Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 3981 cluster # 3981       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3981#0 length = 1597 sequences # 3  

consensusID : consensus_3981#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1597
fasta sequence
                              [AGATCGCCCGAGGTTTATGTCTCTAGTGCTGTCGGGAAAATTAGTAGTTTCACAGAATCAAAAAGCGCTTCATATAGTATTTCCACATCAGTTTCTCGATTCACCCGAATGGTTCGGTGTTTCTACCGATGACTATTTTCAGGTGTCAATCATGGCGATGGAGGAGTCGCGTGTACTCATATGGCACCGGGATAAGCTGAAGCTTTCCATCATGGCGGAACCGTTCCTGCAGGCCGTGTTCGATCACATACTCGGACGGGATGTGGTGAAAAAATTAATGCAGGTCACACAGGTCAGCGAAACGATGGCGCAAAGCAACGGCTGCATTGCGTCAGGCTATGGCGACGACTCGGAAGATAAACCGATGCTGGTGATGAAGAGCAAAGGTACCGACAATGGGGGGCACGGGCTGACGGCCTTAATAAATCGCCAGCTGCAAGATGAGACCTTACCGCTTCTGNCGACCGTCGCCCTAAACTCTGGCAAAGCGCTGATTGAAAAGGTGTACCACGTGGTGGAGGTGGATTACGCGACCGCGCCTTCGCTTCGCCTTCGCTTCCGTCTAGCTGTTCGCCCTTTGGTTAGCTAGGGAACGGCGGGGGAACGGAGTCGTAGGAAGCGTCCGGAAGGAAAAGGCGCAGAGTGTGTGTTTCTTCCGGTAATGAGGAGCGCCGATTGCAAAGCCTGTTTGATAGTCATTTCCCGCGCTGCTTGTGGAAGCGTTACGGTAGCGCCAAACTGGAGAAAGCGTCCAAATATTACGATTAGGTTCACGAATAGCAGTGAAGCACTGACTCCCAAGCGGAAGAGACAGAGAGAAAAAAAACGTCGTCCTTATAAACCCACACACGGTCTTGTACTACTACACACCAACCACACACCACTACCCCGCAACATCCCATTTCGTTTCCGTGGAAAGCGTGGGACATAATTGCATGCCATTTTACGCCTAGTACACGTTTCCGTGTGTTCGTACTAAGTTATGTTAATTTTTCTAATTTTTATCTCTAATCACTACCAGTTAATGAGCGCGTTTTTGTGTTTTAGGGTGATTGTGATATACACTCCGAACGACTGTTAACATATGATTTACACAAATAGACTTAGAGGCAGTAACTAGCTGAGCGGCAAAAAGAAATTAAATGAATACAAGGAGAATAATACGCCTGAAAGTGGATATTATTACAGCTAGCACTTACTACCTTCCTACACATGTTCATTCAGAACTATTTCTGTTTTTTTTTAAAGTTTAATCTGTTCTATATCTTTTTCTGCGCTACACACTGTTTTGACTTAGTTCTTATTTTATCTCCAATGTGGTTTGTTCGCTTCCCGCTTGTTACTCGAGCATCATAAGTTACTACTTGTATTATTATTCTTTCTACAAACATATTTTCTAACGGTTCTGGATTCTTATCAACTCATTTGTATCGCATTCTTTATTTTTATTGAACTATCAAAGTGTTTTATTTTTTCAATTTATCTACACTTTGGCCCATTTGCCTCTCGGTGTTTTGCTTTCTCTCTTTATCCTGCTATTCTGCTACTATTCATTCTTTTTGTACTACTACCATTATTCACTGTATTCCTTTCTTGC]

[+] EMBL AL697163             [AGATCGCCCGAGGTTTATGTCTCTAGTGCTGTCGGGAAAATTAGTAGTTTCACAGAATCAAAAAGCGCTTCATATAGTATTTCCACATCAGTTTCTCGATTCACCCGAATGGTTCGGTGTTTCTACCGATGACTATTTTCAGGTGTCAATCATGGCGATGGAGGAGTCGCGTGTACTCATATGGCACCGGGATAAGCTGAAGCTTTCCATCATGGCGGAACCGTTCCTGCAGGCCGTGTTCGATCACATACTCGGACGGGATGTGGTGAAAAAATTAATGCAGGTCACACAGGTCAGCGAAACGATGGCGCAAAGCAACGGCTGCATTGCGTCAGGCTATGGCGACGACTCGGAAGATAAACCGATGCTGGTGATGAAGAGCAAAGGTACCGACAATGGGGGGCACGGGCTGACGGCCTTAATAAATCGCCAGCTGCAAGATGAGACCTTACCGCTTCTGNCGACCGTCGCCCTAAACTCTGGCAAAGCGCTGATTGAAAAGGTGTACCACGTGGTGGAGGTGGATTACGCGACCGCGCCTTCGCTTCGCCTTCGCTTCCGTCTAGCTGTTCGCCCTTTGGTTAGCTAGGGAACGGCGGGGGAACGGAGTCGTAGGAAGCGTCCGGAAGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX608743             [                                                                                                                                                                                                    CTGAAGCTTTCCATCATGGCGGAACCGTTCCTGCAGGCCGTGTTCGATCACATACTCGGACGGGATGTGGTGAAAAAATTAATGCAGGTCACACAGGTCAGCGAAACGATGGCGCAAAGCAACGGCTGCATTGCGTCAGGCTATGGCGACGACTCGGAAGATAAACCGATGCTGGTGATGAAGAGCAAAGGTACCGACAATGGGGGGCACGGGCTGACGGCCTTAATAAATCGCCAGCTGCAAGATGAGACCTTACCGCTTCTGCCGACCGTCGCCCTAAACTCTGGCAAAGCGCTGATTGAAAAGGTGTACCACGTGGTGGAGGTGGATTA GCGACCGCGCCTTCGCTTCGCCTTCGCTTCCGTCTAGCTGTTCGCCCTTTGGTTAGCTAGGGAACGGCGGGGGAACGGAGTCGTAGGAAGCGTCCGGAAGGAAAAGGCGCAGAGTGTGTGTTTCTTCCGGTAATGAGGAGCGCCGATTGCAAAGCCTGTTTGATAGTCATTTCCCGCGCTGCTTGTGGAAGCGTTACGGTAGCGCCAAACTGGAGAAAGCGTCCAAATATTACGATTAGGTTCACGAATAGCAGTGAAGCACTGACTCCCAAGCGGAAGAGACAGAGAGAAAAAAAACGTCGTCCTTATAAACCCACACACGGTCTTGTACTACTACACACCAACCACACACCACTACCCCGCAACATCCCATTTCGTTTCCGTGGAAAGCGTGGGACATAATTGCATGCCATTTTACGCCTAGTACACGTTTCCGTGTGTTCGTACTAAGTTATGTTAATTTTTCTAATTTTTATCTCTAATCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM603581             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ccgCATTTTACGCCTAGTACACGGTTCCGTGTGTTCGTACTAAGTTATGTTAA  TTTCTAA TTTTATCTCTAATCACTACCAGTTAATGAGCGCGTTTTTGTGTTTTAGGGTGATTGTGATATACACTCCGAACGACTGTTAACATATGATTTACACAAATAGACTTAGAGGCAGTAACTAGCTGAGCGGCAAAAAGAAATTAAATGAATACAAGGAGAATAATACGCCTGAAAGTGGATATTATTACAGCTAGCACTTACTACCTTCCTACACATGTTCATTCAGAACTATTTCTGTTTTTTTTTAAAGTTTAATCTGTTCTATATCTTTTTCTGCGCTACACACTGTTTTGACTTAGTTCTTATTTTATCTCCAATGTGGTTTGTTCGCTTCCCGCTTGTTACTCGAGCATCATAAGTTACTACTTGTATTATTATTCTTTCTACAAACATATTTTCTAACGGTTCTGGATTCTTATCAACTCATTTGTATCGCATTCTTTATTTTTATTGAACTATCAAAGTGTTTTATTTTTTCAATTTATCTACACTTTGGCCCATTTGCCTCTCGGTGTTTTGCTTTCTCTCTTTATCCTGCTATTCTGCTACTATTCATTCTTTTTGTACTACTACCATTATTCACTGTATTCCTTTCTTGC]


>consensus_3981#0 AGATCGCCCGAGGTTTATGTCTCTAGTGCTGTCGGGAAAATTAGTAGTTTCACAGAATCA AAAAGCGCTTCATATAGTATTTCCACATCAGTTTCTCGATTCACCCGAATGGTTCGGTGT TTCTACCGATGACTATTTTCAGGTGTCAATCATGGCGATGGAGGAGTCGCGTGTACTCAT ATGGCACCGGGATAAGCTGAAGCTTTCCATCATGGCGGAACCGTTCCTGCAGGCCGTGTT CGATCACATACTCGGACGGGATGTGGTGAAAAAATTAATGCAGGTCACACAGGTCAGCGA AACGATGGCGCAAAGCAACGGCTGCATTGCGTCAGGCTATGGCGACGACTCGGAAGATAA ACCGATGCTGGTGATGAAGAGCAAAGGTACCGACAATGGGGGGCACGGGCTGACGGCCTT AATAAATCGCCAGCTGCAAGATGAGACCTTACCGCTTCTGNCGACCGTCGCCCTAAACTC TGGCAAAGCGCTGATTGAAAAGGTGTACCACGTGGTGGAGGTGGATTACGCGACCGCGCC TTCGCTTCGCCTTCGCTTCCGTCTAGCTGTTCGCCCTTTGGTTAGCTAGGGAACGGCGGG GGAACGGAGTCGTAGGAAGCGTCCGGAAGGAAAAGGCGCAGAGTGTGTGTTTCTTCCGGT AATGAGGAGCGCCGATTGCAAAGCCTGTTTGATAGTCATTTCCCGCGCTGCTTGTGGAAG CGTTACGGTAGCGCCAAACTGGAGAAAGCGTCCAAATATTACGATTAGGTTCACGAATAG CAGTGAAGCACTGACTCCCAAGCGGAAGAGACAGAGAGAAAAAAAACGTCGTCCTTATAA ACCCACACACGGTCTTGTACTACTACACACCAACCACACACCACTACCCCGCAACATCCC ATTTCGTTTCCGTGGAAAGCGTGGGACATAATTGCATGCCATTTTACGCCTAGTACACGT TTCCGTGTGTTCGTACTAAGTTATGTTAATTTTTCTAATTTTTATCTCTAATCACTACCA GTTAATGAGCGCGTTTTTGTGTTTTAGGGTGATTGTGATATACACTCCGAACGACTGTTA ACATATGATTTACACAAATAGACTTAGAGGCAGTAACTAGCTGAGCGGCAAAAAGAAATT AAATGAATACAAGGAGAATAATACGCCTGAAAGTGGATATTATTACAGCTAGCACTTACT ACCTTCCTACACATGTTCATTCAGAACTATTTCTGTTTTTTTTTAAAGTTTAATCTGTTC TATATCTTTTTCTGCGCTACACACTGTTTTGACTTAGTTCTTATTTTATCTCCAATGTGG TTTGTTCGCTTCCCGCTTGTTACTCGAGCATCATAAGTTACTACTTGTATTATTATTCTT TCTACAAACATATTTTCTAACGGTTCTGGATTCTTATCAACTCATTTGTATCGCATTCTT TATTTTTATTGAACTATCAAAGTGTTTTATTTTTTCAATTTATCTACACTTTGGCCCATT TGCCTCTCGGTGTTTTGCTTTCTCTCTTTATCCTGCTATTCTGCTACTATTCATTCTTTT TGTACTACTACCATTATTCACTGTATTCCTTTCTTGC



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)