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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4275#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 684 fasta sequence
[CCGTACGAGGTGTAAAAATATTATGTTTACCTAAATTGATTGATAGCTTTGGAAGTCGCTTAAGATTTAGTTTGCTTGTTTGTTGTCATAGTTGATGCCACTTATGTAAATACAGAGTCGCACCTCTACACAGCCTAAACAATACACGCAATTTTACATCTATAACCTCTTCAGAAAGCCCGAACAGATCTAAAATGGCTGACTACTGGAAGTCGAATGATCGCAAGTACTGCGACTTTTGCAAGTGTTGGATAGCCGACAATAAATCCAGTGTTCAGTTCCACGAGAATGGAAAACGACATCAGATGAACGTACAAAAGCGTATTTCAGAGATAAGTCGAAATAGCTACAAAGCTCAGCAGGAGCAGAACAAAATCGATGCAGATTTGAAGAAAATGAATGATGCCGCCATGAAGGCTTACATGCAAGATATTAGCTCTGGAGCTGATATAAGTTCGCGGGAGTTAAACGAAAAGCAGAAACTCGAACAAGTGCAAGAAGCTTGCGGTCAAATCAACCCTCGTCCTGGACCGTCTGCAAGCAGCTCTGGAAACGCTGACAGCAGACCTGCGAAAGCGAAAAAAGCACGGGAAGCGGATCCATTGTATCTGCCAGGCGCAGAGAGCGAAGAAGATACAGAAAATGACAAGGGAAAGACATTGTCTAAGAAACGACACATCGAAA]
[+] EMBL BM623949 [CCGTACGAGGTGTAAAAATATTATGTTTACCTAAATTGATTGATAGCTTTGGAAGTCGCTTAAGATTTAGTTTGCTTGTTTGTTGTCATAGTTGATGCCACTTATGTAAATACAGAGTCGCACCTCTACACAGCCTAAACAATACACGCAATTTTACATCTATAACCTCTTCAGAAAGCCCGAACAGATCTAAAATGGCTGACTACTGGAAGTCGAATGATCGCAAGTACTGCGACTTTTGCAAGTGTTGGATAGCCGACAATAAATCCAGTGTTCAGTTCCACGAGAATGGAAAACGACATCAGATGAACGTACAAAAGCGTATTTCAGAGATAAGTCGAAATAGCTACAAAGCTCAGCAGGAGCAGAACAAAATCGATGCAGATTTGAAGAAAATGAATGATGCCGCCATGAAGGCTTACATGCAAGATATTAGCTCTGGAGCTGATATAAGTTCGCGGGAGTTAAACGAAAAGCAGAAACTCGAACAAGTGCAAGAAGCTTGCGGTCAAATCAACCCTCGTCCTGGACCGTCTGCAAGCAGCTCTGGAAACGCTGACAGCAGACCTGCGAAAGCGAAAAAAGCACGGGAAGCGGATCCATTGTATCTGCCAGGCGCAGAGAGCGAAGAAGATACAGAAAATGACAAGGGAAAGACATTGTCTAAGAAACGACACATCGAAA]
consensusID : consensus_4275#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 678 fasta sequence
[CGACCCACGCGTCCGGTTTACCTAAATTGATTGATAGCTTTGGAAGTCGCTTAAGATTTAGTTTGCTTGTTTGTTGTCATAGTTGATGCCACTTATGTAAATACAGAGTCGCACCTCTACACAGCCTAAACAATACACGCAATTTTACATCTATAACCTCTTCAGAAAGCCCGAACAGATCTAAAATGGCTGACTACTGGAAGTCGAATGATCGCAAGTACTGCGACTTTTGCAAGTGTTGGATAGCCGACAATAAATCCAGTGTTCAGTTCCACGAGAATGGAAAACGACATCAGATGAACGTACAAAAGCGTATTTCAGAGATAAGTCGAAATAGCTACAAAGCTCAGCAGGAGCAGAACAAAATCGATGCAGATTTGAAGAAAATGAATGATGCCGCCATGAAGGCTTACATGCAAGATATTAGCTCTGGAGCTGATATAAGTTCGCGGGAGTTAAACGAAAAGCAGAAACTCGAACAAGTGCAAGAAGCTTGCGGTCAAATCAACCCTCGTCCTGGACCGTCTGCAAGCAGCTCTGGAAACGCTGACAGCAGACCTGCGAAAGCGAAAAAAGCACGGGAAGCGGATCCATTGTATCTGCCAGGCGCAGAGAGCGAAGAAGATACAGAAAATGGCAAGGGAAAGACATTGTCTAAGAAACGACACATCGAAAATA]
[+] EMBL BM615800 [CGACCCACGCGTCCGGTTTACCTAAATTGATTGATAGCTTTGGAAGTCGCTTAAGATTTAGTTTGCTTGTTTGTTGTCATAGTTGATGCCACTTATGTAAATACAGAGTCGCACCTCTACACAGCCTAAACAATACACGCAATTTTACATCTATAACCTCTTCAGAAAGCCCGAACAGATCTAAAATGGCTGACTACTGGAAGTCGAATGATCGCAAGTACTGCGACTTTTGCAAGTGTTGGATAGCCGACAATAAATCCAGTGTTCAGTTCCACGAGAATGGAAAACGACATCAGATGAACGTACAAAAGCGTATTTCAGAGATAAGTCGAAATAGCTACAAAGCTCAGCAGGAGCAGAACAAAATCGATGCAGATTTGAAGAAAATGAATGATGCCGCCATGAAGGCTTACATGCAAGATATTAGCTCTGGAGCTGATATAAGTTCGCGGGAGTTAAACGAAAAGCAGAAACTCGAACAAGTGCAAGAAGCTTGCGGTCAAATCAACCCTCGTCCTGGACCGTCTGCAAGCAGCTCTGGAAACGCTGACAGCAGACCTGCGAAAGCGAAAAAAGCACGGGAAGCGGATCCATTGTATCTGCCAGGCGCAGAGAGCGAAGAAGATACAGAAAATGGCAAGGGAAAGACATTGTCTAAGAAACGACACATCGAAAATA]
consensusID : consensus_4275#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 511 fasta sequence
[AGAATCGCCGAGGCTAAATTGATTGATAGCTTTGGAAGTCGCTTAAGATTTAGTTTGCTTGTTTGTTGTCATAGTTGATGCCACTTATGTAAATACAGAGTCACACCTCTACACAGCCTAAACAATACACGCAATTTTACATCTATAACCTCTTCAGAAAGCCCGAACAGATCTAAAATGGCTGACTACTGGAAGTCGAATGATCGCAAGTACTGCGACTTTTGCAAGTGTTGGATAGCCGACAATAAATCCAGTGTTCAGTTCCACGAGAATGGAAAACGACATCAGATGAACGTACAAAAGCGTATTTCAGAGATAAGTCGAAATAGCTACAAAGCTCAGCAGGAGCAGAACAAAATCGATGCAGATTTGAAGAAAATGAATGATGCCGCCATGAAGGCTTACATGCAAGATATTAGCGCTGGAGCTGATATAAGTTCGCGGGAGTTAAACGAAAAGCAGAAACTCGAACAAGTGCAAGAAGCTTGCGGTCAAATCAGCCCTCGTCCTG]
[+] EMBL AL934975 [AGAATCGCCGAGGCTAAATTGATTGATAGCTTTGGAAGTCGCTTAAGATTTAGTTTGCTTGTTTGTTGTCATAGTTGATGCCACTTATGTAAATACAGAGTCACACCTCTACACAGCCTAAACAATACACGCAATTTTACATCTATAACCTCTTCAGAAAGCCCGAACAGATCTAAAATGGCTGACTACTGGAAGTCGAATGATCGCAAGTACTGCGACTTTTGCAAGTGTTGGATAGCCGACAATAAATCCAGTGTTCAGTTCCACGAGAATGGAAAACGACATCAGATGAACGTACAAAAGCGTATTTCAGAGATAAGTCGAAATAGCTACAAAGCTCAGCAGGAGCAGAACAAAATCGATGCAGATTTGAAGAAAATGAATGATGCCGCCATGAAGGCTTACATGCAAGATATTAGCGCTGGAGCTGATATAAGTTCGCGGGAGTTAAACGAAAAGCAGAAACTCGAACAAGTGCAAGAAGCTTGCGGTCAAATCAGCCCTCGTCCTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4275#0 CCGTACGAGGTGTAAAAATATTATGTTTACCTAAATTGATTGATAGCTTTGGAAGTCGCT 60
consensus_4275#1 ---------CGACCCACGCGTCCGGTTTACCTAAATTGATTGATAGCTTTGGAAGTCGCT 51
consensus_4275#2 -----------------AGAATCGCCGAGGCTAAATTGATTGATAGCTTTGGAAGTCGCT 43
******************************
consensus_4275#0 TAAGATTTAGTTTGCTTGTTTGTTGTCATAGTTGATGCCACTTATGTAAATACAGAGTCG 120
consensus_4275#1 TAAGATTTAGTTTGCTTGTTTGTTGTCATAGTTGATGCCACTTATGTAAATACAGAGTCG 111
consensus_4275#2 TAAGATTTAGTTTGCTTGTTTGTTGTCATAGTTGATGCCACTTATGTAAATACAGAGTCA 103
***********************************************************
consensus_4275#0 CACCTCTACACAGCCTAAACAATACACGCAATTTTACATCTATAACCTCTTCAGAAAGCC 180
consensus_4275#1 CACCTCTACACAGCCTAAACAATACACGCAATTTTACATCTATAACCTCTTCAGAAAGCC 171
consensus_4275#2 CACCTCTACACAGCCTAAACAATACACGCAATTTTACATCTATAACCTCTTCAGAAAGCC 163
************************************************************
consensus_4275#0 CGAACAGATCTAAAATGGCTGACTACTGGAAGTCGAATGATCGCAAGTACTGCGACTTTT 240
consensus_4275#1 CGAACAGATCTAAAATGGCTGACTACTGGAAGTCGAATGATCGCAAGTACTGCGACTTTT 231
consensus_4275#2 CGAACAGATCTAAAATGGCTGACTACTGGAAGTCGAATGATCGCAAGTACTGCGACTTTT 223
************************************************************
consensus_4275#0 GCAAGTGTTGGATAGCCGACAATAAATCCAGTGTTCAGTTCCACGAGAATGGAAAACGAC 300
consensus_4275#1 GCAAGTGTTGGATAGCCGACAATAAATCCAGTGTTCAGTTCCACGAGAATGGAAAACGAC 291
consensus_4275#2 GCAAGTGTTGGATAGCCGACAATAAATCCAGTGTTCAGTTCCACGAGAATGGAAAACGAC 283
************************************************************
consensus_4275#0 ATCAGATGAACGTACAAAAGCGTATTTCAGAGATAAGTCGAAATAGCTACAAAGCTCAGC 360
consensus_4275#1 ATCAGATGAACGTACAAAAGCGTATTTCAGAGATAAGTCGAAATAGCTACAAAGCTCAGC 351
consensus_4275#2 ATCAGATGAACGTACAAAAGCGTATTTCAGAGATAAGTCGAAATAGCTACAAAGCTCAGC 343
************************************************************
consensus_4275#0 AGGAGCAGAACAAAATCGATGCAGATTTGAAGAAAATGAATGATGCCGCCATGAAGGCTT 420
consensus_4275#1 AGGAGCAGAACAAAATCGATGCAGATTTGAAGAAAATGAATGATGCCGCCATGAAGGCTT 411
consensus_4275#2 AGGAGCAGAACAAAATCGATGCAGATTTGAAGAAAATGAATGATGCCGCCATGAAGGCTT 403
************************************************************
consensus_4275#0 ACATGCAAGATATTAGCTCTGGAGCTGATATAAGTTCGCGGGAGTTAAACGAAAAGCAGA 480
consensus_4275#1 ACATGCAAGATATTAGCTCTGGAGCTGATATAAGTTCGCGGGAGTTAAACGAAAAGCAGA 471
consensus_4275#2 ACATGCAAGATATTAGCGCTGGAGCTGATATAAGTTCGCGGGAGTTAAACGAAAAGCAGA 463
***************** ******************************************
consensus_4275#0 AACTCGAACAAGTGCAAGAAGCTTGCGGTCAAATCAACCCTCGTCCTGGACCGTCTGCAA 540
consensus_4275#1 AACTCGAACAAGTGCAAGAAGCTTGCGGTCAAATCAACCCTCGTCCTGGACCGTCTGCAA 531
consensus_4275#2 AACTCGAACAAGTGCAAGAAGCTTGCGGTCAAATCAGCCCTCGTCCTG------------ 511
************************************ ***********
consensus_4275#0 GCAGCTCTGGAAACGCTGACAGCAGACCTGCGAAAGCGAAAAAAGCACGGGAAGCGGATC 600
consensus_4275#1 GCAGCTCTGGAAACGCTGACAGCAGACCTGCGAAAGCGAAAAAAGCACGGGAAGCGGATC 591
consensus_4275#2 ------------------------------------------------------------
consensus_4275#0 CATTGTATCTGCCAGGCGCAGAGAGCGAAGAAGATACAGAAAATGACAAGGGAAAGACAT 660
consensus_4275#1 CATTGTATCTGCCAGGCGCAGAGAGCGAAGAAGATACAGAAAATGGCAAGGGAAAGACAT 651
consensus_4275#2 ------------------------------------------------------------
consensus_4275#0 TGTCTAAGAAACGACACATCGAAA--- 684
consensus_4275#1 TGTCTAAGAAACGACACATCGAAAATA 678
consensus_4275#2 ---------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||