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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3761#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 954 fasta sequence
[AGGCAGAATCCGCACGATGTATCCTCTTCCCCCCCCGTTGTTGACCCGGTGACATATTATATAACCTCATAGATCCTCAGCGTCCTAGGGCCAAACAGGTTGTGGGATTACGACCCACCAGCAGCTGAACATAGAGGCACTCAAAGCAACACGAAGGTTCACATTTAATACTGGCCCGGCAAACAGGACGCCACAGAGCGAAACGTTCTCACGCAGGTACCAGGTTAGGNTTAGGCTTTGCATGGCCCCCCAAGGGCCCCATGGGANNCGAGCGAGGAGCTGAGCGAACCACCAATTTCCAACTCTCTGCCGGGCTAGGGCAGCAGGCGAGATAGCGAAATTTGGTGGCGGNCCCCCCNAAAACCTGGGCGAACNAACGAACGAACCGACGCAAATTCAGGACAGTACTGTTCACCGANATANGACGGTAAANAGCTTGAGACCNACTGCTTTAGCGNGNGTTACGANGAGCGNGCGGGNAGGAACAACCGAGCGCCGNGAGACGGGCGCAGCGCGACGCAGCGNTGGGCGAGCAGNCCGNNGCTTCTGCGNCCTGGNGGNTNGGCNCNGGCNNNGANCGGNGAGCGGGGGNTNANCNAGCGAGAGNGGGNGGGCGGGCGGGNGGGTCAGGGGANCCCGCCGAAGNGAGTGGACGGGGGGGAANCGAAAGACCGGCGGNGGNTGGCAGGAACNCGGAGGCGGGAAAAAAACAGNCGGNGGCGGGCCCCACGNCTAGGGACGCGNGACCCNCCAGNGNNCGNGAAGGGCAAGAGACTGCTGGGAGGCCCAACAGGGGGGGNCGGCAGCACGGCAANGNCGCGGGCGCNCGAGCAGGCNGGAAAGCGTGGGGCGNGACGGAAAGTGGGNNGCCCGAGCGCGTAGGANAGGCGCGCNGCCCCGCGCCGGGACGGTNNCGNGACCNCAGNCAGAGGCAGGACCANGGANGCCGGNCCA]
[+] EMBL BX466564 [AGGCAGAATCCGCACGATGTATCCTCTTCCCCCCCCGTTGTTGACCCGGTGACATATTATATAACCTCATAGATCCTCAGCGTCCTAGGGCCAAACAGGTTGTGGGATTACGACCCACCAGCAGCTGAACATAGAGGCACTCAAAGCAACACGAAGGTTCACATTTAATACTGGCCCGGCAAACAGGACGCCACAGAGCGAAACGTTCTCACGCAGGTACCAGGTTAGGNTTAGGCTTTGCATGGCCCCCCAAGGGCCCCATGGGANNCGAGCGAGGAGCTGAGCGAACCACCAATTTCCAACTCTCTGCCGGGCTAGGGCAGCAGGCGAGATAGCGAAATTTGGTGGCGGNCCCCCCNAAAACCTGGGCGAACNAACGAACGAACCGACGCAAATTCAGGACAGTACTGTTCACCGANATANGACGGTAAANAGCTTGAGACCNACTGCTTTAGCGNGNGTTACGANGAGCGNGCGGGNAGGAACAACCGAGCGCCGNGAGACGGGCGCAGCGCGACGCAGCGNTGGGCGAGCAGNCCGNNGCTTCTGCGNCCTGGNGGNTNGGCNCNGGCNNNGANCGGNGAGCGGGGGNTNANCNAGCGAGAGNGGGNGGGCGGGCGGGNGGGTCAGGGGANCCCGCCGAAGNGAGTGGACGGGGGGGAANCGAAAGACCGGCGGNGGNTGGCAGGAACNCGGAGGCGGGAAAAAAACAGNCGGNGGCGGGCCCCACGNCTAGGGACGCGNGACCCNCCAGNGNNCGNGAAGGGCAAGAGACTGCTGGGAGGCCCAACAGGGGGGGNCGGCAGCACGGCAANGNCGCGGGCGCNCGAGCAGGCNGGAAAGCGTGGGGCGNGACGGAAAGTGGGNNGCCCGAGCGCGTAGGANAGGCGCGCNGCCCCGCGCCGGGACGGTNNCGNGACCNCAGNCAGAGGCAGGACCANGGANGCCGGNCCA]
consensusID : consensus_3761#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 867 fasta sequence
[CCGGCGATCGGAAAAATCGAACCGAAAGCGTGCATATTTATAACCTCATAGATCCTCAGCGTCCTAGGGCCAAACAGGTTGTGGGATTACGACCCACCAGCAGCTGAAATAGAGGCACTCAAAGCAACACGAAGGTTCACATTTAATACTGGCCCGGCAAACAGGACGCCACAGAGCGAAACTTCTCACGCAGTACCAGTTAGGTTAGGTTTGCATGGCCCCCCAAGGGCCCCATGGAGGAGGAGGAGTGAGCGAACCACCAATTTCCAATCTCTGCCGGGTGGAGAGCAGTAGGATTGTGCGCCCCAAACTGCGACACGAGAACAGAATCAGAATATTTCACGAATTAATAAGTTAACACTCTTACGGGTAAACAAGAGACACGAGCAAACGAAAAAAAAAAACAACAATTCGCGGGTGCCGCACGGCGGGTACTTAAGCGCGGAACCGAATCGGACAACTATTTAAGAGGAAAGGCGCACTGTTTTAGATAGAATTTACAATGCAAACACGGCAACGATTCGTATACCACTTGCGCCATTTGCGCTTTTGTGCGCCGGGTTTGTTTACAAACCGCGAGCTCTCACCCGGTACGTCATCGTGACTTGACGCATGCCAGAACGGGACACAACACAACCTCTACTTACCTTTGGCATTGTTTGCAGAATCGACTGTGCGTGTGAATGTGTGTCTACAACTAGTCGGGTTGAAATTCGCAAGCATTCTGCGCATGGTAAGAAATGACTGGATCGAGAAAAAAAACTCCTCATATTAAATCGAACGTTCCAAAATAATAATAATAACGTACAACCGAACGAAGCAGACGCCCAGCCGAGGGACGCGCTCCCCAATGCAATGGTTGGATTT]
[+] EMBL BM606720 [CCGGCGATCGGAAAAATCGAACCGAAAGCGTGCATATTTATAACCTCATAGATCCTCAGCGTCCTAGGGCCAAACAGGTTGTGGGATTACGACCCACCAGCAGCTGAAATAGAGGCACTCAAAGCAACACGAAGGTTCACATTTAATACTGGCCCGGCAAACAGGACGCCACAGAGCGAAACTTCTCACGCAGTACCAGTTAGGTTAGGTTTGCATGGCCCCCCAAGGGCCCCATGGAGGAGGAGGAGTGAGCGAACCACCAATTTCCAATCTCTGCCGGGTGGAGAGCAGTAGGATTGTGCGCCCCAAACTGCGACACGAGAACAGAATCAGAATATTTCACGAATTAATAAGTTAACACTCTTACGGGTAAACAAGAGACACGAGCAAACGAAAAAAAAAAACAACAATTCGCGGGTGCCGCACGGCGGGTACTTAAGCGCGGAACCGAATCGGACAACTATTTAAGAGGAAAGGCGCACTGTTTTAGATAGAATTTACAATGCAAACACGGCAACGATTCGTATACCACTTGCGCCATTTGCGCTTTTGTGCGCCGGGTTTGTTTACAAACCGCGAGCTCTCACCCGGTACGTCATCGTGACTTGACGCATGCCAGAACGGGACACAACACAACCTCTACTTACCTTTGGCATTGTTTGCAGAATCGAC ]
[+] EMBL BX620154 [ TACTAGTTAGGTTAGGTTTGCATGGCCCCCCAAGGGCCCCATGGAGGAGGAGGAGTGAGCGAACCACCAATTTCCAATCTCTGCCGGGTGGAGAGCAGTAGGATTGTGCGTCCCAAACTGCGACACGAGAACAGAAACAGAATATTTCACGAATTAATAAGTTAACACTCTTACGGGTAAACAAGAGACACGAGCAAACG AAAAAAAAACAACAATTCGCGGGTGCCGCACGGCGGGTACTTAAGCGCAGAACCGAATCGGACAACTATTTAAGAGGAAAGGCGCACTGTTTTAGATAGAATTTACAATGCAAACACGGCAACGATTCGTATACCACTTGCGCCATTTGCGCTTTTGTGCGCCGGGTTTGTTTACAAACCGCGAGCTCTCACCCGGTACGTCATCGTGACTTGACGCATGCCAGAACGGGACACAACACAACCTCTACTTACC TTGGCATTGTTTGCAGAATCGACTGTGCGTGTGAATGTGTGTCTACAACTAGTCGGGTTGAAATTCGCAAGCATTCTGCGCATGGTAAGAAATGACTGGATCGAGAAAAAAAACTCCTCATATTAAATCGAACGTTCCAAAATAATAATAATAACGTACAACCGAACGAAGCAGACGCCCAGCCGAGGGACGCGCTCCCCAATGCAATGGTTGGATTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3761#0 AGGCAGAATCCGCACGATGTATCCTCTTCCCCCCCCGTTGTTGACCCGGTGACATAT--- 57
consensus_3761#1 ------------------------CCGGCGATCGGAAAAATCGAACCGAAAGCGTGCATA 36
* * * * ** *** * *
consensus_3761#0 TATATAACCTCATAGATCCTCAGCGTCCTAGGGCCAAACAGGTTGTGGGATTACGACCCA 117
consensus_3761#1 TTTATAACCTCATAGATCCTCAGCGTCCTAGGGCCAAACAGGTTGTGGGATTACGACCCA 96
* **********************************************************
consensus_3761#0 CCAGCAGCTGAACATAGAGGCACTCAAAGCAACACGAAGGTTCACATTTAATACTGGCCC 177
consensus_3761#1 CCAGCAGCTGAA-ATAGAGGCACTCAAAGCAACACGAAGGTTCACATTTAATACTGGCCC 155
************ ***********************************************
consensus_3761#0 GGCAAACAGGACGCCACAGAGCGAAACGTTCTCACGCAGGTACCAGGTTAGGNTTAGGCT 237
consensus_3761#1 GGCAAACAGGACGCCACAGAGCGAAAC-TTCTCACGCAG-TACCAG--TTAGGTTAGG-T 210
*************************** *********** ****** * * ***** *
consensus_3761#0 TTGCATGGCCCCCCAAGGGCCCCATGGGANNCGAGCGAGGAGCTGAGCGAACCACCAATT 297
consensus_3761#1 TTGCATGGCCCCCCAAGGGCCCCATGGAGGAGG----AGGAG-TGAGCGAACCACCAATT 265
*************************** * ***** *****************
consensus_3761#0 TCCAACTCTCTGCCGGGCT-AGGGCAGCAGGCGAGATAGCGAAATTTGGTGGCGGNCCCC 356
consensus_3761#1 TCCAA-TCTCTGCCGGGTGGAGAGCAGTAGGATTGTGCGCCCCAAACTGCGAC--ACGAG 322
***** *********** ** **** *** * ** * * * * *
consensus_3761#0 CCNAAAACCTGGGCGA---ACNAACGAACGAACCGACGCAAATTCAGGACAGTACTGTTC 413
consensus_3761#1 AACAGAATCAGAATATTTCACGAATTAATAAGTTAACACTCTTACGGGTAAACAAGAGAC 382
* ** * * ** ** ** * ** * * * ** * * *
consensus_3761#0 ACCGANATANGACGGTAAANAGCTTGAGACCN--ACTGCTTTAGCGNGNGTTACGANGAG 471
consensus_3761#1 ACGAGCAAACGAAAAAAAAAAACAACAATTCGCGGGTGCCGCACGGCGGGTACTTAAGCG 442
** * * ** *** * * * * *** * * * ** * * *
consensus_3761#0 CGNG-CGGGNAGGAACAACCGAGCGCCGNGAGACGGGCGCAGCGCGACGCAGCGNTGGGC 530
consensus_3761#1 CGGAACCGAATCGGACAACTATTTAAGAGGAAAGGCGCACTGTTTTAGATAGAATTTACA 502
** * * * ***** ** * * ** * * * ** *
consensus_3761#0 GAGCAGNCCGNNGCTTCTGCGNCCTGGNGGNTNGGCNCNGGCNNNGANCGGNGAGCGGGG 590
consensus_3761#1 ATGCAAAC--ACGGCAACGATTCGTATACCACTTGCGCCATTTGCG-CTTTTGTGCGCCG 559
*** * * * * * ** * * * *** *
consensus_3761#0 GNTNANCNAGCGAGAGNGGGNGGGCGGGCGGGNGGGTCAGGGGANCCCGCCGAAGNGAGT 650
consensus_3761#1 GGTTTGTTTACAAACCGCGAGCTCTCACCCGGTACGTCATCGTGACTTGACGCA-TGCCA 618
* * * * * * ** **** * * * ** * *
consensus_3761#0 GGACGGGGGGGAANCGAAAGACCGGCGGNGGNTGGCAG-GAACNCGGAGGCGGGAAAAAA 709
consensus_3761#1 GAACGGGACACAACACAACCTCTACTTACCTTTGGCATTGTTTGCAGAATCG---ACTGT 675
* ***** ** ** * ***** * * ** ** *
consensus_3761#0 ACAGNCGGNGGCGGGCCCCACGNCTAGGGACGC-GNGACCCNCCAGNGNNC-GNGAAGGG 767
consensus_3761#1 GCGTGTGAATGTGTGTCT-ACAACTAGTCGGGTTGAAATTCGCAAGCATTCTGCGCATGG 734
* * * * * * ** **** * * * * * ** * * * * **
consensus_3761#0 CAAGAGACTGCTGGGAGGCCCAACAGGGGGGGNCGGCAGCACGGCAANGNCGCGGGCGCN 827
consensus_3761#1 TAAGAAATGACTGGA----TCGAGAAAAAAAACT--CCTCATATTAAA-TCGAACGTTCC 787
**** * **** * * * * ** ** ** * *
consensus_3761#0 CGAGCAGGCNGGAAAGCGTGGGGCGNGACGGAAAGTGGGNNGCCCGAGCGCGTAGGANAG 887
consensus_3761#1 AAAATAATAATAATAACGTACAACCGAACGAAGC---AGACGCCCAGCCG------AGGG 838
* * * * *** * *** * * **** ** * *
consensus_3761#0 GCGCGCNGCCCCGCGCCGGGACGGTNNCGNGACCNCAGNCAGAGGCAGGACCANGGANGC 947
consensus_3761#1 ACGCGCTCCCCAATGCAATGGTTGGATTT------------------------------- 867
***** *** ** * *
consensus_3761#0 CGGNCCA 954
consensus_3761#1 -------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||