cluster # 3726

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Anopheles gambiae
cluster # 3726 cluster # 3726 Sequences # 3 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3726#0 length = 773 sequences # 1

consensus_3726#1 length = 635 sequences # 1
consensus_3726#2 length = 469 sequences # 1

consensusID : consensus_3726#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 773
fasta sequence

                              [CCCGAGTTATATGAGATAACTTGCGTCACCAAGTTTACTGTTAAATTAATTTACCCTTCTATAATGAAAGGACTCTAAGGAAAGGAGAGGAAAGGAACCCTGCACCCGAAATGAATTGGAACGTACACACAGGCACACGCTCCGAAACGATACTAGTCACGCGTTATCGCGAAACCAAGCATGCGTTGACGATGAAAACTGATGGAGTGCAGCATGAAGTGCAGGTTGTTCTGGGTTTAGGGATGGACGGATCGTACGAATAGGGAAAACGACGAAAATGTACATCAAAACCGATTGTTATACACTATTNACACGTTTAAACTATANNANNAGATTTTACATCAATGTTACAAGCAGGCACTACACAACTATACTGCAAATTCGGCATTGATATCTCTACTGATTNCAGCGTGACCAGGCGACGTGAGCGGCACAAACTANNGAGATAANAGAACCCCCTACCGAGCACACGAGACAGGGATTATCCAATTTGCAANAGTCAAGGTACAGTACACGGGAGAAGTGAAAACTATATGCAAATAGGCATCGCTAANGCATTCTACTATCTACATTTNATAGCCNCCNACACTTTCTAANACGATCCACANCCTNANATTGGGCNTATCTAAACAAACACACACAACAACCANAACCTANACCCTANANGCACCGACGGAGCTCGTCTGCCGTGCCTCCANAGNACNGTGGGCCGGNGATACGGATGGTANACCACAACACTTAATACAAACCAAATCACTCCACCCCACCCANAG]

[+] EMBL AL692984             [CCCGAGTTATATGAGATAACTTGCGTCACCAAGTTTACTGTTAAATTAATTTACCCTTCTATAATGAAAGGACTCTAAGGAAAGGAGAGGAAAGGAACCCTGCACCCGAAATGAATTGGAACGTACACACAGGCACACGCTCCGAAACGATACTAGTCACGCGTTATCGCGAAACCAAGCATGCGTTGACGATGAAAACTGATGGAGTGCAGCATGAAGTGCAGGTTGTTCTGGGTTTAGGGATGGACGGATCGTACGAATAGGGAAAACGACGAAAATGTACATCAAAACCGATTGTTATACACTATTNACACGTTTAAACTATANNANNAGATTTTACATCAATGTTACAAGCAGGCACTACACAACTATACTGCAAATTCGGCATTGATATCTCTACTGATTNCAGCGTGACCAGGCGACGTGAGCGGCACAAACTANNGAGATAANAGAACCCCCTACCGAGCACACGAGACAGGGATTATCCAATTTGCAANAGTCAAGGTACAGTACACGGGAGAAGTGAAAACTATATGCAAATAGGCATCGCTAANGCATTCTACTATCTACATTTNATAGCCNCCNACACTTTCTAANACGATCCACANCCTNANATTGGGCNTATCTAAACAAACACACACAACAACCANAACCTANACCCTANANGCACCGACGGAGCTCGTCTGCCGTGCCTCCANAGNACNGTGGGCCGGNGATACGGATGGTANACCACAACACTTAATACAAACCAAATCACTCCACCCCACCCANAG]




>consensus_3726#0
CCCGAGTTATATGAGATAACTTGCGTCACCAAGTTTACTGTTAAATTAATTTACCCTTCT
ATAATGAAAGGACTCTAAGGAAAGGAGAGGAAAGGAACCCTGCACCCGAAATGAATTGGA
ACGTACACACAGGCACACGCTCCGAAACGATACTAGTCACGCGTTATCGCGAAACCAAGC
ATGCGTTGACGATGAAAACTGATGGAGTGCAGCATGAAGTGCAGGTTGTTCTGGGTTTAG
GGATGGACGGATCGTACGAATAGGGAAAACGACGAAAATGTACATCAAAACCGATTGTTA
TACACTATTNACACGTTTAAACTATANNANNAGATTTTACATCAATGTTACAAGCAGGCA
CTACACAACTATACTGCAAATTCGGCATTGATATCTCTACTGATTNCAGCGTGACCAGGC
GACGTGAGCGGCACAAACTANNGAGATAANAGAACCCCCTACCGAGCACACGAGACAGGG
ATTATCCAATTTGCAANAGTCAAGGTACAGTACACGGGAGAAGTGAAAACTATATGCAAA
TAGGCATCGCTAANGCATTCTACTATCTACATTTNATAGCCNCCNACACTTTCTAANACG
ATCCACANCCTNANATTGGGCNTATCTAAACAAACACACACAACAACCANAACCTANACC
CTANANGCACCGACGGAGCTCGTCTGCCGTGCCTCCANAGNACNGTGGGCCGGNGATACG
GATGGTANACCACAACACTTAATACAAACCAAATCACTCCACCCCACCCANAG

consensusID : consensus_3726#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 635
fasta sequence

                              [CCGGTTTAACCAATCATGTGAGGGGAGGGGTGTGATGTGACGTAGACGGAAGCTTTAAAACAAATTCGGTAGCACGTATTCGGCCAATATTACGGTGTTACGGAACGGCACAGATTAGCAGTACGACCCCACGGCCGTGCATTAAAAATGCCGACCATTTGCCGCCGAGAGCTACCTAAACTAAACTAAAACAAAACTGAGAAGAAAAAAAAAACACAATTTGATGAACAAAGCTGGATAAATGGGATCGACAATCGCGCACTTTTGCATTCATAGTTTCGGTACGCATGGGTTTTGGGCATGTCACAAACGGTCGGTTTCTTCACACCACACTCACCAAACAGCACCGTTTGTTGACTGTAAGGCGGCAGAGAGGGAACTATAACTCTAAAGCAAAAACATAAAAAAAACAGATCATGAAACGATAATGAGATAAACTTGGGTGGACGCAACTAGAATTGCGCGTGCGAGCCGGAATGAGCCCCGATTTACTGTTAAATTAATTTACCCTTCTATAATGAAAGGACTCTAAGGAAAGGAAAGGAAAGGAACCCTGCACCCGAAATGAATTGGAACGTACACACAAGACACACGCTCCGAAACGATACTAGTCACGCGTTATCGCGAAACCAAGC]

[+] EMBL BM648034             [CCGGTTTAACCAATCATGTGAGGGGAGGGGTGTGATGTGACGTAGACGGAAGCTTTAAAACAAATTCGGTAGCACGTATTCGGCCAATATTACGGTGTTACGGAACGGCACAGATTAGCAGTACGACCCCACGGCCGTGCATTAAAAATGCCGACCATTTGCCGCCGAGAGCTACCTAAACTAAACTAAAACAAAACTGAGAAGAAAAAAAAAACACAATTTGATGAACAAAGCTGGATAAATGGGATCGACAATCGCGCACTTTTGCATTCATAGTTTCGGTACGCATGGGTTTTGGGCATGTCACAAACGGTCGGTTTCTTCACACCACACTCACCAAACAGCACCGTTTGTTGACTGTAAGGCGGCAGAGAGGGAACTATAACTCTAAAGCAAAAACATAAAAAAAACAGATCATGAAACGATAATGAGATAAACTTGGGTGGACGCAACTAGAATTGCGCGTGCGAGCCGGAATGAGCCCCGATTTACTGTTAAATTAATTTACCCTTCTATAATGAAAGGACTCTAAGGAAAGGAAAGGAAAGGAACCCTGCACCCGAAATGAATTGGAACGTACACACAAGACACACGCTCCGAAACGATACTAGTCACGCGTTATCGCGAAACCAAGC]




>consensus_3726#1
CCGGTTTAACCAATCATGTGAGGGGAGGGGTGTGATGTGACGTAGACGGAAGCTTTAAAA
CAAATTCGGTAGCACGTATTCGGCCAATATTACGGTGTTACGGAACGGCACAGATTAGCA
GTACGACCCCACGGCCGTGCATTAAAAATGCCGACCATTTGCCGCCGAGAGCTACCTAAA
CTAAACTAAAACAAAACTGAGAAGAAAAAAAAAACACAATTTGATGAACAAAGCTGGATA
AATGGGATCGACAATCGCGCACTTTTGCATTCATAGTTTCGGTACGCATGGGTTTTGGGC
ATGTCACAAACGGTCGGTTTCTTCACACCACACTCACCAAACAGCACCGTTTGTTGACTG
TAAGGCGGCAGAGAGGGAACTATAACTCTAAAGCAAAAACATAAAAAAAACAGATCATGA
AACGATAATGAGATAAACTTGGGTGGACGCAACTAGAATTGCGCGTGCGAGCCGGAATGA
GCCCCGATTTACTGTTAAATTAATTTACCCTTCTATAATGAAAGGACTCTAAGGAAAGGA
AAGGAAAGGAACCCTGCACCCGAAATGAATTGGAACGTACACACAAGACACACGCTCCGA
AACGATACTAGTCACGCGTTATCGCGAAACCAAGC

consensusID : consensus_3726#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 469
fasta sequence

                              [AAGAATCCCGCACGANTGNACACACGCTCCGAAACGATACTAGTCACGCGTTATCGCGAAACCAAGCATGCGTTGAGATGAAAATGATGGAGTGCAGCATGAAGTGCAGGTTGTTCTGGGTTTAGGGATGGACGGATCGTACGAATAGGGAAAAGAGAGAATGTACATCAAAACCGATTGTTATACACTATTAAACGTTTAAACTATTTTTTTAGTTTTACATCAATGTTACAAGAGGCATACACAATATACTGCAAATTGGATTGATATTTACTGATTTAGGTAAAAGGCGACGTGAGCGGCAAAATAAGAGATAAAGAACCCCCTACCGAGCACACGAGACAGGGATTATCCAATTGAAGTAAGGTACAGTACACGGGAGAAGTGAAAACTATATGCAAATAGGCATCGCTAAGCATTCTACTATCTACATTTTATAGCANAAATTTCTAAACGATCACAACTAATG]

[+] EMBL BX466156             [AAGAATCCCGCACGANTGNACACACGCTCCGAAACGATACTAGTCACGCGTTATCGCGAAACCAAGCATGCGTTGAGATGAAAATGATGGAGTGCAGCATGAAGTGCAGGTTGTTCTGGGTTTAGGGATGGACGGATCGTACGAATAGGGAAAAGAGAGAATGTACATCAAAACCGATTGTTATACACTATTAAACGTTTAAACTATTTTTTTAGTTTTACATCAATGTTACAAGAGGCATACACAATATACTGCAAATTGGATTGATATTTACTGATTTAGGTAAAAGGCGACGTGAGCGGCAAAATAAGAGATAAAGAACCCCCTACCGAGCACACGAGACAGGGATTATCCAATTGAAGTAAGGTACAGTACACGGGAGAAGTGAAAACTATATGCAAATAGGCATCGCTAAGCATTCTACTATCTACATTTTATAGCANAAATTTCTAAACGATCACAACTAATG]




>consensus_3726#2
AAGAATCCCGCACGANTGNACACACGCTCCGAAACGATACTAGTCACGCGTTATCGCGAA
ACCAAGCATGCGTTGAGATGAAAATGATGGAGTGCAGCATGAAGTGCAGGTTGTTCTGGG
TTTAGGGATGGACGGATCGTACGAATAGGGAAAAGAGAGAATGTACATCAAAACCGATTG
TTATACACTATTAAACGTTTAAACTATTTTTTTAGTTTTACATCAATGTTACAAGAGGCA
TACACAATATACTGCAAATTGGATTGATATTTACTGATTTAGGTAAAAGGCGACGTGAGC
GGCAAAATAAGAGATAAAGAACCCCCTACCGAGCACACGAGACAGGGATTATCCAATTGA
AGTAAGGTACAGTACACGGGAGAAGTGAAAACTATATGCAAATAGGCATCGCTAAGCATT
CTACTATCTACATTTTATAGCANAAATTTCTAAACGATCACAACTAATG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3726#0      CCCGAGTTATATGAGATAACTTGCGTCACCAAGTTTACTGTTAAATTAATTTACCCTTCT 60
consensus_3726#2      ------------------------------------------------------------
consensus_3726#1      ------------------------------------------------------------
                                                                                  

consensus_3726#0      ATAATGAAAGGACTCTAAGGAAAGGAGAGGAAAGGAACCCTGCACCCGAAATGAATTGGA 120
consensus_3726#2      --------------------------------------------------AAGAATC--- 7
consensus_3726#1      CCGGTTTAACCAATCATGTGAGGGGAGGGGTGTGATGTGACGTA---GACGGAAGCTTTA 57
                                                                           *      

consensus_3726#0      ACGTACACACAGGCACACGCTCCGAAACGATACTAGTCACGCGTTATCGCGAAACCAAGC 180
consensus_3726#2      CCGCACGANTGNACACACGCTCCGAAACGATACTAGTCACGCGTTATCGCGAAACCAAGC 67
consensus_3726#1      AAACAAATTCGGTAGCACGTATTCGGCCAATATTA------CGGTGTTACGGAAC--GGC 109
                          *          ****        * *** **      ** * *  ** ***   **

consensus_3726#0      ATGCGTTGACGATGAAAACTGATGGA-GTGCAGCATGAAGTGCAGGTTGTTCTGGGTTTA 239
consensus_3726#2      ATGCGTTGA-GATGAAAA-TGATGGA-GTGCAGCATGAAGTGCAGGTTGTTCTGGGTTTA 124
consensus_3726#1      ACAGATTAGCAGTACGACCCCACGGCCGTGCATTA-AAAATGCCGACCATTTGCCGCCGA 168
                      *    **     *   *    * **  *****  *  ** *** *    **    *   *

consensus_3726#0      GGGATGGACGGATCGTACGAATAGGGAAAACGACGAAAATGTACATCAAAACCGATTGTT 299
consensus_3726#2      GGGATGGACGGATCGTACGAATAGGGAAAAGA--GAGAATGTACATCAAAACCGATTGTT 182
consensus_3726#1      GAGCTACCTAAACTAAACTAAAACAAAACTGAGAAGAAAAAAAAAACACAAT---TTGAT 225
                      * * *      *    ** ** *   **         **   * * ** **    *** *

consensus_3726#0      ATACACTATTN-ACACGTTTAAACTATANNANNAGA-TTTTACATCAATGTTACAAGCAG 357
consensus_3726#2      ATACACTATTA-A-ACGTTTAAACTATTTTTTTAG--TTTTACATCAATGTTACAAG-AG 237
consensus_3726#1      GAACAAAGCTGGATAAATGGGATCGACAATCGCGCACTTTTGCATTCATAGTTTCGGTAC 285
                        ***    *  * *  *   * * *           **** ***  **  *    * * 

consensus_3726#0      GCACTA--CACAACTATACTGCAAATTCGGCATTGATATCTCTACTGATTNCAGCGTGAC 415
consensus_3726#2      GCA-TA--CACAA-TATACTGCAAATTGG--ATTGATATTT--ACTGATTTAGGTAAA-- 287
consensus_3726#1      GCATGGGTTTTGGGCATGTCACAAACGGTCGGTT--TCTTCACACCACACTCACCAAACA 343
                      ***            **    ****       **  * *    **               

consensus_3726#0      CAGGCGAC-GTGAGCGGCACAAAC-TANNGAGATAANAG-AACCCCCTACCGAGCACACG 472
consensus_3726#2      -AGGCGAC-GTGAGCGGCAAAAT----AAGAGATAAA-G-AACCCCCTACCGAGCACACG 339
consensus_3726#1      GCACCGTTTGTTGACTGTAAGGCGGCAGAGAGGGAACTATAACTCTAAAGCAAAAACATA 403
                          **   **   * * *          ***  **    *** *   * * *  ***  

consensus_3726#0      AGACAGG--GATTATCCAATTTGCAANAGTCAAGGTACAGTACACGGGAGAAGTGAAAAC 530
consensus_3726#2      AGACAGG--GATTATCCAATT-----GAAGTAAGGTACAGTACACGGGAGAAGTGAAAAC 392
consensus_3726#1      AAAAAAACAGATCATGAAACGATAATGAGATAAACTTGGGTGGACGCAACTA--GAATTG 461
                      * * *    *** **  **        *   **  *   **  ***  *  *  ***   

consensus_3726#0      TATATGCAAATAGGCATCGCTAANGCATTCTACTATCTACATTTNATAGCCNCCNACACT 590
consensus_3726#2      TATATGCAAATAGGCATCGCTAAG-CATTCTACTATCTACATTTTATAGC----ANAAAT 447
consensus_3726#1      CGCGTGCGAGCCGGAATGAGC--CCCGATTTACTGTTAAATTAATTTACCCTTCTATAAT 519
                          *** *   ** **        *  * **** *  *  *    ** *       * *

consensus_3726#0      TTCTAANACGATCCACANCCTNANATTGGGCNTATCTAAACAAACACACACAACAACCAN 650
consensus_3726#2      TTCTAAA-CGATC-ACAAC-TAATG----------------------------------- 469
consensus_3726#1      GAAAGGACTCTAAGGAAAGGAAAGGAAAGGAACCCTGCACCCGAAATGAATTGGAACGTA 579
                                      *     *                                     

consensus_3726#0      AACCTANACCCTANANGCACCGACGGAGCTCGTCTGCCGTGCCTCCANAGNACNGTGGGC 710
consensus_3726#2      ------------------------------------------------------------
consensus_3726#1      CACACAAGACACACGCTCCGAAACGATACTAGTCACGCGTTATCGCGAAACCAAGC---- 635
                                                                                  

consensus_3726#0      CGGNGATACGGATGGTANACCACAACACTTAATACAAACCAAATCACTCCACCCCACCCA 770
consensus_3726#2      ------------------------------------------------------------
consensus_3726#1      ------------------------------------------------------------
                                                                                  

consensus_3726#0      NAG 773
consensus_3726#2      ---
consensus_3726#1      ---