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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4504#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 903 fasta sequence
[CAGAATCNCGCACGAGGTGAAGTGTGAGGATTTCACAGAACTGGCAAGTACATAGCGGTCGCCCTGCTTGACACGACGGTGAAAATATTCTTCATGGACAGTCTCAAGTTTTATCTTTCTCTGTACGGCCATAAGCTGCCCGTAGTAACGATGGACATCTCGTACGATTCGACTCTCATCATAACGGGGTCGGCCGATCGTACGATAAAGATTTGGGGCATGGACTTTGGCGATTGCCATCGCTCGCTGCTTGCGCATGATAACACCGTGACGGCGGTTCAGTTCATCCCGAACACGCACATGTTCTTCTCTTGCGCCAAGGACGGCAAACTGAAGCAGTGGGATGCGGACAGCTTTCAGAAGATTATCACGTTGCCCGGCCATTTGGGAGAAGCGCACGCGCTTGCGATTAGCCCCAATGGGAAGTACGTCGTTAGTTGCGGTTCAGACCGTACTCTACGGCTGTTCCATCGCACCGAGGAACCGCTTGTTCTGCAGGACGTGCAAGAGGAAGAGCGAGAGGAGCTAGAGAATGCTACGCTGGCCACAGGAGAAGAATCGACCGTA-CCGGTTTGCCTGGTCTGAAACTGCCGTCCAAGAAAACAATCGGATCGGAGAAGGGAGCGGAAAACATTCTCGAGTGTCTCGAGGGTAAGCAAACAGGTACGAAGAGGAAAGGCGGAAAAGGACCGGTTGCCT-CGCTAATG-TTGCTTACTCGG-CA-CAACACGGACGANTTTCCCCTGGCTTTGACCGGTACCTGGTCGGCCATTCCGGGGCCAAGNTGATCCTTCNGANGAAGTTCGGCNCCCNGGGTAACTTGNCCGTTAAATNGCCGGTGTTTTGACACCTGGTCCNAAAAGGGGTTCCGAAAGTGTCCACCGAAACGGAAGGATCNAACGGAGC]
[+] EMBL BX467446 [CAGAATCNCGCACGAGGTGAAGTGTGAGGATTTCACAGAACTGGCAAGTACATAGCGGTCGCCCTGCTTGACACGACGGTGAAAATATTCTTCATGGACAGTCTCAAGTTTTATCTTTCTCTGTACGGCCATAAGCTGCCCGTAGTAACGATGGACATCTCGTACGATTCGACTCTCATCATAACGGGGTCGGCCGATCGTACGATAAAGATTTGGGGCATGGACTTTGGCGATTGCCATCGCTCGCTGCTTGCGCATGATAACACCGTGACGGCGGTTCAGTTCATCCCGAACACGCACATGTTCTTCTCTTGCGCCAAGGACGGCAAACTGAAGCAGTGGGATGCGGACAGCTTTCAGAAGATTATCACGTTGCCCGGCCATTTGGGAGAAGCGCACGCGCTTGCGATTAGCCCCAATGGGAAGTACGTCGTTAGTTGCGGTTCAGACCGTACTCTACGGCTGTTCCATCGCACCGAGGAACCGCTTGTTCTGCAGGACGTGCAAGAGGAAGAGCGAGAGGAGCTAGAGAATGCTACGCTGGCCACAGGAGAAGAATCGACCGTA CCGGTTTGCCTGGTCTGAAACTGCCGTCCAAGAAAACAATCGGATCGGAGAAGGGAGCGGAAAACATTCTCGAGTGTCTCGAGGGTAAGCAAACAGGTACGAAGAGGAAAGGCGGAAAAGGACCGGTTGCCT CGCTAATG TTGCTTACTCGG CA CAACACGGACGANTTTCCCCTGGCTTTGACCGGTACCTGGTCGGCCATTCCGGGGCCAAGNTGATCCTTCNGANGAAGTTCGGCNCCCNGGGTAACTTGNCCGTTAAATNGCCGGTGTTTTGACACCTGGTCCNAAAAGGGGTTCCGAAAGTGT ]
[+] EMBL BX622005 [ CTGCTTGACACGACGGTGAAAATATTCTTCATGGACAGTCTCAAGTTTTATCTTTCTCTGTACGGCCATAAGCTGCCCGTAGTAACGATGGACATCTCGTACGATTCGACTCTCATCATAACGGGGTCGGCCGATCGTACGATAAAGATTTGGGGCATGGACTTTGGCGATTGCCATCGCTCGCTGCTTGCGCATGATAACACCGTGACGGCGGTTCAGTTCATCCCGAACACGCACATGTTCTTCTCTTGCGCCAAGGACGGCAAACTGAAGCAGTGGGATGCGGACAGCTTTCAGAAGATTATCACGTTGCCCGGCCATTTGGGAGAAGCGCACGCGCTTGCGATTAGCCCCAATGGGAAGTACGTCGTTAGTTGCGGTTCAGACCGTACTCTACGGCTGTTCCATCGCACCGAGGAACCGCTTGTTCTGCAGGACGTGCAAGAGGAAGAGCGAGAGGAGCTAGAGAATGCTACGCTGGCCACAGGAGAAGAATCGACCGTACCCGGTTTGCCTGGTCTGAAACTGCCGTCCAAGAAAACAATCGGATCGGAGAAGGGAGCGGAAAACATTCTCGAGTGTCTCGA GGTAAGCAAACA GTACGAAGAGG AAGGCGGAAAAGTACC GCTGCCTCCGCTAATGTTTGCTTACTCGGCCACCAACACGGACGA TTT CCT GC TGACC GTA CT GTCGCGCATTC GGG CAAG TGATC TC GAAG AG TC GCTCC TGCT AC TG CCGTTTAAT G CGGTG TGTGA A CTGCTC GAAA GGGTTCCGAAGCTGACCACCGAAACGGAAGGATCNAACGGAGC]
consensusID : consensus_4504#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 516 fasta sequence
[ACGACCGTAAAGTTTTGGTCCTTTGAACTGATCGCTGCAAGCGGTGGCCAGGACGCGGCCAAGGTGCTCTCGCTGTTGCACAAAAACACTCTCAAGCTGGAGGAAACGGTGTTGAGTGTGAGGATTTCCCAGAATGGCAAGTACATAGCGGTCGCCCTGCTTGATACGACGGTGAAAATATTCTTCATGGACAGTCTCAAGNTTTATCTTTCTCTGTACGGNCATAAGCTGCCCGTAGTAACGATGGACATCTCGTACGATTCGACTCTCATCATAACGGGGTCGGCCGATCGTACGATAAAGATTTGGGGCATGGACTTTGGCGATTGCCATCGCTCGCTGCTTGCGCATGATAACACCGTGACGGCGGTTCAGTTCATCCCGAACACGCACATGTTCTTCTCTTGCGCCAAGGACGGCAAACTGAAGCAGTGGGATGCGGACAGCTTTCAGAAGATTATCACGTTGCCCGGCCATTTGGGAGAAGCGCACGCGCTTGCGATTAGCCCCAATGGG]
[+] EMBL BX626523 [ACGACCGTAAAGTTTTGGTCCTTTGAACTGATCGCTGCAAGCGGTGGCCAGGACGCGGCCAAGGTGCTCTCGCTGTTGCACAAAAACACTCTCAAGCTGGAGGAAACGGTGTTGAGTGTGAGGATTTCCCAGAATGGCAAGTACATAGCGGTCGCCCTGCTTGATACGACGGTGAAAATATTCTTCATGGACAGTCTCAAGNTTTATCTTTCTCTGTACGGNCATAAGCTGCCCGTAGTAACGATGGACATCTCGTACGATTCGACTCTCATCATAACGGGGTCGGCCGATCGTACGATAAAGATTTGGGGCATGGACTTTGGCGATTGCCATCGCTCGCTGCTTGCGCATGATAACACCGTGACGGCGGTTCAGTTCATCCCGAACACGCACATGTTCTTCTCTTGCGCCAAGGACGGCAAACTGAAGCAGTGGGATGCGGACAGCTTTCAGAAGATTATCACGTTGCCCGGCCATTTGGGAGAAGCGCACGCGCTTGCGATTAGCCCCAATGGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4504#0 ------------------------------------------------------------
consensus_4504#1 ACGACCGTAAAGTTTTGGTCCTTTGAACTGATCGCTGCAAGCGGTGGCCAGGACGCGGCC 60
consensus_4504#0 --------------------------------CAGAATCNCGCACGAGGTG--AAGTGTG 26
consensus_4504#1 AAGGTGCTCTCGCTGTTGCACAAAAACACTCTCAAGCTGGAGGAAACGGTGTTGAGTGTG 120
** * * * **** ******
consensus_4504#0 AGGATTTCACAGAACTGGCAAGTACATAGCGGTCGCCCTGCTTGACACGACGGTGAAAAT 86
consensus_4504#1 AGGATTTCCCAGAA-TGGCAAGTACATAGCGGTCGCCCTGCTTGATACGACGGTGAAAAT 179
******** ***** ****************************** **************
consensus_4504#0 ATTCTTCATGGACAGTCTCAAGTTTTATCTTTCTCTGTACGGCCATAAGCTGCCCGTAGT 146
consensus_4504#1 ATTCTTCATGGACAGTCTCAAGNTTTATCTTTCTCTGTACGGNCATAAGCTGCCCGTAGT 239
********************** ******************* *****************
consensus_4504#0 AACGATGGACATCTCGTACGATTCGACTCTCATCATAACGGGGTCGGCCGATCGTACGAT 206
consensus_4504#1 AACGATGGACATCTCGTACGATTCGACTCTCATCATAACGGGGTCGGCCGATCGTACGAT 299
************************************************************
consensus_4504#0 AAAGATTTGGGGCATGGACTTTGGCGATTGCCATCGCTCGCTGCTTGCGCATGATAACAC 266
consensus_4504#1 AAAGATTTGGGGCATGGACTTTGGCGATTGCCATCGCTCGCTGCTTGCGCATGATAACAC 359
************************************************************
consensus_4504#0 CGTGACGGCGGTTCAGTTCATCCCGAACACGCACATGTTCTTCTCTTGCGCCAAGGACGG 326
consensus_4504#1 CGTGACGGCGGTTCAGTTCATCCCGAACACGCACATGTTCTTCTCTTGCGCCAAGGACGG 419
************************************************************
consensus_4504#0 CAAACTGAAGCAGTGGGATGCGGACAGCTTTCAGAAGATTATCACGTTGCCCGGCCATTT 386
consensus_4504#1 CAAACTGAAGCAGTGGGATGCGGACAGCTTTCAGAAGATTATCACGTTGCCCGGCCATTT 479
************************************************************
consensus_4504#0 GGGAGAAGCGCACGCGCTTGCGATTAGCCCCAATGGGAAGTACGTCGTTAGTTGCGGTTC 446
consensus_4504#1 GGGAGAAGCGCACGCGCTTGCGATTAGCCCCAATGGG----------------------- 516
*************************************
consensus_4504#0 AGACCGTACTCTACGGCTGTTCCATCGCACCGAGGAACCGCTTGTTCTGCAGGACGTGCA 506
consensus_4504#1 ------------------------------------------------------------
consensus_4504#0 AGAGGAAGAGCGAGAGGAGCTAGAGAATGCTACGCTGGCCACAGGAGAAGAATCGACCGT 566
consensus_4504#1 ------------------------------------------------------------
consensus_4504#0 ACCGGTTTGCCTGGTCTGAAACTGCCGTCCAAGAAAACAATCGGATCGGAGAAGGGAGCG 626
consensus_4504#1 ------------------------------------------------------------
consensus_4504#0 GAAAACATTCTCGAGTGTCTCGAGGGTAAGCAAACAGGTACGAAGAGGAAAGGCGGAAAA 686
consensus_4504#1 ------------------------------------------------------------
consensus_4504#0 GGACCGGTTGCCTCGCTAATGTTGCTTACTCGGCACAACACGGACGANTTTCCCCTGGCT 746
consensus_4504#1 ------------------------------------------------------------
consensus_4504#0 TTGACCGGTACCTGGTCGGCCATTCCGGGGCCAAGNTGATCCTTCNGANGAAGTTCGGCN 806
consensus_4504#1 ------------------------------------------------------------
consensus_4504#0 CCCNGGGTAACTTGNCCGTTAAATNGCCGGTGTTTTGACACCTGGTCCNAAAAGGGGTTC 866
consensus_4504#1 ------------------------------------------------------------
consensus_4504#0 CGAAAGTGTCCACCGAAACGGAAGGATCNAACGGAGC 903
consensus_4504#1 -------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||