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Anopheles gambiae
cluster # 4789 cluster # 4789       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4789#0 length = 1540 sequences # 3  

consensusID : consensus_4789#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1540
fasta sequence
                              [TTAGTGAGTGAGGAATGTACTCGACCGTTAGCTACTTGAACCAGTTTCTGCCTCCGCATCTTCGCATACGGTACATCGATTTCGATATGGCACGCAAAAGCCGCGGCACGGGGAATTTCATGGAGAAGCTGGCCAAGATCGCGGAAACGGTGATCCAGCAGACGGGAATGTTTTATTCGGACGACGAGCGAAGCAAAAGCAGACTGGCATAGTGCGGGTCAACTGCGTCGACTGTCTGGATCGCACCAATACGGCACAGTTTGCGATTGGCAAGTGCGTCCTAGCCCATCAGCTGTACGATTTGGGGTTCTTGAAGGAGCGCAAACTAGAGTTCGAGTCGGACTGTATCACGATGCTCGAGAATCTGTACTAAGACCATGGTGATACGCTGGCCTTGCAGTACGGGGGGTCGCAGCTGGTTCACCGGATCAAAACATACCGCAAAACGGCCGTATGGGCGTCGCAGGGTAATGATATCATGCAAACGCTCGGGGGCTATTACAGCAACACTTTCAGCGATACGGAGAAACAGCACAGCATCAATCTGTTCCTGGGTTACTACATTCCTTCGAAGGCGGAGGTGAACAAAACGCTTCACATTTGGGATCTGGAAACCGATTTCTACATACATAACTCTCGTTTCGATGAGATACGGCAGATATCGTCCATTCCGCTCACCCAGTGGGTCAGTCCGTTTGTGATGAACTGCCTCCCCGCCGCAGTGAGCGACGAGAATCGTGTCGTGAAGGAGCTGATCAAGATACACTCGAATGATGCGGAAATTATAGACTACTACTCAAATTTCCACTACGACTATAAGCTGACCTCCTTCGAAGAGCATATCGACTATCAGCTGAGCCATTTGTCGCGAAACCTTGCGCCTGCCTTCCGGTCCCACTTCAGCCCCTTCGAGCCGATCCGCCGAC-AG--CAAAGCACGGCACTGAAGAATCCTTTACTGACGGGCCAATCGTCCACTAGCTCGGCCAACAGTTCGTCTTCCGATCGATCGGACGATGAGTCAGAATCGGACGAGGAGGAAAAAAGCCCCCACAACCCCAACACAGCACCGAGCAGCAGCACCAACAGTAGCCGTGCAGAGGATCCCGTCACGCTCAGTTCCATGTTTCCGATGACGAACGACATATACGGGTTTGAAAACCGAATGCCAAAAAAGGCGGACATGCTAAAGTACGAAAAATATGCCGAAATCAACCGCATCTGTAACTCAACCGGAGAGCCGGCAAGACCGTCCTCTCCGCATCAGTACAACCGCCATGCCCAGATGAACGAGAGTGGCGGACTATCGATATACAACAACGAAATCATCATCGCTAGCGTGACGCCGGAGAAGGACATTCAGAACGATATTGCGATTCCGACCGTAAGTGATGAGAGTATAGCAATCTACGAGAAGTACTGCATGCTGAAGCACACCATCATGTACGACTTTCGCTGCGACCCAAAGATACTGGAGTACGTTAATATGTTTGCATAAGTAACGGCGAGAAGCCAATAAACCAAACGCAATGCCAATAGACCC]

[+] EMBL CNS08OER             [TTAGTGAGTGAGGAATGTACTCGACCGTTAGCTACTTGAACCAGTTTCTGCCTCCGCATCTTCGCATACGGTACATCGATTTCGATATGGCACGCAAAAGCCGCGGCACGGGGAATTTCATGGAGAAGCTGGCCAAGATCGCGGAAACGGTGATCCAGCAGACGGGAATGTTTTATTCGGACGACGAGCGAAGCAAAAGCAGACTGGCATAGTGCGGGTCAACTGCGTCGACTGTCTGGATCGCACCAATACGGCACAGTTTGCGATTGGCAAGTGCGTCCTAGCCCATCAGCTGTACGATTTGGGGTTCTTGAAGGAGCGCAAACTAGAGTTCGAGTCGGACTGTATCACGATGCTCGAGAATCTGTACTAAGACCATGGTGATACGCTGGCCTTGCAGTACGGGGGGTCGCAGCTGGTTCACCGGATCAAAACATACCGCAAAACGGCCGTATGGGCGTCGCAGGGTAATGATATCATGCAAACGCTCGGGGGCTATTACAGCAACACTTTCAGCGATACGGAGAAACAGCACAGCATCAATCTGTTCCTGGGTTACTACATTCCTTCGAAGGCGGAGGTGAACAAAACGCTTCACATTTGGGATCTGGAAACCGATTTCTACATACATAACTCTCGTTTCGATGAGATACGGCAGATATCGTCCATTCCGCTCACCCAGTGGGTCAGTCCGTTTGTGATGAACTGCCTCCCCGCCGCAGTGAGCGACGAGAATCGTGTCGTGAAGGAGCTGATCAAGATACACTCGAATGATGCGGAAATTATAGACTACTACTCAAATTTCCACTACGACTATAAGCTGACCTCCTTCGAAGAGCATATCGACTATCAGCTGAGCCATTTGTCGCGAAACCTTGCGCCTGCCTTCCGGTCCCACTTCAGCCCCTTCGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CNS08OES             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATTACTCTCGTTTCGATGAGATACGGCAGATATCGTCCATTCCGCTCACCCAGTGGGTCAGTCCGTTTGTGATGAACTGCCTCCCCGCCGCAGTGAGCGACGAGAATCGTGTCGTGAAGGAGCTGATCAAGATACACTCGAATGATGCGGAAATTATAGACTACTACTCAAATTTCCACTACGACTATAAGCTGACCTCCTTCGAAGAGCATATCGACTATCAGCTGAGCCATTTGTCGCGAAACCTTGCGCCTGCCTTCCGGTCCCACTTCAGCCCCTTCGAGCCGATCCGCCGAC AG  CAAAGCACGGCACTGAAGAATCCTTTACTGACGGGCCAATCGTCCACTAGCTCGGCCAACAGTTCGTCTTCCGATCGATCGGACGATGAGTCAGAATCGGACGAGGAGGAAAAAAGCCCCCACAACCCCAACACAGCACCGAGCAGCAGCACCAACAGTAGCCGTGCAGAGGATCCCGTCACGCTCAGTTCCATGTTTCCGATGACGAACGACATATACGGGTTTGAAAACCGAATGCCAAAAAAGGCGGACATGCTAAAGTACGAAAAATATGCCGAAATCAACCGCATCTGTAACTCAACCGGAGAGCCGGCAAGACCGTCCTCTCCGCATCAGTACAACCGCCATGCCCAGATGAACGAGAGTGGCGGACTATCGATATACAACAACGAAATCATCATCGCTAGCGTGACGCCGGAGAAGGACATTCAGAACGATATTGCGATTCCGACCGTAAGTGATGAGAGTATAGCAATCTACGAGAAGTACTGCATGCTGAAGCACACCATCATGTACGACTTTCGCTGCGACCCAAAGATACTGGAGTACGTTAATATGTTTGCATAAGTAACGGCGAGAAGCCAATAAACCAAACGCAATGCCAATAGACCC]
[+] EMBL BM583779             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCGCCCACGCGTCCGAAGCACGGCACTGAAGAATCCTTCACTGACGGGCCAATCGTCCACTAGCTCGGCCAACAGTTCGTCTTCCGATCGATCGGACGATGAGTCAGAATCGGACGAGGAGGAAAAAAGCAGCAACAACCGCAACACAGCACCGAGCAGCAGCACCAACAGTAGCCGTGCAGAGGATCCCGTCACGCTCAGTTCCATGTTTCCGATGACGAACGACATATACGGGTTTGAAATACGAATGCCAAAAAAGGCGGACATGCTAAAGTACGAAAAGTATGCCGAAATCAACCGCATCTGTAACTCAACCGGAGAGCCGGCAAGACCGTCCTCTCCGCATCAGTACAACCGCCATGCCCAGATGAACGAGAATGGCGGACTATCGATATACAACAACGAAATCATCATCGCTAGCGTGACGCCGGAGAAGGACATTCAGAACGATATTGCGATTCCGACCGTAAGTGATGAGAGTATAGCAATCTATGAGAAGTACTGCATGCTGAAGCACACCATCATGTACGACTTTCGCTGCGACCCAAAG                                                                           ]


>consensus_4789#0 TTAGTGAGTGAGGAATGTACTCGACCGTTAGCTACTTGAACCAGTTTCTGCCTCCGCATC TTCGCATACGGTACATCGATTTCGATATGGCACGCAAAAGCCGCGGCACGGGGAATTTCA TGGAGAAGCTGGCCAAGATCGCGGAAACGGTGATCCAGCAGACGGGAATGTTTTATTCGG ACGACGAGCGAAGCAAAAGCAGACTGGCATAGTGCGGGTCAACTGCGTCGACTGTCTGGA TCGCACCAATACGGCACAGTTTGCGATTGGCAAGTGCGTCCTAGCCCATCAGCTGTACGA TTTGGGGTTCTTGAAGGAGCGCAAACTAGAGTTCGAGTCGGACTGTATCACGATGCTCGA GAATCTGTACTAAGACCATGGTGATACGCTGGCCTTGCAGTACGGGGGGTCGCAGCTGGT TCACCGGATCAAAACATACCGCAAAACGGCCGTATGGGCGTCGCAGGGTAATGATATCAT GCAAACGCTCGGGGGCTATTACAGCAACACTTTCAGCGATACGGAGAAACAGCACAGCAT CAATCTGTTCCTGGGTTACTACATTCCTTCGAAGGCGGAGGTGAACAAAACGCTTCACAT TTGGGATCTGGAAACCGATTTCTACATACATAACTCTCGTTTCGATGAGATACGGCAGAT ATCGTCCATTCCGCTCACCCAGTGGGTCAGTCCGTTTGTGATGAACTGCCTCCCCGCCGC AGTGAGCGACGAGAATCGTGTCGTGAAGGAGCTGATCAAGATACACTCGAATGATGCGGA AATTATAGACTACTACTCAAATTTCCACTACGACTATAAGCTGACCTCCTTCGAAGAGCA TATCGACTATCAGCTGAGCCATTTGTCGCGAAACCTTGCGCCTGCCTTCCGGTCCCACTT CAGCCCCTTCGAGCCGATCCGCCGACAGCAAAGCACGGCACTGAAGAATCCTTTACTGAC GGGCCAATCGTCCACTAGCTCGGCCAACAGTTCGTCTTCCGATCGATCGGACGATGAGTC AGAATCGGACGAGGAGGAAAAAAGCCCCCACAACCCCAACACAGCACCGAGCAGCAGCAC CAACAGTAGCCGTGCAGAGGATCCCGTCACGCTCAGTTCCATGTTTCCGATGACGAACGA CATATACGGGTTTGAAAACCGAATGCCAAAAAAGGCGGACATGCTAAAGTACGAAAAATA TGCCGAAATCAACCGCATCTGTAACTCAACCGGAGAGCCGGCAAGACCGTCCTCTCCGCA TCAGTACAACCGCCATGCCCAGATGAACGAGAGTGGCGGACTATCGATATACAACAACGA AATCATCATCGCTAGCGTGACGCCGGAGAAGGACATTCAGAACGATATTGCGATTCCGAC CGTAAGTGATGAGAGTATAGCAATCTACGAGAAGTACTGCATGCTGAAGCACACCATCAT GTACGACTTTCGCTGCGACCCAAAGATACTGGAGTACGTTAATATGTTTGCATAAGTAAC GGCGAGAAGCCAATAAACCAAACGCAATGCCAATAGACCC



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)