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Anopheles gambiae
cluster # 4075 cluster # 4075       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4075#0 length = 937 sequences # 2  
consensus_4075#1 length = 608 sequences # 1  

consensusID : consensus_4075#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 937
fasta sequence
                              [ACCAAAACAAAAAATCACAACAAACTGGTGGTAAATGATTCCACACGCAATATTTCTTTTATTTTTTGTTGAGTTCAACACAACACAAAACATCACATAATGGTAATCCGGAAGTACCTTTGTTCGGCCTTCTCCTCACTCATCTCTGCCCGTTGTCTTTCTAGCGTAAAAGCCTCGTGCCACAGCGATGCACACCGTCGAATGCCGTTCACTCGCCGTTCAAAAGCCCGCTTTCGGCACAAAAGCGCCAGCGCGGAATGCCGCAAGCGATGGCACGGGTGTGGCGCGATGGGCAGAAGAAACCGTGCTTTATCTACCGGCTGCTAGCGACCGGCACGATCGAGGAGAAGATTTTCCAGCGCCAAACGCACAAAAAAGCCCTCTCGACGACGGTGGTGGACAATGCGGAGGACGGCGAGCGGCACTTCACGCAGGACGATCTGAAGGACCTGTTCAAGTTGGACGAGCAGACGCGCTCCGACACGCACGACATCTTCCGCTGCAAGCTG-GCACCAATGGGGTGCAGATGAAGCTGCCGCCGGACGACAGTTACTGCATGTCCGATCTGGCCCACTGGTATCACTGCGCGAACAATAAGGGCATCCCGGACGATATACTGTCCAAATCGTGGGACATTACGCGGTGCGTGTCGTTCGTGTTTCACCACCGGTCGAACTCGGCCGTCGTGGAGCAGCAGCTGGCGGA-CAGCGGCGCCA-CAGGGCTCTGGCCAAGGAGCGGGAGGAAAAGGAGGAGGAAGAAGAGGAGGAGGAGGATAAGGAAAACAAAGGGTACAACACGGAAGGGGAAGAGGAGGAGGAGGAGCCGGAAGATGATGAAAAGGATAAAGATTTTGTGTTGTAGTGTGTAACACGGCGCCGCACATTCGCCGCTAATTGGGCACGATGTAAATTTTTATTAAAAACGAAAAAAACGAAAA]

[+] EMBL CNS09P7K             [ACCAAAACAAAAAATCACAACAAACTGGTGGTAAATGATTCCACACGCAATATTTCTTTTATTTTTTGTTGAGTTCAACACAACACAAAACATCACATAATGGTAATCCGGAAGTACCTTTGTTCGGCCTTCTCCTCACTCATCTCTGCCCGTTGTCTTTCTAGCGTAAAAGCCTCGTGCCACAGCGATGCACACCGTCGAATGCCGTTCACTCGCCGTTCAAAAGCCCGCTTTCGGCACAAAAGCGCCAGCGCGGAATGCCGCAAGCGATGGCACGGGTGTGGCGCGATGGGCAGAAGAAACCGTGCTTTATCTACCGGCTGCTAGCGACCGGCACGATCGAGGAGAAGATTTTCCAGCGCCAAACGCACAAAAAAGCCCTCTCGACGACGGTGGTGGACAATGCGGAGGACGGCGAGCGGCACTTCACGCAGGACGATCTGAAGGACCTGTTCAAGTTGGACGAGCAGACGCGCTCCGACACGCACGACATCTTCCGCTGCAAGCTG GCACCAATGGGGTGCAGATGAAGCTGCCGCCGGACGACAGTTACTGCATGTCCGATCTGGCCCACTGGTATCACTGCGCGAACAATAAGGGCATCCCGGACGATATACTGTCCAAATCGTGGGACATTACGCGGTGCGTGTCGTTCGTGTTTCACCACCGGTCGAACTCGGCCGTCGTGGAGCAGCAGCTGGCGGA CAGCGGCGCCA CAGGGCTCTGGCCAAGGAGCGGGAGGAAAAGGAGGAGGAAGAAGAGGAGGAGGAGGATAAGGAAAACAAAGGGTACAACACGGAAGGGGAAGAGGAGGAGGAGGAGCCGGAAGATGATGAAAAGGATAAAGATTTTGTGTTGTAGTGTGTAACACGGCGCCGC                                                          ]
[-] EMBL CNS09P7L             [                                                                                                                                                                                                                                                                                                                                                                                                                                       ACTTCACGCAGGACGATCTGAAGGACCTGTTCAAGTTGGACGAGAAAACGCGCTCCCAAACGCACCACATCTTCCGCTGCAAGCGGTGCACCAATGGGGTGCAGATGAAGCTGCCCCCGGACCACAGTAACTGCATGTCCGGTCTGGCCCACTGGTATCACTGCGCGAACAATAAGGGCATCCCGGACGATATACTGTCCAAATCGTGGGACATTACGCGGTGCGTGTCGTTCGTGTTTCACCACCGGTCGAACTCGGCCGTCGTGGAGCAGCCGCTGGCGGAGCAGCGGCGCCAGCA GGCTCTGGCCAAGGAGCGGGAGGAAAAGGAGGAGGAAGAAGAGGAGGAGGAGGATAAGGAAAACAAAGGGTACAACACGGAAGGGGAAGAGGAGGAGGAGGAGCCGGAAGATGATGAAAAGGATAAAGATTTTGTGTTGTAGTGTGTAACACGGCGCCGCACATTCGCCGCTAATTGGGCACGATGTAAATTTTTATTAAAAACGAAAAAAACGAAAA]


>consensus_4075#0 ACCAAAACAAAAAATCACAACAAACTGGTGGTAAATGATTCCACACGCAATATTTCTTTT ATTTTTTGTTGAGTTCAACACAACACAAAACATCACATAATGGTAATCCGGAAGTACCTT TGTTCGGCCTTCTCCTCACTCATCTCTGCCCGTTGTCTTTCTAGCGTAAAAGCCTCGTGC CACAGCGATGCACACCGTCGAATGCCGTTCACTCGCCGTTCAAAAGCCCGCTTTCGGCAC AAAAGCGCCAGCGCGGAATGCCGCAAGCGATGGCACGGGTGTGGCGCGATGGGCAGAAGA AACCGTGCTTTATCTACCGGCTGCTAGCGACCGGCACGATCGAGGAGAAGATTTTCCAGC GCCAAACGCACAAAAAAGCCCTCTCGACGACGGTGGTGGACAATGCGGAGGACGGCGAGC GGCACTTCACGCAGGACGATCTGAAGGACCTGTTCAAGTTGGACGAGCAGACGCGCTCCG ACACGCACGACATCTTCCGCTGCAAGCTGGCACCAATGGGGTGCAGATGAAGCTGCCGCC GGACGACAGTTACTGCATGTCCGATCTGGCCCACTGGTATCACTGCGCGAACAATAAGGG CATCCCGGACGATATACTGTCCAAATCGTGGGACATTACGCGGTGCGTGTCGTTCGTGTT TCACCACCGGTCGAACTCGGCCGTCGTGGAGCAGCAGCTGGCGGACAGCGGCGCCACAGG GCTCTGGCCAAGGAGCGGGAGGAAAAGGAGGAGGAAGAAGAGGAGGAGGAGGATAAGGAA AACAAAGGGTACAACACGGAAGGGGAAGAGGAGGAGGAGGAGCCGGAAGATGATGAAAAG GATAAAGATTTTGTGTTGTAGTGTGTAACACGGCGCCGCACATTCGCCGCTAATTGGGCA CGATGTAAATTTTTATTAAAAACGAAAAAAACGAAAA



consensusID : consensus_4075#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 608
fasta sequence
                              [GCAAGAATTCCCGCACGAGGATCTTCATGCTCAGCTCGAAGGCGGGCGGCTGCGGGTTGAATCTGATCGGTGCCAACCGGCTGGTCATAGTTCGATCCCGACTGGAACCCGGCGAACGATGAGCAAGCGATGGCACGGGTGTGGCGCGATGGGCAGAAGAAACCGTGCTTTATCTACCGGCTGCTAGCGACCGGCACGATCGAGGAGAAGATTTTCCAGCGCCAAACGCACAAAAAAGCCCTCTCGACGACGGTGGTGGACAATGCGGAGGACGGCGAGCGGCACTTCACGCAGGACGATCTGAAGGACCTGTTCAAGTTGGACGAGCAGACGCGCTCCGACACGCACGACATCTTCCGCTGCAAGCGGTGCACCAATGGGGTGCAGATGAAGCTGCCGCCGGACGACAGTGACTGCATGTCCGATCTGGCCCACTGGTATCACTGCGCGAACAAGTAAGGGCATCCCGGACGATATACTGTCCAAATCGTGGGACATTACGCGGTGCGTGTCGTTACGTGTTTCACCACCGGTCGAACTCGGCCGTCGTGGAGCAGCAGCTGGCGGAGCAGCGGCGCCAGCAGGCTCTGGCCAAGGAGCGGGAGGAA]

[+] EMBL BX468269             [GCAAGAATTCCCGCACGAGGATCTTCATGCTCAGCTCGAAGGCGGGCGGCTGCGGGTTGAATCTGATCGGTGCCAACCGGCTGGTCATAGTTCGATCCCGACTGGAACCCGGCGAACGATGAGCAAGCGATGGCACGGGTGTGGCGCGATGGGCAGAAGAAACCGTGCTTTATCTACCGGCTGCTAGCGACCGGCACGATCGAGGAGAAGATTTTCCAGCGCCAAACGCACAAAAAAGCCCTCTCGACGACGGTGGTGGACAATGCGGAGGACGGCGAGCGGCACTTCACGCAGGACGATCTGAAGGACCTGTTCAAGTTGGACGAGCAGACGCGCTCCGACACGCACGACATCTTCCGCTGCAAGCGGTGCACCAATGGGGTGCAGATGAAGCTGCCGCCGGACGACAGTGACTGCATGTCCGATCTGGCCCACTGGTATCACTGCGCGAACAAGTAAGGGCATCCCGGACGATATACTGTCCAAATCGTGGGACATTACGCGGTGCGTGTCGTTACGTGTTTCACCACCGGTCGAACTCGGCCGTCGTGGAGCAGCAGCTGGCGGAGCAGCGGCGCCAGCAGGCTCTGGCCAAGGAGCGGGAGGAA]


>consensus_4075#1 GCAAGAATTCCCGCACGAGGATCTTCATGCTCAGCTCGAAGGCGGGCGGCTGCGGGTTGA ATCTGATCGGTGCCAACCGGCTGGTCATAGTTCGATCCCGACTGGAACCCGGCGAACGAT GAGCAAGCGATGGCACGGGTGTGGCGCGATGGGCAGAAGAAACCGTGCTTTATCTACCGG CTGCTAGCGACCGGCACGATCGAGGAGAAGATTTTCCAGCGCCAAACGCACAAAAAAGCC CTCTCGACGACGGTGGTGGACAATGCGGAGGACGGCGAGCGGCACTTCACGCAGGACGAT CTGAAGGACCTGTTCAAGTTGGACGAGCAGACGCGCTCCGACACGCACGACATCTTCCGC TGCAAGCGGTGCACCAATGGGGTGCAGATGAAGCTGCCGCCGGACGACAGTGACTGCATG TCCGATCTGGCCCACTGGTATCACTGCGCGAACAAGTAAGGGCATCCCGGACGATATACT GTCCAAATCGTGGGACATTACGCGGTGCGTGTCGTTACGTGTTTCACCACCGGTCGAACT CGGCCGTCGTGGAGCAGCAGCTGGCGGAGCAGCGGCGCCAGCAGGCTCTGGCCAAGGAGC GGGAGGAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4075#0      ACCAAAACAAAAAATCACAACAAACTGGTGGTAAATGATTCCACACGCAATATTTCTTTT 60
consensus_4075#1      ------------------------------------------------------------
                                                                                  

consensus_4075#0      ATTTTTTGTTGAGTTCAACACAACACAAAACATCACATAATGGTAATCCGGAAGTACCTT 120
consensus_4075#1      ------------------------------------------------------------
                                                                                  

consensus_4075#0      TGTTCGGCCTTCTCCTCACTCATCTCTGCCCGTTGTCTTTCTAGCGTAAA--AGCCTCGT 178
consensus_4075#1      ---------------GCAAGAATTCCCGCACGAGGATCTTCATGCTCAGCTCGAAGGCGG 45
                                      **   **  * ** **  *   ***  **  *         ** 

consensus_4075#0      GCCACAGCGATGCACACCGTCGAATGCCGTTCACTCGCCGTTCAAAAGCCCGCTTTCGGC 238
consensus_4075#1      GCGGCTGCGGGTTGAATC--TGATCGGTGCCAACCGGCTGGTCATA-GTTCGATCCCGAC 102
                      **  * ***      * *   **  *  *   **  ** * *** * *  ** *  ** *

consensus_4075#0      ACAAAAGCGCCAGCGCGGAATGCCGCAAGCGATGGCACGGGTGTGGCGCGATGGGCAGAA 298
consensus_4075#1      TGGAAC---CCGGCGAACGATGA-GCAAGCGATGGCACGGGTGTGGCGCGATGGGCAGAA 158
                         **    ** ***    ***  ************************************

consensus_4075#0      GAAACCGTGCTTTATCTACCGGCTGCTAGCGACCGGCACGATCGAGGAGAAGATTTTCCA 358
consensus_4075#1      GAAACCGTGCTTTATCTACCGGCTGCTAGCGACCGGCACGATCGAGGAGAAGATTTTCCA 218
                      ************************************************************

consensus_4075#0      GCGCCAAACGCACAAAAAAGCCCTCTCGACGACGGTGGTGGACAATGCGGAGGACGGCGA 418
consensus_4075#1      GCGCCAAACGCACAAAAAAGCCCTCTCGACGACGGTGGTGGACAATGCGGAGGACGGCGA 278
                      ************************************************************

consensus_4075#0      GCGGCACTTCACGCAGGACGATCTGAAGGACCTGTTCAAGTTGGACGAGCAGACGCGCTC 478
consensus_4075#1      GCGGCACTTCACGCAGGACGATCTGAAGGACCTGTTCAAGTTGGACGAGCAGACGCGCTC 338
                      ************************************************************

consensus_4075#0      CGACACGCACGACATCTTCCGCTGCAAGCTG-GCACCAATGGGGTGCAGATGAAGCTGCC 537
consensus_4075#1      CGACACGCACGACATCTTCCGCTGCAAGCGGTGCACCAATGGGGTGCAGATGAAGCTGCC 398
                      ***************************** * ****************************

consensus_4075#0      GCCGGACGACAGTTACTGCATGTCCGATCTGGCCCACTGGTATCACTGCGCGAACAA-TA 596
consensus_4075#1      GCCGGACGACAGTGACTGCATGTCCGATCTGGCCCACTGGTATCACTGCGCGAACAAGTA 458
                      ************* ******************************************* **

consensus_4075#0      AGGGCATCCCGGACGATATACTGTCCAAATCGTGGGACATTACGCGGTGCGTGTCGTT-C 655
consensus_4075#1      AGGGCATCCCGGACGATATACTGTCCAAATCGTGGGACATTACGCGGTGCGTGTCGTTAC 518
                      ********************************************************** *

consensus_4075#0      GTGTTTCACCACCGGTCGAACTCGGCCGTCGTGGAGCAGCAGCTGGCGGA-CAGCGGCGC 714
consensus_4075#1      GTGTTTCACCACCGGTCGAACTCGGCCGTCGTGGAGCAGCAGCTGGCGGAGCAGCGGCGC 578
                      ************************************************** *********

consensus_4075#0      CACAGGGCTCTGGCCAAGGAGCGGGAGGAAAAGGAGGAGGAAGAAGAGGAGGAGGAGGAT 774
consensus_4075#1      CAGCAGGCTCTGGCCAAGGAGCGGGAGGAA------------------------------ 608
                      **   *************************                              

consensus_4075#0      AAGGAAAACAAAGGGTACAACACGGAAGGGGAAGAGGAGGAGGAGGAGCCGGAAGATGAT 834
consensus_4075#1      ------------------------------------------------------------
                                                                                  

consensus_4075#0      GAAAAGGATAAAGATTTTGTGTTGTAGTGTGTAACACGGCGCCGCACATTCGCCGCTAAT 894
consensus_4075#1      ------------------------------------------------------------
                                                                                  

consensus_4075#0      TGGGCACGATGTAAATTTTTATTAAAAACGAAAAAAACGAAAA 937
consensus_4075#1      -------------------------------------------
                                                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)