Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 4948 cluster # 4948       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4948#0 length = 1031 sequences # 4  

consensusID : consensus_4948#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1031
fasta sequence
                              [TTATTCCGAAAAATGCCTCCCGTTCATACGCCTTGATAACTGGCACGGAGTACTATGTCCAGTCGAGAGCGAACGCCCATGTATGCTGTAATCTACTGCACTCGAGCTTCCACTGTTACTGCTTACATTCTTCGTGAAACGGTTCCAACGTTCGTAAATCGCGCCAGGTCGGTGGAAGTGTGTTGTGCAGATGTTTTCCACACTTTTTACACGGATCAGCGAAAAGGGTTACGTAGCTTCGGAACCACGTGATAAAGCTGCGTATGGCCAGCTCCGGCAGTTTGGGTGAGAAAAAGTGCAACATTGCCGAATGTGCATGATCCTGCACCTTGCGGAATACCTGATGTCTCGATTCGGTCCATTGCTCGTCGACCCCGTCCAGCAGTTACTCCTCGTACCCTTTCACCGTCACCCATTCGATCAGCAGTCCCTTCAGTATGACTGCAGCGCGCAGCACACGGGCAATGGTTATGTGTAAAATTGCATTCGTCATAAAGGGGCGTGCAATTTTCAGGTTCATGTTGTTGTAATGTATGCTACCGATCAGATTTTCCACCATTTGCGGTGTGGCCAGATGGCTCGAGGGAAGCGACCGTCGGCGCTTGGTGTTGGTGTAGTACGAGCGTTTCAACGAGTTCTGCTGCAGTAGCGTCGAGGCGAAGGTGCTGTACTCGTGCAGCTTGTCGTGCCATTTGTAGCTCTGCACCAGGTGCGGATACAGTGCCTGCCGTTCGAGGTTCGTCTCCAGCGACAGGTATGCCGAGTTGGCAAGGGTCAGCGGTGTCTGGGGTGGCGTTAGATCGTTTATGCAGGATTCAAAGTCTTTGAGATTAGCGTTAACAGAGTTGAGTAGCTCCTGTAGCTCTTGAAGAAACTTCTGCTCCTTGCCCTCTTCGCCATGGTCTGCACGCACTCCTGTGCCGAGCGTTTCGAACACTTGTCCTACACTCGAGCGCAACACGCGCAACTGAGAGAGAGCGTTGTTAATTGGTTCTAAATTCATGATTTTTTGGCAAACTTTCTGCAAGCCG]

[+] EMBL CNS08WH1             [TTATTCCGAAAAATGCCTCCCGTTCATACGCCTTGATAACTGGCACGGAGTACTATGTCCAGTCGAGAGCGAACGCCCATGTATGCTGTAATCTACTGCACTCGAGCTTCCACTGTTACTGCTTACATTCTTCGTGAAACGGTTCCAACGTTCGTAAATCGCGCCAGGTCGGTGGAAGTGTGTTGTGCAGATGTTTTCCACACTTTTTACACGGATCAGCGAAAAGGGTTACGTAGCTTCGGAACCACGTGATAAAGCTGCGTATGGCCAGCTCCGGCAGTTTGGGTGAGAAAAAGTGCAACATTGCCGAATGTGCATGATCCTGCACCTTGCGGAATACCTGATGTCTCGATTCGGTCCATTGCTCGTCGACCCCGTCCAGCAGTTACTCCTCGTACCCTTTCACCGTCACCCATTCGATCAGCAGTCCCTTCAGTATGACTGCAGCGCGCAG ACACGGGCAATGGTTATGTGTAAAATTGCATTCGTCATAAAGGGGCGTGCAATTTTCAGGTTCATGTTGTTGTAATGTATGCTACCGATCAGATTTTCCACCATTTGCGGTGTGGCCAGATGGCTCGAGGGAAGCGACCGTCGGCGCTTGGTGTTGGTGTAGTACGAGCGTTTCAACGAGTTCTGCTGCAGTAGCGTCGAGGCGAAGGTGCTGTACTCGTGCAGCTTGTCGTGCCATTTGTAGCTCTGCACCATTTTTTTTTTTTTTTTCTTCCGTTCGAGGTTCGTCTCCAGCGACAGGTATGCCGAGTTGGCAAGGGTCAGCGGTGTCTGGGGTGGCGTTAGATCGTTTATGCAGGATTCAAAGTCTTTGAGATTAGCGTTAACAGAGTTGAGTAGCTCCTGTAGCTCTTGAAGAAACTTCTGCTCCTTGCCCTCTTCGCCATGGTCTGCACGCACTCCTGTTCCGAGCGTTTCGAACACTTGTTCTACACTCGAGCGCAACAC                                                                      ]
[-] EMBL CNS08WH0             [                                           CACGGAGTACTATGTCCAGTCGAGAGCGAACGCCCATGTATGCTGTAATCTACTGCACTCGAGCTTCCACTGTAACTGCTTACATTCTTCGTGAAACGGTTCCAACGTTCGTAAATCGCGCCAGGTCGGTGGAAGTGTGTTGTGCAGATGTTTTCCACACTTTTTACACGGATCAGCGAAAAGGGTTACGTAGCTTCGGAACCACGTGATAAAGCTGCGTATGGCCAGCTCCGGCAGTGTGGAAAAGAAAAAGTGCAACATTGCCGAATGTGCATGATCCTGCACCTTGCGGAATACCTGATGTCTCGATTCGGTCCATTGCTCGTCGACCCCGTCCAGCAGTGACTCCTCGTACCCTTTCACCGTCACCCATTCGATCAGCAGTCCCTTCAGTATGACTGCAGCGCGCAGCACACGGGCAATGGTTATGTGTAAAATTGCATTCGTCATAAAGGGGCGTGCAATTTTCAGGTTCATGTTGTTGTAATGTATGCTACCGATCAGATTTTCCACCATTTGCGGTGTGGCCAGATGGCTCGAGGGAAGCGACCGTCGGCGCTTGGTGTTGGTGTAGTACGAGCGTTTCAACGAGTTCTGCTGCAGTAGCGTCGAGGCGAAGGTGCTGTACTCGTGCAGCTTGTCGTGCCATTTGTAGCTCTGCACCAGGTGCGGATACAGTGCCTGCCGTTCGAGGTTCGTCTCCAGCGACAGGTATGCCGAGTTGGCAAGGGTCAGCGGTGTCTGGGGTGGCGTTAGATCGTTTATGCAGGATTCAAAGTCTTTGAGATTAGCGTTAACAGAGTTGAGTAGCTCCTGTAGCTCTTGAAGAAACTTCTGCTCCTTGCCCTCTTCGCCATGGTCTGCACGCACTCCTGTGCCGAGCGTTTCGAACACTTGTCCTACACTCGAGCGCAACACGCGCAACTGAGAGAGAGCGTTGTTAATTGGTTCTAAATTCA                             ]
[-] EMBL BX603327             [                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGTATGACTGCAGCGCGCAGCACACGGGCAATGGTTATGTGTAAAATTGCATTCGTCATAAAGGGGCGTGCAATTTTCAGGTTCATGTTGTTGTAATGTATGCTACCGATCAGATTTTCCACCATTTGCGGTGTGGCCAGATGGCTCGAGGGAAGCGACCGTCGGCGCTTGGTGTTGGTGTAGTACGAGCGTTTCAACGAGTTCTGCTGCAGTAGCGTCGAGGCGAAGGTGCTGTACTCGTGGAGCTTGTCGTGCCATTTGTAGCTCTGCACCAGGTGCGGATACAATGCCTGCCGTTCGAGGTTCGTCTCCAGCGACAGGTATGCCGAGTTGGCAAGGGTCAGCGGCGTCTGGGGTGGCGTTAGATCGTTTATGCAGGATTCAAAGTCTTTGAGATTAGCGTTAACCGAGTTGAGTAGCTCCTGTAGCTCTTGAAGAAACTTCTGCTCCTTGCCCTCTTCGCCATGGTCTGCACGCACTCCTGTGCCGAGCGTTTCGAACACTTGACCTACACTCGAGCGCAACACGCGCAACTGAGAGAGAGCGTTGTTAATTGGTTCTAAATTCATGATTTTTTGGCAAACTTTCTGCAAGCCG]
[-] EMBL BX617990             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GACCGTCGGCGCTTGGTGTTGGTGTAGTACGAGCGTTTCAACGAGTTCTGCTGCAGTAGCGTCGAGGCGAAGGTGCTGTACTCGTGCAGCTTGTCGTGCCATTTGTAGCTCTGCACCAGGTGCGGATACAGTGCCTGCCGTTCGAGGTTCGTCTCCAGCGACAGGTATGCCGAGTTGGCAAGGGTCAGCGGTGTCTGGGGTGGCGTTAGATCGTTTATGCAGGATTCAAAGTCTTTGAGATTAGCGTTAACAGAGTTGAGTAGCTCCTGTAGCTCTTGAAGAAACATATGCTCCTTGCCCTCTTCGCCATGGTCTGCACGCACTCCT                                                                                                                  ]


>consensus_4948#0 TTATTCCGAAAAATGCCTCCCGTTCATACGCCTTGATAACTGGCACGGAGTACTATGTCC AGTCGAGAGCGAACGCCCATGTATGCTGTAATCTACTGCACTCGAGCTTCCACTGTTACT GCTTACATTCTTCGTGAAACGGTTCCAACGTTCGTAAATCGCGCCAGGTCGGTGGAAGTG TGTTGTGCAGATGTTTTCCACACTTTTTACACGGATCAGCGAAAAGGGTTACGTAGCTTC GGAACCACGTGATAAAGCTGCGTATGGCCAGCTCCGGCAGTTTGGGTGAGAAAAAGTGCA ACATTGCCGAATGTGCATGATCCTGCACCTTGCGGAATACCTGATGTCTCGATTCGGTCC ATTGCTCGTCGACCCCGTCCAGCAGTTACTCCTCGTACCCTTTCACCGTCACCCATTCGA TCAGCAGTCCCTTCAGTATGACTGCAGCGCGCAGCACACGGGCAATGGTTATGTGTAAAA TTGCATTCGTCATAAAGGGGCGTGCAATTTTCAGGTTCATGTTGTTGTAATGTATGCTAC CGATCAGATTTTCCACCATTTGCGGTGTGGCCAGATGGCTCGAGGGAAGCGACCGTCGGC GCTTGGTGTTGGTGTAGTACGAGCGTTTCAACGAGTTCTGCTGCAGTAGCGTCGAGGCGA AGGTGCTGTACTCGTGCAGCTTGTCGTGCCATTTGTAGCTCTGCACCAGGTGCGGATACA GTGCCTGCCGTTCGAGGTTCGTCTCCAGCGACAGGTATGCCGAGTTGGCAAGGGTCAGCG GTGTCTGGGGTGGCGTTAGATCGTTTATGCAGGATTCAAAGTCTTTGAGATTAGCGTTAA CAGAGTTGAGTAGCTCCTGTAGCTCTTGAAGAAACTTCTGCTCCTTGCCCTCTTCGCCAT GGTCTGCACGCACTCCTGTGCCGAGCGTTTCGAACACTTGTCCTACACTCGAGCGCAACA CGCGCAACTGAGAGAGAGCGTTGTTAATTGGTTCTAAATTCATGATTTTTTGGCAAACTT TCTGCAAGCCG



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)