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Anopheles gambiae
cluster # 5000 cluster # 5000       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5000#0 length = 748 sequences # 4  

consensusID : consensus_5000#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 748
fasta sequence
                              [CAGCTTTTATGATTAAATGCATGCAAGCCTTTGGTCACTCATTTTCACTTGTTTTTCATTTGCTTTCGGCTACGACGTTTAATTCTAGACCAACAACCCCTGTCTGTACACTTGTGTGTTTATGTACGTGTGTGTGTCGGATCCTGTCAACCTCACACCTCCACACCGTACGTACGGTCAACGTCGTTGTACGAGAAAGAGGCAGCGCTTATATCCGATTCCGGATCTGTGCCGGTACCGATACTGGTCGTCGCCAACCGGTGTGCTGCCATTGTACCGTTGGTCGGCGTACGGCTGCCGCCACATTTGTCCCCATCCCGCTCTGAAGCGGACCGCATCAGTCCGATGGTGGCCTGCGTGGTAGACGACGGAAAAATTTCCGACGGCAGCTCCGGCACGGACACTCCACGACGCGTAAAGAATGCCATCTTTTCTTTGAACGAGATTGAATCGAGCTTGCCTTTGCCGACCTTCGTCTTGCGCAACTTGTAGATCTCCTTGGAAGTTTTCATCAGCAGCTTCGCCAGCTGGCGCTCCTCGGGCGTGACCGCATTGACCGCCTTTACCAGCCGTAGGAAGTCCTCGTTCTCGAGCGCCCAGGCTGCCACCTTGACGTCGTTGTTGTCGCGGGCCTGCTCGAGCCGGTGCTTCAGCT-CCGCAGCCGCCCGATCTCGTCGGTGAGCGTTTCCAGCTTCGTCTGCTGGGCCTTCAGATCGAGCTCGAGATCGAGACTGGTGCGCGGCACTGC]

[-] EMBL BM592251             [CAGCTTTTATGATTAAATGCATGCAAGCCTTTGGTCACTCATTTTCACTTGTTTTTCATTTGCTTTCGGCTACGACGTTTAATTATAGACCAACAACCCCTGTCTGTACACTTGTGTGTTTATGTACGTGTGTGTGTCGGATCCTGTCAACCTCACACCTCCACACCGTACGTACGGTCAACGTCGTTGTACGAGAAAGAGGCAGCGCTTATATCCGATTCCGGATCTGTGCCGGTACCGATACTGGTCGTCGCCAACCGGTGTGCTGCCATTGTACCGTTGGTCGGCGTACGGCTGCCGCCACATTTGTCCCCATCCCGCTCTGAAGCGGACCGCATCAGTCCGATGGTGGCCTGCGTGGTAGACGACGGAAAAATTTCCGACGGCAGCTCCGGCACGGACACTCCACGACGCGTAAAGAATGCCATCTTTTCTTTGAACGAGATTGAATCGAGCTTGCCTTTGCCGACCTTCGTCTTGCGCAACTTGTAGATCTCCTTGGAAGTTTTCATCAGCAGCTTCGCCAGCTGGCGCTCCTCGGGCGTGACCGCATTGACCGCCTTTACCAGCCGTAGGAAGTCCTCGTTCTCGAGCGCCCAGGCTGCCACCTTGACGTCGcgg                                                                                                                                ]
[+] EMBL BM621492             [       TATGATTAAATGCATGCAAGCCTTTGGTCACTCATTTTCACTTGTTTTTCATTTGCTTTCGGCTACGACGTTTAATTCTAGACCAACAACCCCTGTCTGTACACTTGTGTGTTTATGTACGTGTGTGTGTCGGATCCTGTCAACCTCACACCTCCACACCGTACGTACGGTCAACGTCGTTGTACGAGAAAGAGGCAGCGCTTATATCCGATTCCGGATCTGTGCCGGTACCGATACTGGTCGTCGCCAACCGGTGTGCTGCCATTGTACCGTTGGTCGGCGTACGGCTGCCGCCACATTTGTCCCCATCCCGCTCTGAAGCGGACCGCATCAGTCCGATGGTGGCCTGCGTGGTAGACGACGGAAAAATTTCCGACGGCAGCTCCGGCACGGACACTCCACGACGCGTAAAGAATGCCATCTTTTCTTTGAACGAGATTGAATCGAGCTTGCCTTTGCCGACCTTCGTCTTGCGCAACTTGTAGATCTCCTTGGAAGTTTTCATCAGCAGCTTCGCCAGCTGGCGCTCCTCGGGCGTGACCGCATTGACCGCCTTTACCAGCCGTAGGAAGTCCTCGTTCTCGAGCGCCCAGGCTGCCACCTTGACGTCGTTGTTGTCGCGG                                                                                                                       ]
[+] EMBL AGA283248            [                                                  gaacgaggTTTGCTTTCGGCTACGACGTTTAATTCTAGACCAACAACCCCTGTCTGTACACTTGTGTGTTTATGTACGTGTGTGTGTCGGATCCTGTCAACCTCACACCTCCACACCGTACGTACGGTCAACGTCGTTGTACGAGAAAGAGGCAGCGCTTATATCCGATTCCGGATCTGTGCCGGTACCGATACTGGTCGTCGCCAACCGGTGTGCTGCCATTGTACCGTTGGTCGGCGTACGGCTGCCGCCACATTTGTCCCCATCCCGCTCTGAAGCGGACCGCATCAGTCCGATGGTGGCCTGCGTGGTAGACGACGGAAAAATTTCCGACGGCAGCTCCGGCACGGACACTCCACGACGCGTAAAGAATGCCATCTTTTCTTTGAACGAGATTGAATCGAGCTTGCCTTTGCCGACCTTCGTCTTGCGCAACTTGTAGATCTCCTTGGAAGTTTTCATCAGCAGCTTCGCCAGCTGGCGCTCCTCGGGCGTGACCGCATTGACCGCCTTTACCAGCCGTAGGAAGTCCTCGTTCTCGAGCG CCAGGCTGCCACCTTGACGTCGTTGTTGTCGCGGGCCTGCTCGAGCCGGTGCTTCAGCT CCGCAGCCGCCCGATCTCGTCGGTGAGCGTTTCCAGCTTCGTCTGCTGGGCCTTCAGATCGAGCTCGAGATCGAGACTGGTGCGCGGCACTGC]
[-] EMBL BX609430             [                                                                                                                            TACGTGTGTGTGTCGGATCCTGTCAACCTCACACCTCCACACCGTACGTACGGTCAACGTCGTTGTACGAGAAAGAGGCAGCGCTTATATCCGATTCCGGATCTGTGCCGGTACCGATACTGGTCGTCGCCAACCGGTGTGCTGCCATTGTACCGTTGGTCGGCGTACGGCTGCCGCCACATTTGTCCCCATCCCGCTCTGAAGCGGACCGCATCAGTCCGATGGTGGCCTGCGTGGTAGACGACGGAAAAATTTCCGACGGCAGCTCCGGCACGGACACTCCACGACGCGTAAAGAATGCCATCTTTTCTTTGAACGAGATTGAATCGAGCTTGCCTTTGCCGACTTTCGTCTTGCGCAACTTGTAGATCTCCTTGGAAGTTTTCATCAGCAGCTTCGCCAGCTGGCGCTCCTCGGGCGTGACCGCATTGACCGCCTTTACCAGCCGTAGGAAGTCCTCGTTCTCGAGCGCCCAGGCTGCCACCTTGACGTCGTTGTTGTCGCGGGCCTGCTCGAGCCGGTGCTTCAGCTCCCGCAGCCGCCCGATCTCGTCGGTGAG                                                                  ]


>consensus_5000#0 CAGCTTTTATGATTAAATGCATGCAAGCCTTTGGTCACTCATTTTCACTTGTTTTTCATT TGCTTTCGGCTACGACGTTTAATTCTAGACCAACAACCCCTGTCTGTACACTTGTGTGTT TATGTACGTGTGTGTGTCGGATCCTGTCAACCTCACACCTCCACACCGTACGTACGGTCA ACGTCGTTGTACGAGAAAGAGGCAGCGCTTATATCCGATTCCGGATCTGTGCCGGTACCG ATACTGGTCGTCGCCAACCGGTGTGCTGCCATTGTACCGTTGGTCGGCGTACGGCTGCCG CCACATTTGTCCCCATCCCGCTCTGAAGCGGACCGCATCAGTCCGATGGTGGCCTGCGTG GTAGACGACGGAAAAATTTCCGACGGCAGCTCCGGCACGGACACTCCACGACGCGTAAAG AATGCCATCTTTTCTTTGAACGAGATTGAATCGAGCTTGCCTTTGCCGACCTTCGTCTTG CGCAACTTGTAGATCTCCTTGGAAGTTTTCATCAGCAGCTTCGCCAGCTGGCGCTCCTCG GGCGTGACCGCATTGACCGCCTTTACCAGCCGTAGGAAGTCCTCGTTCTCGAGCGCCCAG GCTGCCACCTTGACGTCGTTGTTGTCGCGGGCCTGCTCGAGCCGGTGCTTCAGCTCCGCA GCCGCCCGATCTCGTCGGTGAGCGTTTCCAGCTTCGTCTGCTGGGCCTTCAGATCGAGCT CGAGATCGAGACTGGTGCGCGGCACTGC



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)