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Anopheles gambiae
cluster # 4540 cluster # 4540       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4540#0 length = 1002 sequences # 3  

consensusID : consensus_4540#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1002
fasta sequence
                              [CTAAACGCGCCTTCAACACGTCTACAGCACTTTATTTCCATTTCTTCCTTAAATACAGTGGCGATAGTGAGATTGTAAAATGCTTATCGATCTAAAATGTCAACAGTA--TTTTTTTGTCTCCGAATTAAGCCGCACCCGCTCTGAAAAGAACCGCACTCCTCCTATCACAGACTAGTGGTTTCGCTTATCTAAAAATTCCCCCGGTGTTTCCCAGGTGCCCCCCGCTGTCGAGACCGTTACGCCTTCGAGGCCTGCTTGTCTACTTCGGACGCATTTGCCTCCTTGCCGCCGCGGAAGTAATCCTCAATGTCCTGCAGCGTTCGGCCCTTCGTTTCCGGCAGGAAGAAGTACACGAACACGATGCCCAGCAGGGCGACCAGTCCGAAGAACAGGAACACATTCTCATTACCGATCGCACTGACCATCGTCGGGTAGCTCTTCAGTATGATGAACGACATGGTGTAGCCGAAGAAGATCGTCAGCCCGGACGCGAAGCCACGGATCTTGGTCGGATAAACTTCAGCGTTCATCGAGAAGGGTAGCGTGAGGAAGCCAAGCGTAGCGGTAAAGATAAACGCCACCAGCAGTGCGGTCGGGATCCAGTTGTACTGCGTGTCGGCCACCGGGAACACGGCACACGCCGCCAGCCCAAACATACAGCACGCCATACCGAACCCGGAGAACAGGGCCGGCGGACGGCGACCGAACTTGTCCGAAATGAACGACATCAGGATGGTGGTGACGACACGCGTCACCCTTACCAGCACCGCGCTCAGAAACGGATCGATTGCAACCCCGGCCTCCACGGAGAAGCTGGCCGCGTACACGATAATGACAAAGATGCCGGAGAATTGTTGAAACAGGAAGAAGATGCACATGATCGAGAGCGGCTTGTACACTTCCGGCTTCTTCAGCTGCACCAGCTTGGAGGACTTTTTCGTCTCGGACGACCGGAACCGGGCCACATTCTCTTCGAGCGACTTGATCCGGACGCGTGGGCGG]

[+] EMBL CNS09OQE             [CTAAACGCGCCTTCAACACGTCTACAGCACTTTATTTCCATTTCTTCCTTAAATACAGTGGCGATAGTGAGATTGTAAAATGCTTATCGATCTAAAATGTCAACAGTA  TTTTTTTGTCTCCGAATTAAGCCGCACCCGCTCTGAAAAGAACCGCACTCCTCCTATCACAGACTAGTGGTTTCGCTTATCTAAAAATTCCCCCGGTGTTTCCCAGGTGCCCCCCGCTGTCGAGACCGTTACGCCTTCGAGGCCTGCTTGTCTACTTCGGACGCATTTGCCTCCTTGCCGCCGCGGAAGTAATCCTCAATGTCCTGCAGCGTTCGGCCCTTCGTTTCCGGCAGGAAGAAGTACACGAACACGATGCCCAGCAGGGCGACCAGTCCGAAGAACAGGAACACATTCTCATTACCGATCGCACTGACCATCGTCGGGTAGCTCTTCAGTATGATGAACGACATGGTGTAGCCGAAGAAGATCGTCAGCCCGGACGCGAAG CACGGATCTTGGTCGGATAAACTTCAGCGTTCATCGAGAAGGGTAGCGTGAGGAAGCCAAGCGTAGC TTAAAGATAAACGCCACCAGCAGTGCGGTCGGGATCCAGTTGTACTGCGTGTCGGCCACCGGGAACACGGCACACGCCGCCAGCCCAAACATACAGCACGCCATACCGAACCCGGAGAACAGGGCCGGCGGACGGCGACCGAACTTGTCCGAAATGAACGACATCAGGATGGTGGTGACGACACGCGTCACCCTTACCAGCACCGCGCTCAGAAACGGATCGATTGCAACCCCGGCCTCCACGGAGAAGCTGGCCGCGTACACGATAATGACAAAGATGCCGGAGAATTGTTGAAACAGGAAGAAGATGCACATGATCGAGAGCGGCTTGTACACTTCCGGCTTCTTCAGCTGCACCAGCTTGGAGGACTTTTTCGTCTCGGACGACCGGAACCGGGCC                                       ]
[-] EMBL BX627824             [      aCGTCTTCAACACGTCTACAACACTTTATTTTCATTTCTCCCTTAAATACAGTGGCGTTAGTGAGATTGTAAAATGCTTATCGATCTAAAATGTCAACAGTATGTTTTTTTGTCTCCGAATTAAGCCGCACCCGCTCCGAAAAGAACCGCACTCCTCCTATCACAGACTAGTGGTTTCGCTTATCT AAAACTCCCTCGGTGTTTCCCCGGTGCCCCCAGGTGCCGGGACCGTTACGCCTTCGAGGCCTGCTTGTCTACTTCAGACGCATTTGCCTCCTTGCCGCCACGGAAGTAATCCTCAATGTCCTGCAGCGTTCGGCCCTTCGTTTCGGGCAGGAAGAAGTACACGAACACGATGCCCAGCAGGGCGACCAGCCCGAAGAACAGGAACACATTCTCATTACCGATCGCACTGACCATCGTCGGGTAGCTCTTCAGTATGATGAACGACATGGTGTAGCCGAAGAAGATCGTCAGCCCGGACGCGAAGCCACGGATCTTGGTCGGATAAACTTCAGCGTTCATCGAGAAGGGTAGCGTGAGGAAGCCAAGCGTAGCGGTAAAGATAAACGCCACCAGCAGTGCGGTCGGGATCCAGTTGTACTGCGTGTCGGCCACCGGGAACACGGCACACGCCGCCAGCCCAAACATACAGCACGCCATACCGAACCCGGAGAACAG                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL BM576312             [                                                                                                                                                                                                                                                                                                                                                    CAGGAAGAAGTACACGAACACGATGCCCAACAGGGCGACCAGTCCGAAGAACAGGAACACATTCTCATTACCGATCGCACTGACCATCGTCGGGTAGCTCTTCAGTATGATGAACGACATGGTGTAGCCGAAGAAGATCGTCAGCCCGGACGCGAAGCCACGGATCTTGGTCGGATAAACTTCAGCGTTCATCGAGAAGGGTAGCGTGAGGAAGCCAAGCGTAGCGGTAAAGATAAACGCCACCAGCAGTGCGGTCGGGATCCAGTTGTACTGCGTGTCGGCCACCGGGAACACGGCACACGCCGCCAGCCCAAACATACAGCACGCCATGCCGAACCCGGAGAACAGGGCCGGCGGTCGGCGACCAAACTTGTCCGAAATGAACGACATCAGGATGGTGGTGACGACACGCGTCAGCCCAACCAGCACCGCGCTCAGGAACGGATCGATCGCAACCCCTGCCTCCACGGAGAAGCTGGCCGCGTACACGATAATAACAAAGATGCCGGAGAATTGTTGAAACAGGAAGAAGATGCACATGATCGAGAGCGGTTTGTACACTTCCGGCTTCTTCAGCTGCACCAGCTTGGAGGACTTTTTCGTCTCGGACGACCGGAACCGGGCCACATTCTCTTCGAGCGACTTGATCCGGACGCGTGGGCGG]


>consensus_4540#0 CTAAACGCGCCTTCAACACGTCTACAGCACTTTATTTCCATTTCTTCCTTAAATACAGTG GCGATAGTGAGATTGTAAAATGCTTATCGATCTAAAATGTCAACAGTATTTTTTTGTCTC CGAATTAAGCCGCACCCGCTCTGAAAAGAACCGCACTCCTCCTATCACAGACTAGTGGTT TCGCTTATCTAAAAATTCCCCCGGTGTTTCCCAGGTGCCCCCCGCTGTCGAGACCGTTAC GCCTTCGAGGCCTGCTTGTCTACTTCGGACGCATTTGCCTCCTTGCCGCCGCGGAAGTAA TCCTCAATGTCCTGCAGCGTTCGGCCCTTCGTTTCCGGCAGGAAGAAGTACACGAACACG ATGCCCAGCAGGGCGACCAGTCCGAAGAACAGGAACACATTCTCATTACCGATCGCACTG ACCATCGTCGGGTAGCTCTTCAGTATGATGAACGACATGGTGTAGCCGAAGAAGATCGTC AGCCCGGACGCGAAGCCACGGATCTTGGTCGGATAAACTTCAGCGTTCATCGAGAAGGGT AGCGTGAGGAAGCCAAGCGTAGCGGTAAAGATAAACGCCACCAGCAGTGCGGTCGGGATC CAGTTGTACTGCGTGTCGGCCACCGGGAACACGGCACACGCCGCCAGCCCAAACATACAG CACGCCATACCGAACCCGGAGAACAGGGCCGGCGGACGGCGACCGAACTTGTCCGAAATG AACGACATCAGGATGGTGGTGACGACACGCGTCACCCTTACCAGCACCGCGCTCAGAAAC GGATCGATTGCAACCCCGGCCTCCACGGAGAAGCTGGCCGCGTACACGATAATGACAAAG ATGCCGGAGAATTGTTGAAACAGGAAGAAGATGCACATGATCGAGAGCGGCTTGTACACT TCCGGCTTCTTCAGCTGCACCAGCTTGGAGGACTTTTTCGTCTCGGACGACCGGAACCGG GCCACATTCTCTTCGAGCGACTTGATCCGGACGCGTGGGCGG



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)