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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3566#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 800 fasta sequence
[CCGCCCACGCGTCCGCCCGGACAAGGCCCAGATAGACCACAGGAAGTATCATACACAGATACTAAGATAATTGGCAATGGAAGCTTCGGTGTCGTCTTCCAGGCGAAACTCTGTGATACGGGCGAGCTAGTCGCTATCAAGAAGGTGTTACAGGACAAACGATTTAAGAACCGTGAACTACAGATCATGCGACGACTAGAACACTGTAACATCGTTAAGCTAAAATATTTCTTCTACTCGAGTGGCGAAAAGAAAGACGAAGTTTATCTGAACTTAGTGCTCGAATATATCCCAGAAACGGTTTATAAAGTCGCCCGTCACTATGCTAAGAACAAGTTAACGATACCTATCAACTATATCCGAATTTACATGTATCAATTATTCAGAAGTCTTGCTTATATTCACTCGCTTGGTATCTGTCACCGTGACATCAAACCACAGAACCTGCTGCTTAATCCTGAGACGGCAGTGCTAAAGCTGTGCGACTTTGGAAGCGCCAAGCAGCTGCTGGACGGTGAGCCAAACGTGTCGTACATCTGCTCCAGATATTATCGAGCACCGGAGCTGATATTCGGCGCTATCAACTACACCACTAAAATTGACGTATGGAGTGCAGGATGCGTGCTTGCAGAACTGTTGCTCGGACAACCAATCTTCCCGGGAGATTCTGGCGTCGATCAGCTGGTGGAAATCATCAAAGTCCTCGGCACACCGACACGGGAGCAGATCAAAGAGATGAATCCCAATTATACGGAATTCAAATTCCCTCAGATCAAGAGTCATCCATGGCAAAAGGTGTT]
[+] EMBL BM650279 [CCGCCCACGCGTCCGCCCGGACAAGGCCCAGATAGACCACAGGAAGTATCATACACAGATACTAAGATAATTGGCAATGGAAGCTTCGGTGTCGTCTTCCAGGCGAAACTCTGTGATACGGGCGAGCTAGTCGCTATCAAGAAGGTGTTACAGGACAAACGATTTAAGAACCGTGAACTACAGATCATGCGACGACTAGAACACTGTAACATCGTTAAGCTAAAATATTTCTTCTACTCGAGTGGCGAAAAGAAAGACGAAGTTTATCTGAACTTAGTGCTCGAATATATCCCAGAAACGGTTTATAAAGTCGCCCGTCACTATGCTAAGAACAAGTTAACGATACCTATCAACTATATCCGAATTTACATGTATCAATTATTCAGAAGTCTTGCTTATATTCACTCGCTTGGTATCTGTCACCGTGACATCAAACCACAGAACCTGCTGCTTAATCCTGAGACGGCAGTGCTAAAGCTGTGCGACTTTGGAAGCGCCAAGCAGCTGCTGGACGGTGAGCCAAACGTGTCGTACATCTGCTCCAGATATTATCGAGCACCGGAGCTGATATTCGGCGCTATCAACTACACCACTAAAATTGACGTATGGAGTGCAGGATGCGTGCTTGCAGAACTGTTGCTCGGACAACCAATCTTCCCGGGAGATTCTGGCGTCGATCAGCTGGTGGAAATCATCAAAG ]
[+] EMBL BM648968 [ CCG GAACTACAGATCATGCGACGACTAGAACACTGTAACATCGTTAAGCTAAAATATTTCTTCTACTCGAGTGGCGAAAAGAAAGACGAAGTTTATCTGAACTTAGTGCTCGAATATATCCCAGAAACGGTTTATAAAGTCGCCCGTCACTATGCTAAGAACAAGTTAACGATACCTATCAACTATATCCGAATTTACATGTATCAATTATTCAGAAGTCTTGCTTATATTCACTCGCTTGGTATCTGTCACCGTGACATCAAACCACAGAACCTGCTGCTTAATCCTGAGACGGCAGTGCTAAAGCTGTGCGACTTTGGAAGCGCCAAGCAGCTGCTGGACGGTGAGCCAAACGTGTCGTACATCTGCTCCAGATATTATCGAGCACCGGAGCTGATATTCGGCGCTATCAACTACACCACTAAAATTGACGTATGGAGTGCAGGATGCGTGCTTGCAGAACTGTTGCTCGGACAACCAATCTTCCCGGGAGATTCTGGCGTCGATCAGCTGGTGGAAATCATCAAAGTCCTCGGCACACCGACACGGGAGCAGATCAAAGAGATGAATCCCAATTATACGGAATTCAAATTCCCTCAGATCAAGAGTCATCCATGGCAAAAGGTGTT]
consensusID : consensus_3566#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 673 fasta sequence
[CCGCCCACGCGTCCGCAGACGCGTTCGGTTGGAACTGTATCGATTAATGTTTTTCCATGCAACTAGGTATTTGTGATGCCTAATAGAATTTTCAAATTAATTTTTGGTGAATAATGGATTAGTTTTAGCTTTTCTAAATAGTGAACAAAGCTAAATTGTGTTAACTCCAAAACATACTCGTTAGCAAATTAAAATGGTCCTTATTGTTGAAACTATCGAGTTGACCTTCATAGGTAAGGACGGTTCCAAAGTGACGACGGTTGTAGCTACACCCGGACAAGGCCCAGATAGACCACAGGAAGTATCATACACAGATACTAAGATAATTGGCAATGGAAGCTTCGGTGTCGTCTTCCAGGCGAAACTCTGTGATACGGGCGAGCTAGTCGCTATCAAGAAGGTGTTACAGGACAAACGATTTAAGAACCGTGAACTACAGATCATGCGACGACTAGAACACTGTAACATCGTTAAGCTAAAATATTTCTTCTACTCGAGTGGCGAAAAGAAAGACGAAGTTTATCTGAACTTAGTGCTCGAATATATCCCAGAAACGGTTTATAAAGTCGCCCGTCACTATGCTAAGAACAAGTTAACGATACCTATCAACTATATCCGAATTTACATGTATCAATTATTCAGAAGTCTTGCTTATATTCACTCGCTTGGTATC]
[+] EMBL BM613264 [CCGCCCACGCGTCCGCAGACGCGTTCGGTTGGAACTGTATCGATTAATGTTTTTCCATGCAACTAGGTATTTGTGATGCCTAATAGAATTTTCAAATTAATTTTTGGTGAATAATGGATTAGTTTTAGCTTTTCTAAATAGTGAACAAAGCTAAATTGTGTTAACTCCAAAACATACTCGTTAGCAAATTAAAATGGTCCTTATTGTTGAAACTATCGAGTTGACCTTCATAGGTAAGGACGGTTCCAAAGTGACGACGGTTGTAGCTACACCCGGACAAGGCCCAGATAGACCACAGGAAGTATCATACACAGATACTAAGATAATTGGCAATGGAAGCTTCGGTGTCGTCTTCCAGGCGAAACTCTGTGATACGGGCGAGCTAGTCGCTATCAAGAAGGTGTTACAGGACAAACGATTTAAGAACCGTGAACTACAGATCATGCGACGACTAGAACACTGTAACATCGTTAAGCTAAAATATTTCTTCTACTCGAGTGGCGAAAAGAAAGACGAAGTTTATCTGAACTTAGTGCTCGAATATATCCCAGAAACGGTTTATAAAGTCGCCCGTCACTATGCTAAGAACAAGTTAACGATACCTATCAACTATATCCGAATTTACATGTATCAATTATTCAGAAGTCTTGCTTATATTCACTCGCTTGGTATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3566#0 ------------------------------------------------------------
consensus_3566#1 CCGCCCACGCGTCCGCAGACGCGTTCGGTTGGAACTGTATCGATTAATGTTTTTCCATGC 60
consensus_3566#0 ------------------------------------------------------------
consensus_3566#1 AACTAGGTATTTGTGATGCCTAATAGAATTTTCAAATTAATTTTTGGTGAATAATGGATT 120
consensus_3566#0 ------------------------------------------------------------
consensus_3566#1 AGTTTTAGCTTTTCTAAATAGTGAACAAAGCTAAATTGTGTTAACTCCAAAACATACTCG 180
consensus_3566#0 ------------------------------------------------------------
consensus_3566#1 TTAGCAAATTAAAATGGTCCTTATTGTTGAAACTATCGAGTTGACCTTCATAGGTAAGGA 240
consensus_3566#0 ----------------CCGCCCACGCGTCCGCCCGGACAAGGCCCAGATAGACCACAGGA 44
consensus_3566#1 CGGTTCCAAAGTGACGACGGTTGTAGCTACACCCGGACAAGGCCCAGATAGACCACAGGA 300
** * * *****************************
consensus_3566#0 AGTATCATACACAGATACTAAGATAATTGGCAATGGAAGCTTCGGTGTCGTCTTCCAGGC 104
consensus_3566#1 AGTATCATACACAGATACTAAGATAATTGGCAATGGAAGCTTCGGTGTCGTCTTCCAGGC 360
************************************************************
consensus_3566#0 GAAACTCTGTGATACGGGCGAGCTAGTCGCTATCAAGAAGGTGTTACAGGACAAACGATT 164
consensus_3566#1 GAAACTCTGTGATACGGGCGAGCTAGTCGCTATCAAGAAGGTGTTACAGGACAAACGATT 420
************************************************************
consensus_3566#0 TAAGAACCGTGAACTACAGATCATGCGACGACTAGAACACTGTAACATCGTTAAGCTAAA 224
consensus_3566#1 TAAGAACCGTGAACTACAGATCATGCGACGACTAGAACACTGTAACATCGTTAAGCTAAA 480
************************************************************
consensus_3566#0 ATATTTCTTCTACTCGAGTGGCGAAAAGAAAGACGAAGTTTATCTGAACTTAGTGCTCGA 284
consensus_3566#1 ATATTTCTTCTACTCGAGTGGCGAAAAGAAAGACGAAGTTTATCTGAACTTAGTGCTCGA 540
************************************************************
consensus_3566#0 ATATATCCCAGAAACGGTTTATAAAGTCGCCCGTCACTATGCTAAGAACAAGTTAACGAT 344
consensus_3566#1 ATATATCCCAGAAACGGTTTATAAAGTCGCCCGTCACTATGCTAAGAACAAGTTAACGAT 600
************************************************************
consensus_3566#0 ACCTATCAACTATATCCGAATTTACATGTATCAATTATTCAGAAGTCTTGCTTATATTCA 404
consensus_3566#1 ACCTATCAACTATATCCGAATTTACATGTATCAATTATTCAGAAGTCTTGCTTATATTCA 660
************************************************************
consensus_3566#0 CTCGCTTGGTATCTGTCACCGTGACATCAAACCACAGAACCTGCTGCTTAATCCTGAGAC 464
consensus_3566#1 CTCGCTTGGTATC----------------------------------------------- 673
*************
consensus_3566#0 GGCAGTGCTAAAGCTGTGCGACTTTGGAAGCGCCAAGCAGCTGCTGGACGGTGAGCCAAA 524
consensus_3566#1 ------------------------------------------------------------
consensus_3566#0 CGTGTCGTACATCTGCTCCAGATATTATCGAGCACCGGAGCTGATATTCGGCGCTATCAA 584
consensus_3566#1 ------------------------------------------------------------
consensus_3566#0 CTACACCACTAAAATTGACGTATGGAGTGCAGGATGCGTGCTTGCAGAACTGTTGCTCGG 644
consensus_3566#1 ------------------------------------------------------------
consensus_3566#0 ACAACCAATCTTCCCGGGAGATTCTGGCGTCGATCAGCTGGTGGAAATCATCAAAGTCCT 704
consensus_3566#1 ------------------------------------------------------------
consensus_3566#0 CGGCACACCGACACGGGAGCAGATCAAAGAGATGAATCCCAATTATACGGAATTCAAATT 764
consensus_3566#1 ------------------------------------------------------------
consensus_3566#0 CCCTCAGATCAAGAGTCATCCATGGCAAAAGGTGTT 800
consensus_3566#1 ------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||