCAAGGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS08TJB             [                                                                                                                                                                                    cTGTGTGGATTTGTGGAGGGGT GTAGTCGCCAAAACGGCATGTGTTGATGTACAAATTGTGCAAAAAAAAAAGATGATAAACAACAAAACGAAAAGAGGTTAACCTAGCGCGGGAAAAGTGCGGTATCAGTTGTGGCGCGTATCGC CTGTCTTCTAGTCATTTACACCCAGCACAGTCCCGAACGCACGGTGGTGCTGCTCCGCAAGGGCACGAATGCTGTGGTCGCAGCGGCCGTCCGAGCCAGCAACCATTCCAGTGCAGCAATGGCCGAGTACAAGAAGGTTTACTTTTCCGAGTTGTGCCGCCTGTGCGCGAGCAGTAATGTGGCGCGGGTGGGCATCTACTCGGAGGAGGGCCGCCGGAAGAAAATACACAACAAGATTACCGAATCTTTGCGTATAAATATCAACGAGACGGATCGCTTGCCGAAAACAGTATGTACCGCCTGCCTGAAGCAGGTGGAAGCGCTCGAAGAGTTCCGCGAAACGGCCGTAAAGGCGCAAAGCTTGCTGGAAAGCTGTCTCAATTCCCCGAGCGTAAAGAACGGTGGCGAAGTTTACATCCGCGATGTAAAGGCGAAGCGAGCTGCCCCAGACGGTGGCACGGCCGCAGACAAGTGTGGTACATATCTCACCATCGGTACCAGTGGTTAGAACAACGCAAGCGAAACAGCAGCAGCAGCAGCAGCAAAAACAACAGCAGCGACGGCAACAGCAGCAGCAGCAGCAGCAGCAACAACAGCAACAACCACAGCAGCAGCAGCAAAGACAACAGCAGCAGCAAATAAGTACCACGGCACCGATACTGATAAACAGCGTGCCGAAAAGCGTGGTTCAAACGGTCAACGGCAGCACGGTGGGCACGGTAGTTAGCAATGCCGGCACAGCCATGCCAACGATTTCGCTAAAAACCGTACAGCAGCCGCCTGCTCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CNS08TJC             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GACGGTGGCACGGCCGCAGACAAGTGTGGTACATTTTTCACCATCGGTACCAGTGGTTAGAACAACGCAAGCGAAACAGCAGCAGCAGCAGCAGCAAAAACAACAGCAGCAACGGCAACAGCAGCAGCAGCAGCAGCAGCAACAACAGCAACAACCACAGCAGCAGCAGCAAAGACAACAGCAGCAGCAAATAAGTACCACGGCACCGATACTGATAAACAGCGTGCCGAAAAGCGTGGTTCAAACGGTCAACGGCAGCACGGTGGGCACGGTAGTGAGCAATGCCGGCACAGCCATGCCAACGATTTCGCTAACAACCGTACAGCAGCCGCCTGCTCTGATGGCAGCAAACACCGGCAGTTTTTTTCTCAGCTCGATCATACAGGCGGTTGGCATCAAGACCGATGGTGACAATGCTAATCGAGCGGTACAGGCGACGGTACAGCCACAACAGCTTCCGCAGTTAAACCAACCGCAAATGCTGACCATCCAGAATCAGCAGCAACCAAACCAGCAGTACACGATTATGTTCGATGGGCAGACGACGATAAAGACGAACAACAACGTGCACTACAAGCTGGAAAAGGGTGCCCTCGTGCTCGGTTACACCGAAACCGGCCGACGTACAACCGCAGACCACCTTTACACAGGTGGATGAGTTTATAAAAATTAAAGCGAGTCCACCGAAAGCAGTCAAACGTGATTCTACGCAAAGCCTGAAGACTGACGATGCGAAAAAGAGACGAATCATACAGATCGTCAAACACCAGTCCCCGACCCAGCCGTCGCCGCAGAAAGTGACCCCCAGCGTCGGTACCTTTACGATCGAGGCACCCACCATCACGTCGCCCGTTGCAGCCACGCCCGTCTCCTCGTCCGGCATGCTCGTGTCCGGCAGCAACGC]


>consensus_3473#0 GTGTATCCTTATTGTTGCATTGTTTGTGGGCAAGCATTTGCAAAGTGCATTATTTGTGTG TGACGCGCTTGTGACAGTCCTTTTCCTCCCGCTGTGTGTTTGTTCGCATCAAGCGAGCTT GGCGGGTGTTTGCTTCGTAGGTAACAGTCGGCGCGCGTGTAATTGTGTGCGTGTGTGTGT GTGTGTGGATTTGTGGAGGGGTGGTAGTCGCCAAAACGGCATGTGTTGATGTACAAATTG TGCAAAAAAAAAGATGATAAACAACAAAACGAAAAGAGGTTAACCTAGCGCGGGAAAAGT GCGGTATCAGTTGTGGCGCGTATCGCGCTGTCTTCTAGTCATTTACACCCAGCACAGTCC CGAACGCACGGTGGTGCTGCTCCGCAAGGGCACGAATGCTGTGGTCGCAGCGGCCGTCCG AGCCAGCAACCATTCCAGTGCAGCAATGGCCGAGTACAAGAAGGTTTACTTTTCCGAGTT GTGCCGCCTGTGCGCGAGCAGTAATGTGGCGCGGGTGGGCATCTACTCGGAGGAGGGCCG CCGGAAGAAAATACACAACAAGATTACCGAATCTTTGCGTATAAATATCAACGAGACGGA TCGCTTGCCGAAAACAGTATGTACCGCCTGCCTGAAGCAGGTGGAAGCGCTCGAAGAGTT CCGCGAAACGGCCGTAAAGGCGCAAAGCTTGCTGGAAAGCTGTCTCAATTCCCCGAGCGT AAAGAACGGTGGCGAAGTTTACATCCGCGATGTAAAGGCGAAGCGAGCTGCCCCAGACGG TGGCACGGCCGCAGACAAGTGTGGTACATATCTCACCATCGGTACCAGTGGTTAGAACAA CGCAAGCGAAACAGCAGCAGCAGCAGCAGCAAAAACAACAGCAGCGACGGCAACAGCAGC AGCAGCAGCAGCAGCAACAACAGCAACAACCACAGCAGCAGCAGCAAAGACAACAGCAGC AGCAAATAAGTACCACGGCACCGATACTGATAAACAGCGTGCCGAAAAGCGTGGTTCAAA CGGTCAACGGCAGCACGGTGGGCACGGTAGTTAGCAATGCCGGCACAGCCATGCCAACGA TTTCGCTAAAAACCGTACAGCAGCCGCCTGCTCTGATGGCAGCAAACACCGGCAGTTTTT TTCTCAGCTCGATCATACAGGCGGTTGGCATCAAGACCGATGGTGACAATGCTAATCGAG CGGTACAGGCGACGGTACAGCCACAACAGCTTCCGCAGTTAAACCAACCGCAAATGCTGA CCATCCAGAATCAGCAGCAACCAAACCAGCAGTACACGATTATGTTCGATGGGCAGACGA CGATAAAGACGAACAACAACGTGCACTACAAGCTGGAAAAGGGTGCCCTCGTGCTCGGTT ACACCGAAACCGGCCGACGTACAACCGCAGACCACCTTTACACAGGTGGATGAGTTTATA AAAATTAAAGCGAGTCCACCGAAAGCAGTCAAACGTGATTCTACGCAAAGCCTGAAGACT GACGATGCGAAAAAGAGACGAATCATACAGATCGTCAAACACCAGTCCCCGACCCAGCCG TCGCCGCAGAAAGTGACCCCCAGCGTCGGTACCTTTACGATCGAGGCACCCACCATCACG TCGCCCGTTGCAGCCACGCCCGTCTCCTCGTCCGGCATGCTCGTGTCCGGCAGCAACGC



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)