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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3831#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 696 fasta sequence
[CCGGCTGGGTGAAGTCATACTAGAGCGCAAAGGGTGCAGCGTGACCGGTTAGCTTTTCCTGCTCCTTTTCGGTCCCGGTCCCGGTCGTCGGCTGTACGTTCGTCGCTTGTACCGCTCCGCAAGCGTAGGCATCACCGCATACGTCAGCAGCAGCACGGGAGCAACGGAAACAGTGAAGCATCACCACGCGCACCCACCTGACAAACATACCCGCAACCCGCAGAGCCGAGGGCAGCCGAGCCGTGCCGTGGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTTGTGTGTGTGTGTCTGTCTGTTTTTTGTTGTTGTTGAGATATTTATGGTGCTTCGAATCCAAGTTCGAACCGATCGCAAAAACCCGATATAAATAGGTTTGCGCGCGCTACCGGGGACTTTCCGGTGGACGGGGCGGTACAGGAGGACGCACCGGGCAGCCTAGCCGACGCGTGCACCACCACGAGTGGGAGCATCATCCGTTCCTCCGCGCCGAGGACGGTTGTTGCCCCGTCCTCGTTCTCCGGCTTTACCGCACACCGGGGCGACGAAACCCGCCGGCAGCTGGGAGCAGCAGCAGCAGCAGCAGCAACCGGAGCAGCCCACCGTGCACGACC]
[+] EMBL BM607176 [CCGGCTGGGTGAAGTCATACTAGAGCGCAAAGGGTGCAGCGTGACCGGTTAGCTTTTCCTGCTCCTTTTCGGTCCCGGTCCCGGTCGTCGGCTGTACGTTCGTCGCTTGTACCGCTCCGCAAGCGTAGGCATCACCGCATACGTCAGCAGCAGCACGGGAGCAACGGAAACAGTGAAGCATCACCACGCGCACCCACCTGACAAACATACCCGCAACCCGCAGAGCCGAGGGCAGCCGAGCCGTGCCGTGGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTTGTGTGTGTGTGTCTGTCTGTTTTTTGTTGTTGTTGAGATATTTATGGTGCTTCGAATCCAAGTTCGAACCGATCGCAAAAACCCGATATAAATAGGTTTGCGCGCGCTACCGGGGACTTTCCGGTGGACGGGGCGGTACAGGAGGACGCACCGGGCAGCCTAGCCGACGCGTGCACCACCACGAGTGGGAGCATCATCCGTTCCTCCGCGCCGAGGACGGTTGTTGCCCCGTCCTCGTTCTCCGGCTTTACCGCACACCGGGGCGACGAAACCCGCCGGCAGCTGGGAGCAGCAGCAGCAGCAGCAGCAACCGGAGCAGCCCACCGTGCACGACC]
consensusID : consensus_3831#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 635 fasta sequence
[CCGGCTTGTGTGTGTGTGTCTGTCTGTTTTTTGTTGTTGTTGAGATATTTATGGTGCTTCGAATCCAAGTTCGAACCGATCGCAAAAACCCGATATAAATAGGTTTGCGCGCGCTACCGGGTGAGTAAAAAAAAACAACCGTTCTGCTCTTCCGTCATATCCTCTGCCGCTCCCGCTTTCCCTCATAGCCCCTTCAGTTCTAATTGTGTTGCGATCAAAAACCTGAAAGTTATCAGATCGCGGGCGTTCAGGAAAATCACCTACACACACATGCACGAACTCGAATGCACTTTGGGTGGTACGCGCGGCGTACATTGCACCCGAGGAATTTGGGTGCATTTGCAGCACAGTGACACACGTCGCGTCGTGCAATCGGGTTTTCGCTTTAGAACCAAACAAAAAAAAAACAGCAAAAAGCCTTTTAGAAAGCCAACTTCCTAATGGATAACCTGCGACGTATCATTCATCTTTCCAGGGACTTTCCGGTGGACGGGGCGGTACAGGAGGACGCACCGGGCAGCCTAGCCGACGCGTGCACCACCACGAGTGGGAGCATCATCCGTTCCCTCCGCGCCGAGGACGGTTGTTGCCCCGTCCTCGTTCTCCGGCTTTACCGCACACCGGGGCGACGAAAC]
[+] EMBL BM603786 [CCGGCTTGTGTGTGTGTGTCTGTCTGTTTTTTGTTGTTGTTGAGATATTTATGGTGCTTCGAATCCAAGTTCGAACCGATCGCAAAAACCCGATATAAATAGGTTTGCGCGCGCTACCGGGTGAGTAAAAAAAAACAACCGTTCTGCTCTTCCGTCATATCCTCTGCCGCTCCCGCTTTCCCTCATAGCCCCTTCAGTTCTAATTGTGTTGCGATCAAAAACCTGAAAGTTATCAGATCGCGGGCGTTCAGGAAAATCACCTACACACACATGCACGAACTCGAATGCACTTTGGGTGGTACGCGCGGCGTACATTGCACCCGAGGAATTTGGGTGCATTTGCAGCACAGTGACACACGTCGCGTCGTGCAATCGGGTTTTCGCTTTAGAACCAAACAAAAAAAAAACAGCAAAAAGCCTTTTAGAAAGCCAACTTCCTAATGGATAACCTGCGACGTATCATTCATCTTTCCAGGGACTTTCCGGTGGACGGGGCGGTACAGGAGGACGCACCGGGCAGCCTAGCCGACGCGTGCACCACCACGAGTGGGAGCATCATCCGTTCCCTCCGCGCCGAGGACGGTTGTTGCCCCGTCCTCGTTCTCCGGCTTTACCGCACACCGGGGCGACGAAAC]
consensusID : consensus_3831#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 477 fasta sequence
[CCGCGGTGTTGTTATTTGTTTTGCTTCTAGCGACTTTGGGGCGTTTCGATTCGTCTCTTTGTTGGTGGTGAAAAGCGGCATCCAAACGAAGCTGCCGTCGAGCTTAAAGGAAACAGCCGGACACTGCAAACATTTTGTTCCCTTGCTTGCGTTTAGGCATTGAAGAAAAACTCTCCCCCAGCGCCTGTAACAGCTCCTCTGTCTCTCTGACATTGCCGTTCGATGTGGCTCAGTATAGTGTCATGTCATTGTGAATGATATTGTAAAAGTGCAAAGATTGTCGAACTAGCCAGTGCCATTATTAACCCCATGTTTTGTTTTCCAACTTTTCCTTTAAGGGTGCAGCGTGACCGGTTAGCTTTTCCTGCTCCTTTTCGGTCCCGGTCCCGGTCGTCGGCTGTACGTTCGTCGCTTGTACCGCTCCGCAAGCGTAGGCATCACCGCATACGTCAGCAGCAGCACGGGAGCAACGGAAAC]
[+] EMBL BM638277 [CCGCGGTGTTGTTATTTGTTTTGCTTCTAGCGACTTTGGGGCGTTTCGATTCGTCTCTTTGTTGGTGGTGAAAAGCGGCATCCAAACGAAGCTGCCGTCGAGCTTAAAGGAAACAGCCGGACACTGCAAACATTTTGTTCCCTTGCTTGCGTTTAGGCATTGAAGAAAAACTCTCCCCCAGCGCCTGTAACAGCTCCTCTGTCTCTCTGACATTGCCGTTCGATGTGGCTCAGTATAGTGTCATGTCATTGTGAATGATATTGTAAAAGTGCAAAGATTGTCGAACTAGCCAGTGCCATTATTAACCCCATGTTTTGTTTTCCAACTTTTCCTTTAAGGGTGCAGCGTGACCGGTTAGCTTTTCCTGCTCCTTTTCGGTCCCGGTCCCGGTCGTCGGCTGTACGTTCGTCGCTTGTACCGCTCCGCAAGCGTAGGCATCACCGCATACGTCAGCAGCAGCACGGGAGCAACGGAAAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3831#0 CCGGCTGGGTGAAGTCATACTAGAGCGCAAAGGGTGCAGCGTGACCGGTTAGCTT-TTCC 59
consensus_3831#2 ---------------------------------CCGCGGTGTTGTTATTTGTTTTGCTTC 27
consensus_3831#1 CCGGCTTGTGTGTGTGTGTCTGTCTGTTTTTTGTTGTTGTTGAGATATTTATGGTGCTTC 60
* * ** * * *
consensus_3831#0 TGCTCCTTTTCGGTCCCGGTCCCGGTCGTCGGCTGTACGTTCGTC-GCTTGTACCGCTCC 118
consensus_3831#2 TAGCGACTTTGGGGC---GTTTCGAT--TCGTCTCTTTGTTGGTG-GTGAAAAGCGGCAT 81
consensus_3831#1 GAATCCAAGTTCGAACCGATCGCAAAAACCCGATATAAATAGGTTTGCGCGCGCTACCGG 120
* * * * * * * * ** *
consensus_3831#0 GCAAGCGTAGGCATCACCGCATACGTCAGCAGCAGCACGGGAGCAACGGAAACAGTGAAG 178
consensus_3831#2 CCAAACGAAGCTGCCGTCGAGCTTAAAGGAAACAGC-CGGACACTGCAAACATTTTGTTC 140
consensus_3831#1 GTGAGTAAAAAAAAACAACCGTTCTGCTCTTCCGTCATATCCTCTGCCGCTCCCGCTTTC 180
* * * * * *
consensus_3831#0 CATCACCACGCGCACCCACCTGACAAACATACCCGCAACCCGCAGAGCCGAGGGCAGCCG 238
consensus_3831#2 CCTTGCT-TGCGTTTAGGCATTGAAGAAAAACTCTC---CCCCAGCGCCTGTAACAGCTC 196
consensus_3831#1 CCTCATAGCCCCTTCAGTTCTAATTGTGTTGCGATC-----AAAAACCTGAAAGTTATCA 235
* * * * * * * *
consensus_3831#0 AGCCGTGC-CGTGGCAGAGAGAGAGAGAGAGAGAGAGAGA-GAGAGAGAGAGAGAGAGAG 296
consensus_3831#2 CTCTGTCT-CTCTGACATTGCCGTTCGATGTGGCTCAGTA-TAGTGTCAT---------G 245
consensus_3831#1 GATCGCGGGCGTTCAGGAAAATCACCTACACACACATGCACGAACTCGAATGCACTTTGG 295
* * * * * * *
consensus_3831#0 AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG-AGAGAGAGA 355
consensus_3831#2 TCATTGTGAATGATATTGTAAAAGTGCAAAGATTGTCGAACTAGCCAGTG-CCATTATTA 304
consensus_3831#1 GTGGTACGCGCGGCGTACATTGCACCCGAGGAATTTGGGTGCATTTGCAGCACAGTGACA 355
* * * * * * * *
consensus_3831#0 GAGCTTGTGT-GTGTGTGTCTGTCTGTTTTTTGTTGTTGTTGAGATATTTATGGTGCTTC 414
consensus_3831#2 ACCCCATGTT-TTGTTTTCCAACTTTTCCTTTAAGGGTGCAGCGTGACCGGTTA-GCTTT 362
consensus_3831#1 CACGTCGCGTCGTGCAATCGGGTTTTCGCTTTAGAACCAAACAAAAAAAAAACA-GCAAA 414
* ** * *** * **
consensus_3831#0 GAATCCAAGTTCGAACCGA-TCGCAAAAACCCGATATAAATAGGTTTGCGCGCGCTACCG 473
consensus_3831#2 ---TCCTGCTCCTTTTCGG-TCCCGGT--CCCGGT--CGTCGGCTGTACGTTCGTCGCTT 414
consensus_3831#1 AAGCCTTTTAGAAAGCCAACTTCCTAATGGATAACCTGCGACGTATCATTCATCTTTCCA 474
* * * * * *
consensus_3831#0 GGGACTTTCCGGTGGACGGGGCGGTACAGGAGGACGCACCGGGCAGCCTAGCCGACGCGT 533
consensus_3831#2 GTACCGCTCCGCAAGCGTAGGCATCACCGCAT-ACGTCAGCAGCAGCACGGGAGCAACGG 473
consensus_3831#1 GGGACTTTCCGGTGGACGGGGCGGTACAGGAGGACGCACCGGGCAGCCTAGCCGACGCGT 534
* * **** * *** ** * * *** ***** * * **
consensus_3831#0 GCACCACCACGAGTGGGAGCATCATCCGTTCC-TCCGCGCCGAGGACGGTTGTTGCCCCG 592
consensus_3831#2 AAAC-------------------------------------------------------- 477
consensus_3831#1 GCACCACCACGAGTGGGAGCATCATCCGTTCCCTCCGCGCCGAGGACGGTTGTTGCCCCG 594
**
consensus_3831#0 TCCTCGTTCTCCGGCTTTACCGCACACCGGGGCGACGAAACCCGCCGGCAGCTGGGAGCA 652
consensus_3831#2 ------------------------------------------------------------
consensus_3831#1 TCCTCGTTCTCCGGCTTTACCGCACACCGGGGCGACGAAAC------------------- 635
consensus_3831#0 GCAGCAGCAGCAGCAGCAACCGGAGCAGCCCACCGTGCACGACC 696
consensus_3831#2 --------------------------------------------
consensus_3831#1 --------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||