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Anopheles gambiae
cluster # 4100 cluster # 4100       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4100#0 length = 930 sequences # 3  

consensusID : consensus_4100#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 930
fasta sequence
                              [CACCGATCGCGAGTCGTTGTACAAGCACATCTCGAAGGAGTGTCTGCCGGCGGTTTACGGCGGTACAGTGGACGCACCCCGGGTACAGGGCGAACAGTGGTACGAGCTGCTGCTCAAGTGCGACAACGAGTACAAGGAGATCAACAACTACGGCTACATCAAGCAGCTGGAGGAGCAGCGCAACAAAAAGAACAAGAAGAAATGATATGTGCCGCATGGGAGCACAGGGAAGGTGATAGGAGTTCGGTACTCTTCGGAGCCCTGACGAAAACAGCCAGGTGGCGATTTTAACTTACAAAAAGGAAAAAAGACTCTTACTTCATCTGCGGCAAAGCGGCACGAACGGGGTTTG-TCGCCATGTGATTGCTTACATATTCCATTAACTGCAA--CGATTTA-CCCCA-------CCCCTCTCCCAAGGCACTTAAGCTCTACTACTACTACTACTAAAGTACGTTCTTTACACATTCACACCCCGTACGGATCCGGATAGGATTTTTAGGTTTAATGCCGCTGTCGCTACACACGGAAGGGTTTCGGGATTCACGGGAAGCACAAACACTGCACACGCGTTAGCTTAGCTAACCGGTCGCTACTACTTAGAAGTCAAATTGGGTACAAAAAGACCAGAATAGCGCGCTTGCACTATCTATCAATTATTTACCTAGATAGTGAACAAATTCTACTAAAACGAAGCAGAAGGCAAAAAACAAAAGGTGTGATACGATCTTTCCTTTCGAAACAGGCGTGATAGCTATATTTACTTTAGCAGCAGAAGAAGGGCTCAGCTTCGTTTGCTTGTACAGTTCTTTGCTGCATCATCATGAGAGAGACTGTATGCGAAGAGTAAAGTGAACGTAGGTTAAATTAT-CCACTTTTTTTAAATATTGTTATTAAGTATTGCGGTTAGAGCAATGGACAAATAAATAGTGTGGG]

[+] EMBL CNS09GNU             [CACCGATCGCGAGTCGTTGTACAAGCACATCTCGAAGGAGTGTCTGCCGGCGGTTTACGGCGGTACAGTGGACGCACCCCGGGTACAGGGCGAACAGTGGTACGAGCTGCTGCTCAAGTGCGACAACGAGTACAAGGAGATCAACAACTACGGCTACATCAAGCAGCTGGAGGAGCAGCGCAACAAAAAGAACAAGAAGAAATGATATGTGCCGCATGGGAGCACAGGGAAGGTGATAGGAGTTCGGTACTCTTCGGAGCCCTGACGAAAACAGCCAGGTGGCGATTTTAACTTACAAAAAGGAAAAAAGACTCTTACTTCATCTGCGGCAAAGCGGCACGAACGGGGTTTG TCGCCATGTGATTGCTTACATATTCCATTAACTGCAA  CGATTTA CCCCA       CCCCTCTCCCAAGGCACTTAAGCTCTACTACTACTACTACTAAAGTACGTTCTTTACACATTCACACCCCGTACGGATCCGGATAGGATTTTTAGGTTTAATGCCGCTGTCGCTACACACGGAAGGGTTTCGGGATTCACGGGAAGCACAAACACTGCACACGCGTTACTTTAGCTAACCGGTCGCTACTACTTAGAAGTCAAATTGGGTACAAAAAGACCAGAATAGCGCGCTTGCACTATCTATCAATTATTTACCTAGATAGTGAACAAATTCTACTAAAACGAAGCAGAAGGCAAAAAACAAAAGGTGTGATACGATCTTTCCTTTCGAAACAGGCGTGATAGCTATATTTACTTTAGCAGCAGAAGAAGGGCTCAGCTTCGTTTGCTTGTACAGTTCTTTGCTGCATCATCATGAGAGAGACTGTATGCGAAGAGTAAAGTGAACGTAGGTTAAATTAT CCACTTTTTTTAAATATTGTT                                            ]
[-] EMBL CNS09GNV             [                                                    GTTTACGGCGGTACAGTGGACGCACCCCGGGTACAGGGCGAACAGTGGTACGAGCTGCTGCTCAAGTGCGACAACGAGTACAAGGAGATCAACAACTACGGCTACATCAAGCAGCTGGAGGAGCAGCGCAACAAAAAGAACAAGAAGAAATGATATGTGCCGCATGGGAGCACAGGGAAGGTGATAGGAGTTCGGTACTCTTCGGAGCCCTGACGAAAACAGCCAGGTGGCGATTTTTACTTACAAAAAGGAAAAAAGATTCTTACTTCATCTGCGGCAAAGCGGCACGAACGGGGTTTG TCGCCATGTGATTGCTTACATATTCCATTAACTGCAA  CGATTTA CCCCC       CCCCTCTCCCAAGGCACTTAAGCTCTACTACTACTACTACTAAAGTACGTTCTTTACACATTCACACCCCGTACGGATCCGGATAGGATTTTTAGGTTTAATGGCCCTGTCGCTACACACGGAAGGGTTTCGGGATTCACGGGAAGCACAAACACTGTACACGCGTTAGCTTAGCTAACCGGTCGCTACTACTTAGAAGTCAAATTGGGTACAAAAAGACCAGAATAGCGCGCTTGCACTATCTATCAATTATTTACCTAGATAGTGAACAAATTCTACTAAAACGAAGCAGAAGGCAAAAAACAAAAGGTGTGATACGATCTTTCCTTTCGAAACAGGCGTGATAGCTATATTTACTTTAGCAGCAGAAGAAGGGCTCAGCTTCGTTTGCTTGTACAGTTCTTTGCTGCATCATCATGAGAGAGACTGTATGCGAAGAGTAAAGTGAACGTAGGTTAAATTATCCCACTTTTTTTAAATATTGTTATTAAGTATTGCGGTTAGAGCAATGGACAAATAAATAGTGTGGG]
[+] EMBL BM656669             [                                                                                                                                                         ccgCATCAAGCAGCTGGAGGAGCAGCGCAGCAAAAAGAACAAGAAGAAATGATGTGGGCCGCATGGGAGCACAGGGAAGGTGATAGGAGTTCGGCACTCTTCGGAGACCCGGCGGAGATACCCAGGTGGCGATGTTAACTTACAAAAAGGAAAAAAGACTCTTACTTCATCTGCGGCAAA  GGCGCCAGCGGGGTTTGCTCGCCATGTGATTGCTTACATATTCCATTAA TGCAAACCGATTTACCCCCACCCCCCCCCCCCCTCCAAAGGCACTAAAGCTCTACTACTACTACTACTAAAGTACGTTCTCTACACATTCACACCCCGTGCGGATCCGGATAGGATTTTTAGGTTTAATGCCGCTGTCGCTACACACGGAAGGGTTTCGGGATTCACGGGAAGCACAAACACTGCACACGCGTTAGCTTAGCTAACCGGTCGCTACTACTTAGAAGTCAAATTGGGTACAAAAAGACCAGAATAGCGCGCTTGCACTATCTATCAATTATTTACCTAGATAGTGAACAAATTCTACTAAAACGAAGCAGAAGGC                                                                                                                                                                                                                                         ]


>consensus_4100#0 CACCGATCGCGAGTCGTTGTACAAGCACATCTCGAAGGAGTGTCTGCCGGCGGTTTACGG CGGTACAGTGGACGCACCCCGGGTACAGGGCGAACAGTGGTACGAGCTGCTGCTCAAGTG CGACAACGAGTACAAGGAGATCAACAACTACGGCTACATCAAGCAGCTGGAGGAGCAGCG CAACAAAAAGAACAAGAAGAAATGATATGTGCCGCATGGGAGCACAGGGAAGGTGATAGG AGTTCGGTACTCTTCGGAGCCCTGACGAAAACAGCCAGGTGGCGATTTTAACTTACAAAA AGGAAAAAAGACTCTTACTTCATCTGCGGCAAAGCGGCACGAACGGGGTTTGTCGCCATG TGATTGCTTACATATTCCATTAACTGCAACGATTTACCCCACCCCTCTCCCAAGGCACTT AAGCTCTACTACTACTACTACTAAAGTACGTTCTTTACACATTCACACCCCGTACGGATC CGGATAGGATTTTTAGGTTTAATGCCGCTGTCGCTACACACGGAAGGGTTTCGGGATTCA CGGGAAGCACAAACACTGCACACGCGTTAGCTTAGCTAACCGGTCGCTACTACTTAGAAG TCAAATTGGGTACAAAAAGACCAGAATAGCGCGCTTGCACTATCTATCAATTATTTACCT AGATAGTGAACAAATTCTACTAAAACGAAGCAGAAGGCAAAAAACAAAAGGTGTGATACG ATCTTTCCTTTCGAAACAGGCGTGATAGCTATATTTACTTTAGCAGCAGAAGAAGGGCTC AGCTTCGTTTGCTTGTACAGTTCTTTGCTGCATCATCATGAGAGAGACTGTATGCGAAGA GTAAAGTGAACGTAGGTTAAATTATCCACTTTTTTTAAATATTGTTATTAAGTATTGCGG TTAGAGCAATGGACAAATAAATAGTGTGGG



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)