These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_490#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 655 fasta sequence [CCGCCCACGCGTCCGGTACTGTACTCATGAAGGAAAAACTAATCTCCAGTTGGTTCTAGGTTTTGTTCGTCCTCATCGATTGGTTAGTTTATGTTTCGTTGCGCTGGTGAATTGTGTTTTACGTACGCGATTGCGTTTGTATCAGCATGAAAATCCACTTCCGCGAACAGTACTGCTCGAATGGAGAGGAAATTCTCTACGTCACGCCAGATCACCAAGACACTGTCGTTCGCGTAACAGTTAAGGGTGAACGGCCATCGATACGGAAGCGCTTCAGCTTAAAGCGGTTTTTCCAGCATCTCTTCCTGCCTGTTGGATATCCGGACAGTGTGAGCAGTGACTACTTATCATACCAAAAGTGGGACACGTTGCAGGCTTTCTGTAGCACCATAAGTGGAACGCTAACAACTCATGCAATCCTCAAAGGAGTTGGAGTCGGAAGCGATGCGGCCAACCCACTTTCAGCAACAATTACATGGGTGCTCAAGGATGGTACTGGACATTTGGGTAGAATACTGTTCGCCTGGTGGAAAGGTTCGGAATTAGATATCGATTCGAAAAAGTGGCGCATCCGCGCGGATATACTGAACGATGTTGCGATGGCTATTGATCTGTTCGTGCTGCCGTACTATCCGAAGGCGTCTACGTACATACT] [+] EMBL BM589876 [CCGCCCACGCGTCCGGTACTGTACTCATGAAGGAAAAACTAATCTCCAGTTGGTTCTAGGTTTTGTTCGTCCTCATCGATTGGTTAGTTTATGTTTCGTTGCGCTGGTGAATTGTGTTTTACGTACGCGATTGCGTTTGTATCAGCATGAAAATCCACTTCCGCGAACAGTACTGCTCGAATGGAGAGGAAATTCTCTACGTCACGCCAGATCACCAAGACACTGTCGTTCGCGTAACAGTTAAGGGTGAACGGCCATCGATACGGAAGCGCTTCAGCTTAAAGCGGTTTTTCCAGCATCTCTTCCTGCCTGTTGGATATCCGGACAGTGTGAGCAGTGACTACTTATCATACCAAAAGTGGGACACGTTGCAGGCTTTCTGTAGCACCATAAGTGGAACGCTAACAACTCATGCAATCCTCAAAGGAGTTGGAGTCGGAAGCGATGCGGCCAACCCACTTTCAGCAACAATTACATGGGTGCTCAAGGATGGTACTGGACATTTGGGTAGAATACTGTTCGCCTGGTGGAAAGGTTCGGAATTAGATATCGATTCGAAAAAGTGGCGCATCCGCGCGGATATACTGAACGATGTTGCGATGGCTATTGATCTGTTCGTGCTGCCGTACTATCCGAAGGCGTCTACGTACATACT] consensusID : consensus_490#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 199 fasta sequence [CCGAACAAATGGAGCTGTCCGTACTGTACTCATGCAGGAAAAACTAATCTCCAGTTGGTTCTAGGTTTTGTTCGTCCTCATCGATTGGTTAGTTTATGTTTCGTTGCGCTGGTGAATTGTGTTTTACGTACGCGATTGCGTTTGTATCAGCATGAAAATCCACTTCCGCGAACAGTACTGCTCGAATGGAGAGGAAATT] [+] EMBL BM600065 [CCGAACAAATGGAGCTGTCCGTACTGTACTCATGCAGGAAAAACTAATCTCCAGTTGGTTCTAGGTTTTGTTCGTCCTCATCGATTGGTTAGTTTATGTTTCGTTGCGCTGGTGAATTGTGTTTTACGTACGCGATTGCGTTTGTATCAGCATGAAAATCCACTTCCGCGAACAGTACTGCTCGAATGGAGAGGAAATT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_490#0 -----CCGCCCACGCGTCCGGTACTGTACTCATGAAGGAAAAACTAATCTCCAGTTGGTT 55 consensus_490#1 CCGAACAAATGGAGCTGTCCGTACTGTACTCATGCAGGAAAAACTAATCTCCAGTTGGTT 60 * ** * ************** ************************* consensus_490#0 CTAGGTTTTGTTCGTCCTCATCGATTGGTTAGTTTATGTTTCGTTGCGCTGGTGAATTGT 115 consensus_490#1 CTAGGTTTTGTTCGTCCTCATCGATTGGTTAGTTTATGTTTCGTTGCGCTGGTGAATTGT 120 ************************************************************ consensus_490#0 GTTTTACGTACGCGATTGCGTTTGTATCAGCATGAAAATCCACTTCCGCGAACAGTACTG 175 consensus_490#1 GTTTTACGTACGCGATTGCGTTTGTATCAGCATGAAAATCCACTTCCGCGAACAGTACTG 180 ************************************************************ consensus_490#0 CTCGAATGGAGAGGAAATTCTCTACGTCACGCCAGATCACCAAGACACTGTCGTTCGCGT 235 consensus_490#1 CTCGAATGGAGAGGAAATT----------------------------------------- 199 ******************* consensus_490#0 AACAGTTAAGGGTGAACGGCCATCGATACGGAAGCGCTTCAGCTTAAAGCGGTTTTTCCA 295 consensus_490#1 ------------------------------------------------------------ consensus_490#0 GCATCTCTTCCTGCCTGTTGGATATCCGGACAGTGTGAGCAGTGACTACTTATCATACCA 355 consensus_490#1 ------------------------------------------------------------ consensus_490#0 AAAGTGGGACACGTTGCAGGCTTTCTGTAGCACCATAAGTGGAACGCTAACAACTCATGC 415 consensus_490#1 ------------------------------------------------------------ consensus_490#0 AATCCTCAAAGGAGTTGGAGTCGGAAGCGATGCGGCCAACCCACTTTCAGCAACAATTAC 475 consensus_490#1 ------------------------------------------------------------ consensus_490#0 ATGGGTGCTCAAGGATGGTACTGGACATTTGGGTAGAATACTGTTCGCCTGGTGGAAAGG 535 consensus_490#1 ------------------------------------------------------------ consensus_490#0 TTCGGAATTAGATATCGATTCGAAAAAGTGGCGCATCCGCGCGGATATACTGAACGATGT 595 consensus_490#1 ------------------------------------------------------------ consensus_490#0 TGCGATGGCTATTGATCTGTTCGTGCTGCCGTACTATCCGAAGGCGTCTACGTACATACT 655 consensus_490#1 ------------------------------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||