Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 4298 cluster # 4298       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4298#0 length = 1400 sequences # 3  

consensusID : consensus_4298#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1400
fasta sequence
                              [CCGCGAACGTCGAGTGTACGCGGCGCGTGCTCAACCTGCTCAGCGGCGCCCGGCGCATCAAGTCCGTCATCCACGTGTCGACGTTCTACTCGAACTGCAACCGGACGCTAATCGAGGAGAAGATCTACGACGACATCGGGTTCGGCGGGTACGACAACATCAAGAGCACGTTCGCGAAGCTGCAGGACGATCACAAACAGTTCCTGTCGCCGGTCGTGCTCGGGACCTTCCCGAACTCGTACACGTTCAGCAAAAAGTGCGCCGAGGTGGTGGTGCGCGACAAGTTCGGCCATCTGCCGGTGGGCATCTTTCGGCCACCGACAGTGACCTCCAGCTACCGGGAGCCCGTACCTGGATGGGTCGATAACTTCAACGGTCCGAGCGGGCATGGTGGTGCCACTGTCCCAGGGGCTGTACAGTGCCGCCCTGCTCGATCCCAAAAAGAAGCCGTTCATCGTACCGGTCGACTTCTGCGTCAATGCGCTGCTGGTGTGCGCGCACGACGTGAGCAAGTCGAGCGTCACCAAGAGCATTCCCGTGTACAACTACACCGACGACTGCAACCTCTGGACCTGGGAGCCAGGTGATCAACGGATTCTTCAGCGGACTCGGACCAATCCGGAAACTAGTGGCAAAATACTTCACCGGCACAATCACGGTCAACCCGGTGCGGTACGCAATCTGCAAGCGAATCATGATGTTCCAGGCCTTCTGTTTGGATCTGATCCGCACATTCAGTGGAAAGGAAAAAATTATGCAACGATTGTTCTCCAAGATGGTGACGCTGAGCGAAGTGTTGCGCTTCTTCTGCCTGAACGACTGGAAGATGACGAACGACAACATCCGCCGGATCAGCGACGAGATGTCCCCGCTCGAGGCGGAGATGTTCCCGCTCGACATCAGGAAGATCGACTGGACCGAGTACTACCGGAACTTTGTGCCGGGCGTGATCAAGTACGCGGTGCAGCCGCGCAGCCCGCGCAGCCCCAGCATTGCGGAGCGGAAGCTGAAGGAGTCGAAGGTGCGGGAAACGAAAAAGCTCAACAGCGGCCTGTTCTACCTGCTGTGGAGCTCCGTGTTTATTATTGCGCTGAAGATATTCAAAAACCTCTTCAACAAGGTGTGAAGAACTTTCCAACTCCAAGTACGCTTCCAATTTATTTAGGGTTCAATTTAAGACGGAAAATGGGACACGAACACACACACACACACATACTCGTAAAGACACACACACACACACATACAAGCTGCAATCACAAGTACATGCTGATAAATAGGGGTAGTAGGTAATAAGGCAAATGGCGCAGAAGTATAGAGGTCCTGCCAATAAAAGACACGTCGCAAATTCACGTCGCCGCAAATGCGCTTGCGCAACCAGCAAACGAGCCAGCAAGCGGGCA]

[+] EMBL BM638303             [CCGCGAACGTCGAGTGTACGCGGCGCGTGCTCAACCTGCTCAGCGGCGCCCGGCGCATCAAGTCCGTCATCCACGTGTCGACGTTCTACTCGAACTGCAACCGGACGCTAATCGAGGAGAAGATCTACGACGACATCGGGTTCGGCGGGTACGACAACATCAAGAGCACGTTCGCGAAGCTGCAGGACGATCACAAACAGTTCCTGTCGCCGGTCGTGCTCGGGACCTTCCCGAACTCGTACACGTTCAGCAAAAAGTGCGCCGAGGTGGTGGTGCGCGACAAGTTCGGCCATCTGCCGGTGGGCATCTTTCGGCCACCGACAGTGACCTCCAGCTACCGGGAGCCCGTACCTGGATGGGTCGATAACTTCAACGGTCCGAGCGGGCATGGTGGTGCCACTGTCCCAGGGGCTGTACAGTGCCGCCCTGCTCGATCCCAAAAAGAAGCCGTTCATCGTACCGGTCGACTTCTGCGTCAATGCGCTGCTGGTGTGCGCGCACGACGTGAGCAAGTCGAGCGTCACCAAGAGCATTCCCGTGTACAACTACACCGACGACTGCAACCTCTGGACCTGGGAGCCAGGTGATCAACGGATTCTTCAGCGGACTCGGACCAATCCGGAAACTAGTGGCAAAATACTTCACCGGCACAATCACGGTCAACCCGGTGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM637277             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ccgTGCGTCAATGCGCTGCTGGTGTGCGCGCACGACGTGAGCAAGTCGAGCGTCACCAAGAGCATTCCCGTGTACAACTACACCGACGACTGCAACCTCTGGACCTGGGA CCAGGTGATCAACGGATTCTTCAGCGGACTCGGACCAATCCGGAAACTAGTGGCAAAATACTTCACCGGCACAATCACGGTCAACCCGGTGCGGTACGCAATCTGCAAGCGAATCATGATGTTCCAGGCCTTCTGTTTGGATCTGATCCGCACATTCAGTGGAAAGGAAAAAATTATGCAACGATTGTTCTCCAAGATGGTGACGCTGAGCGAAGTGTTGCGCTTCTTCTGCCTGAACGACTGGAAGATGACGAACGACAACATCCGCCGGATCAGCGACGAGATGTCCCCGCTCGAGGCGGAGATGTTCCCGCTCGACATCAGGAAGATCGACTGGACCGAGTACTACCGGAACTTTGTGCCGGGCGTGATCAAGTACGCGGTGCAGCCGCGCAGCCCGCGCAGCCCCAGCATTGCGGAGCGGAAGCTGAAGGAGTCGAAGGTGCGGGAAACGAAAAAGCTCAACAGCGGCCTGTTCTACCTGCTGTGGAGCTCCGTGTTTATTATTGCGCTGAAGATATTCAAAAACCTCTT                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX611914             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTCAGTGGAAAGGAAAAAATTATGCAACGATTGTTCTCCAAGATGGTGACGCTGAGCGAAGTGTTGCGCTTCTTCTGCCTGAACGACTGGAAGATGACGAACGACAACATCCGCCGGATCAGCGACGAGATGTCCCCGCTCGAGGCGGAGATGTTCCCGCTCGACATCAGGAAGATCGACTGGACCGAGTACTACCGGAACTTTGTGCCGGGCGTGATCAAGTACGCGGTGCAGCCGCGCAGCCCGCGCAGTCCCAGCATCGCGGAGCGGAAGCTGAAGGAGTCGAAGGTGCGGGAAACGAAAAAGCTCAACAGCGGCCTGTTCTACCTGCTGTGGAGCTCCGTGTTTATTATTGCGCTGAAGATATTCAAAAACCTCTTCAACAAGGTGTGAAGAACTTTCCAACTCCAAGTACGCTTCCAATTTATTTAGGGTTCAATTTAAGACGGAAAATGGGACACGAACACACACACACACACATACTCGTAAAGACACACACACACACACATACAAGCTGCAATCACAAGTACATGCTGATAAATAGGGGTAGTAGGTAATAAGGCAAATGGCGCAGAAGTATAGAGGTCCTGCCAATAAAAGACACGTCGCAAATTCACGTCGCCGCAAATGCGCTTGCGCAACCAGCAAACGAGCCAGCAAGCGGGCA]


>consensus_4298#0 CCGCGAACGTCGAGTGTACGCGGCGCGTGCTCAACCTGCTCAGCGGCGCCCGGCGCATCA AGTCCGTCATCCACGTGTCGACGTTCTACTCGAACTGCAACCGGACGCTAATCGAGGAGA AGATCTACGACGACATCGGGTTCGGCGGGTACGACAACATCAAGAGCACGTTCGCGAAGC TGCAGGACGATCACAAACAGTTCCTGTCGCCGGTCGTGCTCGGGACCTTCCCGAACTCGT ACACGTTCAGCAAAAAGTGCGCCGAGGTGGTGGTGCGCGACAAGTTCGGCCATCTGCCGG TGGGCATCTTTCGGCCACCGACAGTGACCTCCAGCTACCGGGAGCCCGTACCTGGATGGG TCGATAACTTCAACGGTCCGAGCGGGCATGGTGGTGCCACTGTCCCAGGGGCTGTACAGT GCCGCCCTGCTCGATCCCAAAAAGAAGCCGTTCATCGTACCGGTCGACTTCTGCGTCAAT GCGCTGCTGGTGTGCGCGCACGACGTGAGCAAGTCGAGCGTCACCAAGAGCATTCCCGTG TACAACTACACCGACGACTGCAACCTCTGGACCTGGGAGCCAGGTGATCAACGGATTCTT CAGCGGACTCGGACCAATCCGGAAACTAGTGGCAAAATACTTCACCGGCACAATCACGGT CAACCCGGTGCGGTACGCAATCTGCAAGCGAATCATGATGTTCCAGGCCTTCTGTTTGGA TCTGATCCGCACATTCAGTGGAAAGGAAAAAATTATGCAACGATTGTTCTCCAAGATGGT GACGCTGAGCGAAGTGTTGCGCTTCTTCTGCCTGAACGACTGGAAGATGACGAACGACAA CATCCGCCGGATCAGCGACGAGATGTCCCCGCTCGAGGCGGAGATGTTCCCGCTCGACAT CAGGAAGATCGACTGGACCGAGTACTACCGGAACTTTGTGCCGGGCGTGATCAAGTACGC GGTGCAGCCGCGCAGCCCGCGCAGCCCCAGCATTGCGGAGCGGAAGCTGAAGGAGTCGAA GGTGCGGGAAACGAAAAAGCTCAACAGCGGCCTGTTCTACCTGCTGTGGAGCTCCGTGTT TATTATTGCGCTGAAGATATTCAAAAACCTCTTCAACAAGGTGTGAAGAACTTTCCAACT CCAAGTACGCTTCCAATTTATTTAGGGTTCAATTTAAGACGGAAAATGGGACACGAACAC ACACACACACACATACTCGTAAAGACACACACACACACACATACAAGCTGCAATCACAAG TACATGCTGATAAATAGGGGTAGTAGGTAATAAGGCAAATGGCGCAGAAGTATAGAGGTC CTGCCAATAAAAGACACGTCGCAAATTCACGTCGCCGCAAATGCGCTTGCGCAACCAGCA AACGAGCCAGCAAGCGGGCA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)