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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4960#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 947 fasta sequence
[CCGGGGGCCTGATCCAACCATACATACCAGCCGTACAAGACCGTGATGAGCTCCCACTGGTGGTACATTTACCTCATAGCACTCAGCCTGCTGGCCTGGCTGGTCGATGGGCGACGGGAGGCCAAGTTCAACTGCACGCTGACCGCCAACTACTACGACTGTCTGTTCCGGGACGTGATCATACGCAGCGAGGCGGACGCGGACAGCATCTTCTTCGGCGTGCAGAACTTCAACGACACCAGCATCGCATTCCGCGACTCCTCCATGGTGGTGCTGCCGAAGAAGATCTTCGAAACGTTCCCGGCGATCCAGTACCTGTCGAGCGACGCGTGCCACCTGTACGACAACCGGCTCACGCGGCTGAACAACTTCGTGTTCAACGGTGCGCTGCAGCTCGAGATACTGTCGCTGTACAACAACACGATCAAGCAGCTGGAGGAGCACGCGTTCGATGGGCTGGGCCATCTGCGCCTGCTCTACATGGACGAGAACCAGCTGGAGAAGCTGCCGGAGGGTCTGTTTTCCGGGCTGGAGGAGCTGCAGATACTGGAGCTGCAGCACAACCGCATCAAGGAGATCAACGACGACCAGTTCGTGCTGTGCCCGATGCTGCGCGAGCTCAACCTGAGCGCGAACATGATCAGCACGTTCAACATGTCGCAGCTGCAGTCGCTGAACAAGCTGGAAAACGCTCGACATTGCGCGGAACTATCTGGACGAGGTGTTCGTCACCAAGTACCTCCGGACGCTGAACGCGCAGGAAAACCAGATCAGCCGGATCGTGATGGACCAGGGCGACTTCTTTCAGCTGACGCACCTCAACCTCTCCCGCAACAACATCGCGAACATTAACAACATCTTCAAGGTTCCGCAACCTGATCGAGCTGGACGTGTCGTACAACGAGCTGGTAACGCTGGACTTTGTCATCTTCGCCTTCATGAAGAAC]
[+] EMBL BM657636 [CCGGGGGCCTGATCCAACCATACATACCAGCCGTACAAGACCGTGATGAGCTCCCACTGGTGGTACATTTACCTCATAGCACTCAGCCTGCTGGCCTGGCTGGTCGATGGGCGACGGGAGGCCAAGTTCAACTGCACGCTGACCGCCAACTACTACGACTGTCTGTTCCGGGACGTGATCATACGCAGCGAGGCGGACGCGGACAGCATCTTCTTCGGCGTGCAGAACTTCAACGACACCAGCATCGCATTCCGCGACTCCTCCATGGTGGTGCTGCCGAAGAAGATCTTCGAAACGTTCCCGGCGATCCAGTACCTGTCGAGCGACGCGTGCCACCTGTACGACAACCGGCTCACGCGGCTGAACAACTTCGTGTTCAACGGTGCGCTGCAGCTCGAGATACTGTCGCTGTACAACAACACGATCAAGCAGCTGGAGGAGCACGCGTTCGATGGGCTGGGCCATCTGCGCCTGCTCTACATGGACGAGAACCAGCTGGAGAAGCTGCCGGAGGGTCTGTTTTCCGGGCTGGAGGAGCTGCAGATACTGGAGCTGCAGCACAACCGCATCAAGGAGATCAACGACGACCAGTTCGTGCTGTGCCCGATGCTGCGCGAGCTCAACCTGAGCGCGAACATGATCAGCACGTTCAACATGTCGCAGCTGCAGTCGCTGAACAAGCTGGAAAACGCTCGACATTGCGCGGAACTATCTGGACGAGGTGTTCGTCACCAAG ]
[+] EMBL BX609448 [ GCCCAATGCTGCGCGAGCTCAACCTGAGCGCGAACATGATCAGCACGTTCAACATGTCGCAGCTGCAGTCGCTGAACAAGCTGG AAACGCTCGACATTGCGCGGAACTATCTGGACGAGGTGTTCGTCACCAAGTACCTCCGGACGCTGAACGCGCAGGAAAACCAGATCAGCCGGATCGTGATGGACCAGGGCGACTTCTTTCAGCTGACGCACCTCAACCTCTCCCGCAACAACATCGCGAACATTAACAACATCTTCAAGGTTCCGCAACCTGATCGAGCTGGACGTGTCGTACAACGAGCTGGTAACGCTGGACTTTGTCATCTTCGCCTTCATGAAGAAC]
consensusID : consensus_4960#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 687 fasta sequence
[CAACCGGACTGGGGCCTGATCCAACCATACATACCAGCCGTACAAGACCGTGATGAGCTCCCACTGGTGGTACATTTACCTCATAGCACTCAGCCTGCTGGCCTGGCTGGTCGATGGGCGACGGGAGGCCAAGTTCAACTGCACGCTGACCGCCAACTACTACGACTGCCTGTTCCGGGACGTGATCATACGCAGCGAGGCGGACGCGGACAGCATCTTCTCCGGCGTGCAGAACTTCAACGACACCAGCATCGCGTTCCGCGACTCCTCCATGGTGCTGCTGCCGAAGAAGATCTTCGAAACGTTCCCGGCGATCCAGTACCTGTCGAGCGACGCGTGCCACATCCAGAAGCTGCTCGGCGGCACGTTCGCGAACGCGCAGCGCCTGCAGGAGCTGCACCTGTACGACAACCGGCTTACGCGGCTGAACAACTTCGTGTTCAACGGTGCGCTGCAGCTCGAGATACTGTCGCTGTACAACAACACGATCAAGCAGCTGGAGGAGCACGCGTTCGATGGGCTGGGCCATCTGCGCCTGCTCTACATGGACGAGAACCAGCTGGAGAAGCTGCCGGAGGGTCTGTTTTCCGGGCTGGAGGAGCTGCAGATACTGGAGCTGCAGCACAACCGCATCAAGGAGATCAACGACGACCAGTTCGTGCTGTGCCCAATGCTGCGCGAGCTCAA]
[+] EMBL BX607993 [CAACCGGACTGGGGCCTGATCCAACCATACATACCAGCCGTACAAGACCGTGATGAGCTCCCACTGGTGGTACATTTACCTCATAGCACTCAGCCTGCTGGCCTGGCTGGTCGATGGGCGACGGGAGGCCAAGTTCAACTGCACGCTGACCGCCAACTACTACGACTGCCTGTTCCGGGACGTGATCATACGCAGCGAGGCGGACGCGGACAGCATCTTCTCCGGCGTGCAGAACTTCAACGACACCAGCATCGCGTTCCGCGACTCCTCCATGGTGCTGCTGCCGAAGAAGATCTTCGAAACGTTCCCGGCGATCCAGTACCTGTCGAGCGACGCGTGCCACATCCAGAAGCTGCTCGGCGGCACGTTCGCGAACGCGCAGCGCCTGCAGGAGCTGCACCTGTACGACAACCGGCTTACGCGGCTGAACAACTTCGTGTTCAACGGTGCGCTGCAGCTCGAGATACTGTCGCTGTACAACAACACGATCAAGCAGCTGGAGGAGCACGCGTTCGATGGGCTGGGCCATCTGCGCCTGCTCTACATGGACGAGAACCAGCTGGAGAAGCTGCCGGAGGGTCTGTTTTCCGGGCTGGAGGAGCTGCAGATACTGGAGCTGCAGCACAACCGCATCAAGGAGATCAACGACGACCAGTTCGTGCTGTGCCCAATGCTGCGCGAGCTCAA]
consensusID : consensus_4960#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 525 fasta sequence
[CCGCCCACGCGTCCGCTCCCACTGGTGGTACATTTAGTGAGTGAACTGCAGCCGAAACATTGCTTGCAATGCAATGCGTCCGAAAATGCATTCTAATACCCACCCTCTCACCTACACTCACCTCACAGCCTCATAGCACTCAGCCTGCTGGCCTGGCTGGTCGATGGGCGACGGGAGGCCAAGTTCAACTGCACGCTGACCGCCAACTACTACGACTGCCTGTTCCGGGACGTGATCATACGCAGCGAGGCGGACGCGGACAGCATCTTCTTCGGCGTGCAGAACTTCAACGACACCAGCATCGCGTTCCGCGACTCCTCCATGGTGCTGCTGCCGAAGAAGATCTTCGAAACGTTCCCGGCGATCCAGTACCTGTCGAGCGACGCGTGCCACATCCAGAAGCTGCTCGGCGGCACGTTCGCGAACGCGCAGCGCCTGCAGGAGCTGCACCTGTACGACAACCGGCTTACGCGGCTGAACAACTTCGTGTTCAACGGTGCGCTGCAGCTCGAGATACTGTCGCTG]
[+] EMBL BM634215 [CCGCCCACGCGTCCGCTCCCACTGGTGGTACATTTAGTGAGTGAACTGCAGCCGAAACATTGCTTGCAATGCAATGCGTCCGAAAATGCATTCTAATACCCACCCTCTCACCTACACTCACCTCACAGCCTCATAGCACTCAGCCTGCTGGCCTGGCTGGTCGATGGGCGACGGGAGGCCAAGTTCAACTGCACGCTGACCGCCAACTACTACGACTGCCTGTTCCGGGACGTGATCATACGCAGCGAGGCGGACGCGGACAGCATCTTCTTCGGCGTGCAGAACTTCAACGACACCAGCATCGCGTTCCGCGACTCCTCCATGGTGCTGCTGCCGAAGAAGATCTTCGAAACGTTCCCGGCGATCCAGTACCTGTCGAGCGACGCGTGCCACATCCAGAAGCTGCTCGGCGGCACGTTCGCGAACGCGCAGCGCCTGCAGGAGCTGCACCTGTACGACAACCGGCTTACGCGGCTGAACAACTTCGTGTTCAACGGTGCGCTGCAGCTCGAGATACTGTCGCTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4960#0 --------------------------------------------CCGGGGGCCTGATCCA 16
consensus_4960#1 -------------------------------------CAACCGGACTGGGGCCTGATCCA 23
consensus_4960#2 CCGCCCACGCGTCCGCTCCCACTGGTGGTACATTTAGTGAGTGAACTGCAGCCGAAACAT 60
* * *** * *
consensus_4960#0 ACCATACA-TACCAGCCGTACAAGACCG-----TGATGAGCTCCCACTGGTGGTACATTT 70
consensus_4960#1 ACCATACA-TACCAGCCGTACAAGACCG-----TGATGAGCTCCCACTGGTGGTACATTT 77
consensus_4960#2 TGCTTGCAATGCAATGCGTCCGAAAATGCATTCTAATACCCACCCTCTCACC-TACACTC 119
* * ** * * * *** * * * * * ** * *** ** **** *
consensus_4960#0 ACCTCA--------TAGCACTCAGCCTGCTGGCCTGGCTGGTCGATGGGCGACGGGAGGC 122
consensus_4960#1 ACCTCA--------TAGCACTCAGCCTGCTGGCCTGGCTGGTCGATGGGCGACGGGAGGC 129
consensus_4960#2 ACCTCACAGCCTCATAGCACTCAGCCTGCTGGCCTGGCTGGTCGATGGGCGACGGGAGGC 179
****** **********************************************
consensus_4960#0 CAAGTTCAACTGCACGCTGACCGCCAACTACTACGACTGTCTGTTCCGGGACGTGATCAT 182
consensus_4960#1 CAAGTTCAACTGCACGCTGACCGCCAACTACTACGACTGCCTGTTCCGGGACGTGATCAT 189
consensus_4960#2 CAAGTTCAACTGCACGCTGACCGCCAACTACTACGACTGCCTGTTCCGGGACGTGATCAT 239
*************************************** ********************
consensus_4960#0 ACGCAGCGAGGCGGACGCGGACAGCATCTTCTTCGGCGTGCAGAACTTCAACGACACCAG 242
consensus_4960#1 ACGCAGCGAGGCGGACGCGGACAGCATCTTCTCCGGCGTGCAGAACTTCAACGACACCAG 249
consensus_4960#2 ACGCAGCGAGGCGGACGCGGACAGCATCTTCTTCGGCGTGCAGAACTTCAACGACACCAG 299
******************************** ***************************
consensus_4960#0 CATCGCATTCCGCGACTCCTCCATGGTGGTGCTGCCGAAGAAGATCTTCGAAACGTTCCC 302
consensus_4960#1 CATCGCGTTCCGCGACTCCTCCATGGTGCTGCTGCCGAAGAAGATCTTCGAAACGTTCCC 309
consensus_4960#2 CATCGCGTTCCGCGACTCCTCCATGGTGCTGCTGCCGAAGAAGATCTTCGAAACGTTCCC 359
****** ********************* *******************************
consensus_4960#0 GGCGATCCAGTACCTGTCGAGCGACGCGTGCCAC-------------------------- 336
consensus_4960#1 GGCGATCCAGTACCTGTCGAGCGACGCGTGCCACATCCAGAAGCTGCTCGGCGGCACGTT 369
consensus_4960#2 GGCGATCCAGTACCTGTCGAGCGACGCGTGCCACATCCAGAAGCTGCTCGGCGGCACGTT 419
**********************************
consensus_4960#0 -------------------------------CTGTACGACAACCGGCTCACGCGGCTGAA 365
consensus_4960#1 CGCGAACGCGCAGCGCCTGCAGGAGCTGCACCTGTACGACAACCGGCTTACGCGGCTGAA 429
consensus_4960#2 CGCGAACGCGCAGCGCCTGCAGGAGCTGCACCTGTACGACAACCGGCTTACGCGGCTGAA 479
***************** ***********
consensus_4960#0 CAACTTCGTGTTCAACGGTGCGCTGCAGCTCGAGATACTGTCGCTGTACAACAACACGAT 425
consensus_4960#1 CAACTTCGTGTTCAACGGTGCGCTGCAGCTCGAGATACTGTCGCTGTACAACAACACGAT 489
consensus_4960#2 CAACTTCGTGTTCAACGGTGCGCTGCAGCTCGAGATACTGTCGCTG-------------- 525
**********************************************
consensus_4960#0 CAAGCAGCTGGAGGAGCACGCGTTCGATGGGCTGGGCCATCTGCGCCTGCTCTACATGGA 485
consensus_4960#1 CAAGCAGCTGGAGGAGCACGCGTTCGATGGGCTGGGCCATCTGCGCCTGCTCTACATGGA 549
consensus_4960#2 ------------------------------------------------------------
consensus_4960#0 CGAGAACCAGCTGGAGAAGCTGCCGGAGGGTCTGTTTTCCGGGCTGGAGGAGCTGCAGAT 545
consensus_4960#1 CGAGAACCAGCTGGAGAAGCTGCCGGAGGGTCTGTTTTCCGGGCTGGAGGAGCTGCAGAT 609
consensus_4960#2 ------------------------------------------------------------
consensus_4960#0 ACTGGAGCTGCAGCACAACCGCATCAAGGAGATCAACGACGACCAGTTCGTGCTGTGCCC 605
consensus_4960#1 ACTGGAGCTGCAGCACAACCGCATCAAGGAGATCAACGACGACCAGTTCGTGCTGTGCCC 669
consensus_4960#2 ------------------------------------------------------------
consensus_4960#0 GATGCTGCGCGAGCTCAACCTGAGCGCGAACATGATCAGCACGTTCAACATGTCGCAGCT 665
consensus_4960#1 AATGCTGCGCGAGCTCAA------------------------------------------ 687
consensus_4960#2 ------------------------------------------------------------
consensus_4960#0 GCAGTCGCTGAACAAGCTGGAAAACGCTCGACATTGCGCGGAACTATCTGGACGAGGTGT 725
consensus_4960#1 ------------------------------------------------------------
consensus_4960#2 ------------------------------------------------------------
consensus_4960#0 TCGTCACCAAGTACCTCCGGACGCTGAACGCGCAGGAAAACCAGATCAGCCGGATCGTGA 785
consensus_4960#1 ------------------------------------------------------------
consensus_4960#2 ------------------------------------------------------------
consensus_4960#0 TGGACCAGGGCGACTTCTTTCAGCTGACGCACCTCAACCTCTCCCGCAACAACATCGCGA 845
consensus_4960#1 ------------------------------------------------------------
consensus_4960#2 ------------------------------------------------------------
consensus_4960#0 ACATTAACAACATCTTCAAGGTTCCGCAACCTGATCGAGCTGGACGTGTCGTACAACGAG 905
consensus_4960#1 ------------------------------------------------------------
consensus_4960#2 ------------------------------------------------------------
consensus_4960#0 CTGGTAACGCTGGACTTTGTCATCTTCGCCTTCATGAAGAAC 947
consensus_4960#1 ------------------------------------------
consensus_4960#2 ------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||