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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3748#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 744 fasta sequence
[GATTGCCCGAGGATTANAGTAGTCTTCGACTCAACCGTNTATCAAAATGATAATTCCTCATCTGCTGGCCCTGTTCGGTGCTGGCTTCGGGCAGAACCTGCGCGCTGAGGTCGATCAGCTGCTGGCCTTCCTGAACATGGATGAGGTGCGCACTGATCTATCGAGACGCGTACGGTGCAGAGCCGATCGGCTCGCAGGTCGTGCGATGCATCTAGGAGACTTCCGTGCAGTCGGAGGAGACCGTATGCGGGCTGGCGTGTGCTGATTCGNCAACCCGGTAGCTGCTGGCTGATCACGGGCCTTGGACCGAGGTCCTGTGGCTGTTGAGCATCCAGCGACTACCTGAACGGCATCNCCGCCATAGCTCGGTCTAGACTCCCTGTATAGACCCGACTCAGGTACAACGGCNTCGCTCGCGCGGGTATCCCGGCTCACTTGGGAACGCTGATGATGGNACGAGNATTCNCGTGNGCGACCAGCGAACCCTGGANAGTGGCCGCTGCAGCGCTCTGCGCTCCGNTAATCTTTCTATNTGCCCGAACCGACCAGGAGANTNCGGTGAGCTGTACCGGAATGAAACTCGAAGGNNCCNCGTCTGGCGGCTTAGTGGCATTTTCGACCCACGGCGGTTCAATTTGGAAGGCAACCCTGGGAATTGTACAACCNCGGTTATATNTCTNACCAGGCTCCAAGCGTTGCGCATGCNTATTTACTGGANCGATNACGNATNGTCNGANTCNCAAG]
[+] EMBL AL693640 [GATTGCCCGAGGATTANAGTAGTCTTCGACTCAACCGTNTATCAAAATGATAATTCCTCATCTGCTGGCCCTGTTCGGTGCTGGCTTCGGGCAGAACCTGCGCGCTGAGGTCGATCAGCTGCTGGCCTTCCTGAACATGGATGAGGTGCGCACTGATCTATCGAGACGCGTACGGTGCAGAGCCGATCGGCTCGCAGGTCGTGCGATGCATCTAGGAGACTTCCGTGCAGTCGGAGGAGACCGTATGCGGGCTGGCGTGTGCTGATTCGNCAACCCGGTAGCTGCTGGCTGATCACGGGCCTTGGACCGAGGTCCTGTGGCTGTTGAGCATCCAGCGACTACCTGAACGGCATCNCCGCCATAGCTCGGTCTAGACTCCCTGTATAGACCCGACTCAGGTACAACGGCNTCGCTCGCGCGGGTATCCCGGCTCACTTGGGAACGCTGATGATGGNACGAGNATTCNCGTGNGCGACCAGCGAACCCTGGANAGTGGCCGCTGCAGCGCTCTGCGCTCCGNTAATCTTTCTATNTGCCCGAACCGACCAGGAGANTNCGGTGAGCTGTACCGGAATGAAACTCGAAGGNNCCNCGTCTGGCGGCTTAGTGGCATTTTCGACCCACGGCGGTTCAATTTGGAAGGCAACCCTGGGAATTGTACAACCNCGGTTATATNTCTNACCAGGCTCCAAGCGTTGCGCATGCNTATTTACTGGANCGATNACGNATNGTCNGANTCNCAAG]
consensusID : consensus_3748#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 568 fasta sequence
[AATTGCCCCGCGCTTAATGCTACTGAGACTGTACGCGACAATGAAGTTCATCATCCTGCTGGCCCTGTTCGGTGCTGCCTTCGGGCAGAACCTGCGCGCTGAGTGTCGATCAGCTGCTGCCCTTCCTGAACATGGATGATGGTGCGCACGATCTACGAGCGCTACGTGCAGACCGACGCCCAGGTCGGCGAGATCTGGAGCTTCCTGCAGTCGGAGGAGACCTGATGCGGACCTGGCGTGTGCTTGATCGCCACCCTGGAGCTGCAGGAGATCAGNGCCTGGACC-GAGGTCCGTGGC-GTGAGCATCCGNGACTACCTGAACGG-ATCGCCGCCATGCTCGGTCTGACCCCGATCACCCGCTCGGTCAACGCTCGCTCGCCGGCTTCCCGCTCCTGGAACGCGATGATGGACGAGATCCGT--GC-CGC-AC-AACTGGAGTGGCGCCGAGGCTC-TGGCCCGCACCTTCATCGCCGACCCGACCAGCGAGTTCGGTGAGCTGTACGCATTGACCCAGGACCCGTCAGCGCTGGCTTTCAACCGCGTACATTGAGCACCCGGATGTCACCCGTTTT]
[+] EMBL AL693245 [AATTGCCCCGCGCTTAATGCTACTGAGACTGTACGCGACAATGAAGTTCATCATCCTGCTGGCCCTGTTCGGTGCTGCCTTCGGGCAGAACCTGCGCGCTGAGTGTCGATCAGCTGCTGCCCTTCCTGAACATGGATGATGGTGCGCACGATCTACGAGCGCTACGTGCAGACCGACGCCCAGGTCGGCGAGATCTGGAGCTTCCTGCAGTCGGAGGAGACCTGATGCGGACCTGGCGTGTGCTTGATCGCCACCCTGGAGCTGCAGGAGATCAGNGCCTGGACC GAGGTCCGTGGC GTGAGCATCCGNGACTACCTGAACGG ATCGCCGCCATGCTCGGTCTGACCCCGATCACCCGCTCGGTCAACGCTCGCTCGCCGGCTTCCCGCTCCTGGAACGCGATGATGGACGAGATCCGT GC CGC AC AACTGGAGTGGCGCCGAGGCTC TGGCCCGCACCTTCATCGCCGACCCGACCAGCGAGTTCGGTGAGCTGTACGCATTGACCCAGGACCCGTCAGCGCTGGCTTTCAACCGCGTACATTGAGCACCCGGATGTCACCCGTTTT]
[+] EMBL AL931265 [ ATTGCCGAG GNTGAGTG TACTGAGACTGTACGCGAC ATGAAGTTCATCATCCTGCTGG CCTGTTCGGTGCTGCCTTCGGGCAGAACCTGCGCGCTGAG GTCGATCAGCTGCTGCCCTTCCTGAACATGGATGA GGTGCGCACGATCTACGAGCGCTACGTGCAGACCGACGCCCAGGTCGGCGAGATCTGGAGCTTCCTGCAGTCGGAGGAGACC GATGCGG CCTGGCGTGTGC TGATCGCCACCCCGGAGCTGCAGGAGATCAGCGCCTGGACCTGAGGTCCGTGGCTGTGAGCATCCGCGACTACCTGAACGGCATCGCCGCCATGCTCGGTCTGACCCCGATCACCCGCTCGGTCAACGCTCGCTCGCCGGCTTCCCGCTCCTGGAACGCGATGATGGACGAGATCCGTGNGCTGGCAACAAACTGGAG GGCGCCGAGGGTCTTGGGCCG ACCTTCATCGGCGA CCGA CAGCGAGTTCGGTGAGCTGTACcg ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3748#0 GATTGCCCGAGGATTANAGTAGTCTTCGACTCAACCGTNTATCAAAATGATAATTCCTCA 60
consensus_3748#1 AATTGCCCCGCGCTTAATGCTACT---GA---GACTGTACGCGACAATGA-AGTTCATCA 53
******* * *** * ** ** ** * ***** * *** ***
consensus_3748#0 TC-TGCTGGCCCTGTTCGGTGCTGGCTTCGGGCAGAACCTGCGCGCTGAG-GTCGATCAG 118
consensus_3748#1 TCCTGCTGGCCCTGTTCGGTGCTGCCTTCGGGCAGAACCTGCGCGCTGAGTGTCGATCAG 113
** ********************* ************************* *********
consensus_3748#0 CTGCTGGCCTTCCTGAACATGGATGA-GGTGCGCACTGATCTATCGAGACGCGTACGGTG 177
consensus_3748#1 CTGCTGCCCTTCCTGAACATGGATGATGGTGCGCAC-GATCTA-CGAG-CGC-TACG-TG 168
****** ******************* ********* ****** **** *** **** **
consensus_3748#0 CAGAGCCGATCGGCTCGCAGGTCGTGCGATGCATCTAGGAGACTTCCGTGCAGTCGGAGG 237
consensus_3748#1 CAGA-----CCGACGCCCAGGTCG-GCGAG--ATCTGGAG--CTTCC-TGCAGTCGGAGG 217
**** ** * * ******* **** **** * ***** ************
consensus_3748#0 AGACCGTATGCGGGC-TGGCGTGTGCTGATTCGNCAACCCGGTAGCTGCTGGCTGATCAC 296
consensus_3748#1 AGACCTGATGCGGACCTGGCGTGTGCTTGATCGCCACCCTGG-AGCTGCAGGA-GATCAG 275
***** ****** * *********** *** ** ** ** ****** ** *****
consensus_3748#0 GGGCCTTGGACCGAGGTCCTGTGGCTGTTGAGCATCCAGCGACTACCTGAACGGCATCNC 356
consensus_3748#1 NG--CCTGGACCGAGGTCC-GTGGCG--TGAGCATCC-GNGACTACCTGAACGG-ATCGC 328
* * ************* ***** ********* * ************** *** *
consensus_3748#0 CGCCATAGCTCGGTCTAGACTCCCTGTATAGACCCGACTCAGGTACAACGGCNTCGCTCG 416
consensus_3748#1 CGCCAT-GCTCGGTCT-GACCCCGATCACCCGCTCGGT-------CAACG--CTCGCTCG 377
****** ********* *** ** * * ** ***** *******
consensus_3748#0 CGCGGGTATCCCGGCTCACTTGGGAACGCTGATGATGGNACGAGNATTCNCGTGNGCGAC 476
consensus_3748#1 CC--GGCTTCCCGCTCCT----GGAACGC-GATGATGGA-CGAGA---TCCGTGCCGCAC 426
* ** ***** * ******* ******** **** **** **
consensus_3748#0 CAGCGAACCCTGGANAGTGGCCGCTGCAGCGCTCTGCGCTCCGNTAATCTTTCTATNTGC 536
consensus_3748#1 AA-------CTGGAGTGGCGCCGAGGCTCTGGCCCGCAC-------------CTTCATCG 466
* ***** * **** ** * * ** * ** *
consensus_3748#0 CCGAACCGACCAGGAGANTNCGGTGAGCTGTACCGGAATGAAACTCGAAGGNNCCNCGTC 596
consensus_3748#1 CCGACCCGACCAGC-GAGTTCGGTGAGCTGTAC--GCATTGACCCAGGACCCGTCAGCGC 523
**** ******** ** * ************* * ** * * * * * *
consensus_3748#0 TGGCGGCTTAGTG-GCATTTTCGACCCACGGCGGTT--CAATTTGGAAGGCAACCCTGGG 653
consensus_3748#1 TGGCTTTCAACCGCGTACATTGAGCACCCGGATGTCACCCGTTTT--------------- 568
**** * * * * ** * * *** ** * ***
consensus_3748#0 AATTGTACAACCNCGGTTATATNTCTNACCAGGCTCCAAGCGTTGCGCATGCNTATTTAC 713
consensus_3748#1 ------------------------------------------------------------
consensus_3748#0 TGGANCGATNACGNATNGTCNGANTCNCAAG 744
consensus_3748#1 -------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||