These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_439#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 952 fasta sequence [GCAAGAATCCGCACGAGGCAGGAGAACGAGCCGGACAAGTCGCATGAAGCGCATGTGGGATTTAATGTTCGATGAAGCGCTGTTCAAGCATATGTGCTGGGTTGGATCTTCATCGAAAATTGCACTGCGCGATTATTACAACATCATCGATCTGTACAAGTACGGCGGCACTACCAACGTACACCGGGTAAATGACAATGAGGCGAGAAAGTTTTTATACAAAACCATGAAGTACGTGACAGACATGAGTTACCCAGAGAAATATTACGTGAAAAAGGCAGCGAATGCGAAATGTGGTAGCATTCGTAAACCAGCATCAAGAATGAGCTTAAACGTAAAGGAACAAAGCAGAGCAAAGCACCTACAGCAGGGTCAAAGCAAGCGACAGAATGAAATCGTTGAGCAGGAGGAGGATTGCTCGAATAAGAAAGATGGTTTGCAAAATGTACCTGAGCAACAATTACCAACGATTTGCGTAGGTTGCATAAAATCGGTAGAAGAATTGAATGCATTCGAAAACCGTTTAAATGACGAAAAAAGGCGAACGGAAATGCAAACGTGGGTCGACAAAACAGTCGGTCACGAGCCAAATGTGGAGCGTCGCATGGAGGCATTGCTGGAACGATTAATTGATACAAACATCTTACTCAACTTTTGCTGGGATGAACGTTAGCAAGTAGAAAAGGTGTACCGTTGTTAAAGTTCAAAAAACGTTGTCCCGACTGGTTTGAGTAACGGCTAGCAGAAACCAAAAGTTACACAACACGTATCCTCTATNACCATCCATTGGGTAATTGGTNTCCTAAGNATTCCTTTAATCCCGGAACGTTTTAGATTAACGTTGGGCGTTAAGAATAGGCGTTTCGTAACACAGGTATGGGATGGAAACTGGAAAAATTTAAAGTGTTGGTACCGTACGTTTAAGAGACNAAAGANAGAAAACANGGCATTT] [+] EMBL BX467462 [GCAAGAATCCGCACGAGGCAGGAGAACGAGCCGGACAAGTCGCATGAAGCGCATGTGGGATTTAATGTTCGATGAAGCGCTGTTCAAGCATATGTGCTGGGTTGGATCTTCATCGAAAATTGCACTGCGCGATTATTACAACATCATCGATCTGTACAAGTACGGCGGCACTACCAACGTACACCGGGTAAATGACAATGAGGCGAGAAAGTTTTTATACAAAACCATGAAGTACGTGACAGACATGAGTTACCCAGAGAAATATTACGTGAAAAAGGCAGCGAATGCGAAATGTGGTAGCATTCGTAAACCAGCATCAAGAATGAGCTTAAACGTAAAGGAACAAAGCAGAGCAAAGCACCTACAGCAGGGTCAAAGCAAGCGACAGAATGAAATCGTTGAGCAGGAGGAGGATTGCTCGAATAAGAAAGATGGTTTGCAAAATGTACCTGAGCAACAATTACCAACGATTTGCGTAGGTTGCATAAAATCGGTAGAAGAATTGAATGCATTCGAAAACCGTTTAAATGACGAAAAAAGGCGAACGGAAATGCAAACGTGGGTCGACAAAACAGTCGGTCACGAGCCAAATGTGGAGCGTCGCATGGAGGCATTGCTGGAACGATTAATTGATACAAACATCTTACTCAACTTTTGCTGGGATGAACGTTAGCAAGTAGAAAAGGTGTACCGTTGTTAAAGTTCAAAAAACGTTGTCCCGACTGGTTTGAGTAACGGCTAGCAGAAACCAAAAGTTACACAACACGTATCCTCTATNACCATCCATTGGGTAATTGGTNTCCTAAGNATTCCTTTAATCCCGGAACGTTTTAGATTAACGTTGGGCGTTAAGAATAGGCGTTTCGTAACACAGGTATGGGATGGAAACTGGAAAAATTTAAAGTGTTGGTACCGTACGTTTAAGAGACNAAAGANAGAAAACANGGCATTT] consensusID : consensus_439#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 731 fasta sequence [GTTTGAATGATCGCAACTTTCTGCAGAGGGTTCGCAGCTGGGTGAAGCGTATCGTTGCGCAGGAGAACGAGCCGGACAAGTGCATGAAGCGCATGTGGGACTTAATGTTCGATGAAGCGCTGTTCAAGCATATGTGCTGGGTTGGATCTTCATCGAAAATTGCACTGCGCGATTATTACAACATCATCGATCTGTACAAGTACGGCGGCACTACCAACGTACACCGGGTAAATGACAATGAGGCGAGAAAGTTTTTATACAAAACCATGAAGTACGTGACAGACATGAGTTACCCAGAGAAATACTACGTGAAAAAGGCAGCGAATGCGAAATGTGGTAGCATTCGTAAACCAGCATCAAGAATGAGCTTAAACGTGAAGGAACAAAGCAGAGCAAAGCACCTACAGCAGGGTCAAAGCAAGCGACAGAATGAAATCGTTGAGCAGGAGGAGGATTGCTCGAATAAGAAAGATGGTTTGCAAAATGTATCCGAGCAACAATTACCAACGATTTGCGTAGGTTGCATAAAATCGGTAGAAGAATTGAATGCATTCGAAAACCGTTTAAATGACAAAACAAGGCGAACGGAAATGGAAACGTGGGTCGACAAAACAGTCGGTCACGAGCCAAATGTGGAGCGTCGCATGGAGGCATTGCTGGAACGATTAATTGATACNAACATCTTACTCAACTTTTGCTGGATGAACGTTAGCAGTANAAAGTGTTCGTTG] [+] EMBL BX622386 [GTTTGAATGATCGCAACTTTCTGCAGAGGGTTCGCAGCTGGGTGAAGCGTATCGTTGCGCAGGAGAACGAGCCGGACAAGTGCATGAAGCGCATGTGGGACTTAATGTTCGATGAAGCGCTGTTCAAGCATATGTGCTGGGTTGGATCTTCATCGAAAATTGCACTGCGCGATTATTACAACATCATCGATCTGTACAAGTACGGCGGCACTACCAACGTACACCGGGTAAATGACAATGAGGCGAGAAAGTTTTTATACAAAACCATGAAGTACGTGACAGACATGAGTTACCCAGAGAAATACTACGTGAAAAAGGCAGCGAATGCGAAATGTGGTAGCATTCGTAAACCAGCATCAAGAATGAGCTTAAACGTGAAGGAACAAAGCAGAGCAAAGCACCTACAGCAGGGTCAAAGCAAGCGACAGAATGAAATCGTTGAGCAGGAGGAGGATTGCTCGAATAAGAAAGATGGTTTGCAAAATGTATCCGAGCAACAATTACCAACGATTTGCGTAGGTTGCATAAAATCGGTAGAAGAATTGAATGCATTCGAAAACCGTTTAAATGACAAAACAAGGCGAACGGAAATGGAAACGTGGGTCGACAAAACAGTCGGTCACGAGCCAAATGTGGAGCGTCGCATGGAGGCATTGCTGGAACGATTAATTGATACNAACATCTTACTCAACTTTTGCTGGATGAACGTTAGCAGTANAAAGTGTTCGTTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_439#0 -----------------------------------------GCAAGAATCCGCACGAGGC 19 consensus_439#1 GTTTGAATGATCGCAACTTTCTGCAGAGGGTTCGCAGCTGGGTGAAGCGTATCGTTGCGC 60 * * * ** consensus_439#0 AGGAGAACGAGCCGGACAAGTCGCATGAAGCGCATGTGGGATTTAATGTTCGATGAAGCG 79 consensus_439#1 AGGAGAACGAGCCGGACAAGT-GCATGAAGCGCATGTGGGACTTAATGTTCGATGAAGCG 119 ********************* ******************* ****************** consensus_439#0 CTGTTCAAGCATATGTGCTGGGTTGGATCTTCATCGAAAATTGCACTGCGCGATTATTAC 139 consensus_439#1 CTGTTCAAGCATATGTGCTGGGTTGGATCTTCATCGAAAATTGCACTGCGCGATTATTAC 179 ************************************************************ consensus_439#0 AACATCATCGATCTGTACAAGTACGGCGGCACTACCAACGTACACCGGGTAAATGACAAT 199 consensus_439#1 AACATCATCGATCTGTACAAGTACGGCGGCACTACCAACGTACACCGGGTAAATGACAAT 239 ************************************************************ consensus_439#0 GAGGCGAGAAAGTTTTTATACAAAACCATGAAGTACGTGACAGACATGAGTTACCCAGAG 259 consensus_439#1 GAGGCGAGAAAGTTTTTATACAAAACCATGAAGTACGTGACAGACATGAGTTACCCAGAG 299 ************************************************************ consensus_439#0 AAATATTACGTGAAAAAGGCAGCGAATGCGAAATGTGGTAGCATTCGTAAACCAGCATCA 319 consensus_439#1 AAATACTACGTGAAAAAGGCAGCGAATGCGAAATGTGGTAGCATTCGTAAACCAGCATCA 359 ***** ****************************************************** consensus_439#0 AGAATGAGCTTAAACGTAAAGGAACAAAGCAGAGCAAAGCACCTACAGCAGGGTCAAAGC 379 consensus_439#1 AGAATGAGCTTAAACGTGAAGGAACAAAGCAGAGCAAAGCACCTACAGCAGGGTCAAAGC 419 ***************** ****************************************** consensus_439#0 AAGCGACAGAATGAAATCGTTGAGCAGGAGGAGGATTGCTCGAATAAGAAAGATGGTTTG 439 consensus_439#1 AAGCGACAGAATGAAATCGTTGAGCAGGAGGAGGATTGCTCGAATAAGAAAGATGGTTTG 479 ************************************************************ consensus_439#0 CAAAATGTACCTGAGCAACAATTACCAACGATTTGCGTAGGTTGCATAAAATCGGTAGAA 499 consensus_439#1 CAAAATGTATCCGAGCAACAATTACCAACGATTTGCGTAGGTTGCATAAAATCGGTAGAA 539 ********* * ************************************************ consensus_439#0 GAATTGAATGCATTCGAAAACCGTTTAAATGACGAAAAAAGGCGAACGGAAATGCAAACG 559 consensus_439#1 GAATTGAATGCATTCGAAAACCGTTTAAATGACAAAACAAGGCGAACGGAAATGGAAACG 599 ********************************* *** **************** ***** consensus_439#0 TGGGTCGACAAAACAGTCGGTCACGAGCCAAATGTGGAGCGTCGCATGGAGGCATTGCTG 619 consensus_439#1 TGGGTCGACAAAACAGTCGGTCACGAGCCAAATGTGGAGCGTCGCATGGAGGCATTGCTG 659 ************************************************************ consensus_439#0 GAACGATTAATTGATACAAACATCTTACTCAACTTTTGCTGGGATGAACGTTAGCAAGTA 679 consensus_439#1 GAACGATTAATTGATACNAACATCTTACTCAACTTTTGCTGG-ATGAACGTTAGCA-GTA 717 ***************** ************************ ************* *** consensus_439#0 GAAAAGGTGTACCGTTGTTAAAGTTCAAAAAACGTTGTCCCGACTGGTTTGAGTAACGGC 739 consensus_439#1 NAAAGTGTTCGTTG---------------------------------------------- 731 *** ** * consensus_439#0 TAGCAGAAACCAAAAGTTACACAACACGTATCCTCTATNACCATCCATTGGGTAATTGGT 799 consensus_439#1 ------------------------------------------------------------ consensus_439#0 NTCCTAAGNATTCCTTTAATCCCGGAACGTTTTAGATTAACGTTGGGCGTTAAGAATAGG 859 consensus_439#1 ------------------------------------------------------------ consensus_439#0 CGTTTCGTAACACAGGTATGGGATGGAAACTGGAAAAATTTAAAGTGTTGGTACCGTACG 919 consensus_439#1 ------------------------------------------------------------ consensus_439#0 TTTAAGAGACNAAAGANAGAAAACANGGCATTT 952 consensus_439#1 --------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||