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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4862#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1007 fasta sequence
[CCGCCCACGCGTCCGAGCTCGCCTACTTGATGGTGGTGGTGGTGGTCTGCCTGTTTGGCATTGGCTGCATCGCCGCGACCGGACTACCGGGATCGGCTGCCAAGAGCGCAGGGGGCCACCAGACGGGCGACGTGTTCACCAGCTCGTTTCTGGTGCGGTTTAAGCGCAGCCTGGACAAGCAGCTGGTACACGAGATTGCCTCGCGGAATGGATTCCAAAATTTGGGCGAGCTTCCTGGCAGCAATGGTAAGGAGTTTCACTTCAAGCACACCACCCTGCCGTTGGTACGCACCAGGCGAAGCATCTCCCATACGCGTGTGCTTAAAAAGGAACCACTGATACACACCGCAATACAGCAGTCCGGATTTAAGCGCGTCAAGCGCGGCTTCCGCCATGCCGTCCCGCTGAACTACATCCCGGACAAGGCGCCCGGGTACGGTGGCGAGAATGTGCCGACCGATCCGTACTTCCCGTTCCAGTGGTACTTGAAAAACACGGGACAAAACGGCGGCAAGGCGAAGCTCGACCTCAACGTGCTGGCTGCGTGGGACCAAGGCATTACCGGGAAAAACATTACCACCGCCATCATGGGACGACGGCGTTGATTACATGCACGCGGATCTGAAGTTTAATTATAATGCCGAAGCGAGTTACGATTTTAGCAGCAACGATCCGTTCCCTTACCCACGGTACACGGACGATTGGTTCAATAGCCATGGCACACGGTGCGCCGGTGAGGTAGCCGCCGCCCGGGACAACGGCATCTGCGGGGTGGGCGTTGCGTACGATTCGAAGATCGCCGGCATCCGAATGCTGGACCAGCCGTACATGACCGATCTGATCGAGGCGAACTCGATGGGGCACGAGCCGCACAAGATCCACATCTACAGCGCGTCCTGGGGCCCGACCGACGACGGCAAAACGGTGGACGGCCCACGGAACGCGACGATGCGCGCGATCGTACAGGGTGTCAACGAGGGCCGGAACGGGCTGGGCAACATCTACGT]
[+] EMBL BM656191 [CCGCCCACGCGTCCGAGCTCGCCTACTTGATGGTGGTGGTGGTGGTCTGCCTGTTTGGCATTGGCTGCATCGCCGCGACCGGACTACCGGGATCGGCTGCCAAGAGCGCAGGGGGCCACCAGACGGGCGACGTGTTCACCAGCTCGTTTCTGGTGCGGTTTAAGCGCAGCCTGGACAAGCAGCTGGTACACGAGATTGCCTCGCGGAATGGATTCCAAAATTTGGGCGAGCTTCCTGGCAGCAATGGTAAGGAGTTTCACTTCAAGCACACCACCCTGCCGTTGGTACGCACCAGGCGAAGCATCTCCCATACGCGTGTGCTTAAAAAGGAACCACTGATACACACCGCAATACAGCAGTCCGGATTTAAGCGCGTCAAGCGCGGCTTCCGCCATGCCGTCCCGCTGAACTACATCCCGGACAAGGCGCCCGGGTACGGTGGCGAGAATGTGCCGACCGATCCGTACTTCCCGTTCCAGTGGTACTTGAAAAACACGGGACAAAACGGCGGCAAGGCGAAGCTCGACCTCAACGTGCTGGCTGCGTGGGACCAAGGCATTACCGGGAAAAACATTACCACCGCCATCATGGGACGACGGCGTTGATTACATGCACGCGGATCTGAAGTTTAATTATAATGCCGAAGCGAGTTACGATTTTAGCAGCAACGATCCGTTCC ]
[+] EMBL BM633120 [ ccgTGGTACACACCGCAATACAGCAGTCCGGATTTAAGCGCGTCAAGCGCGGCTTCCGCCATGCCGTCCCGCTGAACTACATCCCGGACAAGGCGCCCGGGTACGGTGGCGAGAATGTGCCTACCGATCCGTACTTCCCGTTCCAGTGGTACTTGAAAAACACGGGACAAAACGGCGGCAAGGCGAAGCTCGACCTCAACGTGCTGGCTGCGTGGGACCAAGGCATTACCGGGAAAAACATTACCACCGCCATCAT GGACGACGGCGTTGATTACATGCACGCGGATCTGAAGTTTAATTATAATGCCGAAGCGAGTTACGATTTTAGCAGCAACGATCCGTTCCCTTACCCACGGTACACGGACGATTGGTTCAATAGCCATGGCACACGGTGCGCCGGTGAGGTAGCCGCCGCCCGGGACAACGGCATCTGCGGGGTGGGCGTTGCGTACGATTCGAAGATCGCCGGCATCCGAATGCTGGACCAGCCGTACATGACCGATCTGATCGAGGCGAACTCGATGGG ]
[+] EMBL BX610558 [ GGTTCAATAGCCATGGCACACGGTGCGCCGGTGAGGTAGCCGCCGCCCGGGACAACGGCATCTGCGGGGTGGGCGTTGCGTACGATTCGAAGATCGCCGGCATCCGAATGCTGGACCAGCCGTACATGACCGATCTGATCGAGGCGAACTCGATGGGGCACGAGCCGCACAAGATCCACATCTACAGCGCGTCCTGGGGCCCGACCGACGACGGCAAAACGGTGGACGGCCCACGGAACGCGACGATGCGCGCGATCGTACAGGGTGTCAACGAGGGCCGGAACGGGCTGGGCAACATCTACGT]
consensusID : consensus_4862#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 532 fasta sequence
[CCGGAAAGGTTGGCCGCGCACTTCCGTCGCTTATCGGGCCCGTGTCTGTGCCTGTATGTGTGTGTGTGGATAAGTGAAAGCACATTTGGAAAATTTTAAAAGCACAGCAGGGAAAACAGTTCTCCACCAGCTCCGAACGCAATCGGAGGCAATGGCGGCTTAACGGAGGTTGTAGTGCTGCTGGTGCTGGTGCTGATTGTACGGGAAGTGACGCATATCGCTCGGAGAGCGCCTGCCAAATGGGGCCTCGGTTTAGTGCAAATCAGTAGCTGTGCGTGTGCTTTGTAACGGGAAGCAGAAGAAGCAGGAGCGGCCCTTCCGAACAAACCTGCACCGGAAGCACGGAGACACACAAAAACCGAAAGGGGGACACGCGCGAGCAGCCGAGGATACGAGTTTAAAGGGCAAAAGTTACAGCATCAACGCCAACCATGTTCGTGAAGAAGCTCGCCTACTTGATGGTGGGTGGTGGCGGTCTGCCTGTTTGGCATTGGCTGCATCGCGGCGACCGGACTGCCGGGATCGGCTGCCA]
[+] EMBL BM636666 [CCGGAAAGGTTGGCCGCGCACTTCCGTCGCTTATCGGGCCCGTGTCTGTGCCTGTATGTGTGTGTGTGGATAAGTGAAAGCACATTTGGAAAATTTTAAAAGCACAGCAGGGAAAACAGTTCTCCACCAGCTCCGAACGCAATCGGAGGCAATGGCGGCTTAACGGAGGTTGTAGTGCTGCTGGTGCTGGTGCTGATTGTACGGGAAGTGACGCATATCGCTCGGAGAGCGCCTGCCAAATGGGGCCTCGGTTTAGTGCAAATCAGTAGCTGTGCGTGTGCTTTGTAACGGGAAGCAGAAGAAGCAGGAGCGGCCCTTCCGAACAAACCTGCACCGGAAGCACGGAGACACACAAAAACCGAAAGGGGGACACGCGCGAGCAGCCGAGGATACGAGTTTAAAGGGCAAAAGTTACAGCATCAACGCCAACCATGTTCGTGAAGAAGCTCGCCTACTTGATGGTGGGTGGTGGCGGTCTGCCTGTTTGGCATTGGCTGCATCGCGGCGACCGGACTGCCGGGATCGGCTGCCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4862#0 CCGCCCACGCGTCCGAGCTCGCCTACTTGATGGTGGTGGTGGTGGTCTGCCTGTTTGGCA 60
consensus_4862#1 ------------------------------------------------------------
consensus_4862#0 TTGGCTGCATCGCCGCGACCGGACTACCGGGATCGGCTGCCAAGAGCGCAGGGGGCCACC 120
consensus_4862#1 ------------------------------------------------------------
consensus_4862#0 AGACGGGCGACGTGTTCACCAGCTCGTTTCTGGTGCGGTTTAAGCGCAGCCTGGACAAGC 180
consensus_4862#1 ------CCGGAAAGGTTGGCCGCGCACTTCCGTCGC----TTATCG-GGCCCGTGTCTGT 49
** * * * ** * *** * ** * * ** *** * *
consensus_4862#0 AGCTGGTACACGAGATTGCCTCGCGGAATGGATTCCAAAATTTGGGCGAGCTTCCTGGCA 240
consensus_4862#1 GCCTG---TATGTGTGTGTGTGGATAAGTGAAAGC--ACATTTGGAAAATTTTAAAAGCA 104
*** * * * ** * * * ** * * * ****** * ** ***
consensus_4862#0 GCAATGGTAAGGAGTTTCACTTCAAGCACACCACCCTGCCGTTGGTACGCACCAGGCGAA 300
consensus_4862#1 CAGCAGGGAAAACAGTTCTCCACCAGCTCCGAACGCAATCGGAGGCAATGGC--GGCTTA 162
** ** *** * * *** * ** * ** ** * * *** *
consensus_4862#0 GCATCTCCCATACGCGTGTGCTTAAAAAGGAACCACTGATACACACCGCAATACAGCAGT 360
consensus_4862#1 ACGGAGGTTGTA-GTGC-TGCTGGTGCTGGTGCTGATTGTACGGGAAGTGACGCAT---- 216
* ** * * **** ** * * *** * * **
consensus_4862#0 CCGGATTTAAGCGCGTCAAGCGCGGCTTCCGCCATGCCGTCCCGCTGAACTACATCCCGG 420
consensus_4862#1 ---------ATCGCTCGGAGAGCGCCTGCCAA-ATGGGGCCTCGGTTTAGTGCAAATCAG 266
* *** ** *** ** ** *** * * ** * * * ** * *
consensus_4862#0 ACAAGGCGCCCGGGTACGGTGGCGAGAATGTGCCGACCGATCCGTACTTCCCGTTCCAGT 480
consensus_4862#1 TAGCTGTGCGTGTGCTTTGTAACGGGAA---GCAGAAGAAGCAGGAGCGGCCCTTCCGAA 323
* ** * * ** ** *** ** ** * * * * ** ****
consensus_4862#0 GGTACTTGAAAAACACGGGACAAAACGGCGGCAAGGCGAAGCTCGACCTCAACGTGCTGG 540
consensus_4862#1 CAAACCTGCACCGGAAGCACGGAGACACACAAAAACCGAAAGGGGGAC---ACGCGCGAG 380
** ** * * * * ** ** **** * * *** ** *
consensus_4862#0 CTGCGTGGGACCAAGGCATTACCGGGAAAAACATTACCACCGCCATCATGGGACGACGGC 600
consensus_4862#1 CAGCCGAGGATACGAGTTTAAAGGGCAAAAGTTACAGCATCAACGCCA----ACCATGTT 436
* ** *** * * * ** **** * ** * * ** ** * *
consensus_4862#0 GTTGATTACATGCACGCGGATCTGAAGTTTAATTATAATGCCGAAGCGAGTTACGATTTT 660
consensus_4862#1 CGTGA--AGAAGCTCGCCTACTTGATGGTGGGTGGTGGCGGTCTGCCTGTTT--GGCATT 492
*** * * ** *** * *** * * * * * * ** * **
consensus_4862#0 AGCAGCAACGATCCGTTCCCTTACCCACGGTACACGGACGATTGGTTCAATAGCCATGGC 720
consensus_4862#1 GGCTGCATCGCGGCGACCGGACTGCCGGGATCGGCTGCCA-------------------- 532
** *** ** ** * ** * * * * *
consensus_4862#0 ACACGGTGCGCCGGTGAGGTAGCCGCCGCCCGGGACAACGGCATCTGCGGGGTGGGCGTT 780
consensus_4862#1 ------------------------------------------------------------
consensus_4862#0 GCGTACGATTCGAAGATCGCCGGCATCCGAATGCTGGACCAGCCGTACATGACCGATCTG 840
consensus_4862#1 ------------------------------------------------------------
consensus_4862#0 ATCGAGGCGAACTCGATGGGGCACGAGCCGCACAAGATCCACATCTACAGCGCGTCCTGG 900
consensus_4862#1 ------------------------------------------------------------
consensus_4862#0 GGCCCGACCGACGACGGCAAAACGGTGGACGGCCCACGGAACGCGACGATGCGCGCGATC 960
consensus_4862#1 ------------------------------------------------------------
consensus_4862#0 GTACAGGGTGTCAACGAGGGCCGGAACGGGCTGGGCAACATCTACGT 1007
consensus_4862#1 -----------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||