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Anopheles gambiae
cluster # 5001 cluster # 5001       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5001#0 length = 1354 sequences # 4  

consensusID : consensus_5001#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1354
fasta sequence
                              [ACTGCCAGCGTGGGAACGTACCGCTACGTGGCCAGTTTCGTCGGTCCCATTCCGCGATGGCCTCCGCCCCCCCGATTGTGGTCATTCTCGGCTCGACCGGTACCGGCAAAACGAAGCTGTCTCTCGAGCTGGCAGCCCGGTACGGCGGCGAGGTGATCAGTGCCGATTCCATGCAGGTTTACACCGGACTCGACATCGTAACGGCCAAGGCGACGAAGGAGGAGCAGCGGCAGGCGGTGCACCACCTGCTGGATGTGGCTAGGCCCGATCAGGCCTTCACCGTGACCCATTTCCGCGAGCGCGCCCTGCCGATCATCGAATCGTTGCTGGCGGCCAACCGCATGCCGATCATCGTGGGCGGCACCAACTATTACATCGAGAGCATCCTCTGGCGGGTGCTGCTGAGCGAGGGCGTCAAGCGGGAACGGTTGCGATCGCGTTGCGCCACCGAAAGCGAACCGGAGGCAAAGCAACCGAAAGTGGACGGTGGAGTGGCTGCTGCTGCTGCTGCTTCTGCTGGAACTACCACTGACCTGGAGCGGCTTCTGGAGGCGCTACCGGGCCTGGGAACGAGTGAATCGCTCGAAGCGCACGAGTCGGAGTTGCTGCACCAGGCCCTGCAGCGGGTCGACCCGGAGTCAGCCGAGCGGCTGCATCCCAACAACAAGCGGAAGATTATACGGGCTCTCGAAGTGTACATAGAATCGG---GAGGACA-GTGCACNATGAGCCAGGAATTGGCGGAACAACGGTCA-GCGCCAGGTGCTTGCGGTTTAGGGGGTCCTCTGCGCTATCAGAACGTAGTCATCATCTGGCTACGATGCGATCAGGATATTCTAAACCGTCGTTTGGATGCGAGGGTGGACAGTATGGTTGCCCAAGGACTGCTGCCAGAGATACGAACA-TTTTATGAATCGTACGTCAAACCCTACGACGC-TTGCCAGTTCCATCAGGGCATACTACAAGCCATAGGCTTCAAGGAGTTCGTGAAGTATCTAGAAACGTACGGCCCGGAACAGGATCTCGAGATTCTAGATTACC-GTACTACGTGGCTGGAACATCCCCGCCCCAAG-CAACCGGTCTGAGCATGCTGGAGGATTGTCTCGACTACCTGAAACTGGTCACGCGTCGCTATGGCCGGCGTCAG-TCCAGTGGATCCGGAATCGATTCCTGTCCGATATTGGTCGCG-AGGTGGCA-CAATCTAC-GCACTAGACACGGGC-AATGTCGACAATTGGAAGGT-GCANGTATTCGATCC-GGCGTTAGC-CAT-CATCCGTGCCATCAAATTTGGACAGCCGTCCCCTGTGCCCTGTGTGCCAAAATAGCAACAGACCGCGAACGACTGCAAACGGAGCGTACA]

[+] EMBL BX625184             [ACTGCCAGCGTGGGAACGTACCGCTACGTGGCCAGTTTCGTCGGTCCCATTCCGCGATGGCCTCCGCCCCCCCGATTGTGGTCATTCTCGGCTCGACCGGTACCGGCAAAACGAAGCTGTCTCTCGAGCTGGCAGCCCGGTACGGCGGCGAGGTGATCAGTGCCGATTCCATGCAGGTTTACACCGGACTCGACATCGTAACGGCCAAGGCGACGAAGGAGGAGCAGCGGCAGGCGGTGCACCACCTGCTGGATGTGGCTAGGCCCGATCAGGCCTTCACCGTGACCCATTTCCGCGAGCGCGCCCTGCCGATCATCGAATCGTTGCTGGCGGCCAACCGCATGCCGATCATCGTGGGCGGCACCAACTATTACATCGAGAGCATCCTCTGGCGGGTGCTGCTGAGCGAGGGCGTCAAGCGGGAACGGTTGCGATCGCGTTGCGCCACCGAAAGCGAACCGGAGGCAAAGCAACCGAAAGTGGACGGTGGAGTGGCTGCTGCTGCTGCTGCTTCTGCTGGAACTACCACTGACCTGGAGCGGCTTCTGGAGGCGCTACCGGGCCTGGGAACGAGTGAATCGCTCGAAGCGCACGAGTCGGAGTTGCTGCACCAGGCCCTGCAGCGGGTCGACCCGGAGTCAGCCGAGCGGCTGCATCCCAACAACAAGCGGAAGATTATACGGGCTCTCGAAGTGTACATAGAATCGG   GAGGACA GTGCACNATGAGCCAGGAATTGGCGGAACAACGGTCA GCGCCAGGTGCTTGCGGGTTAGGGGGTCCTCTGCGCTATCAGAACGTAGTCATCATCTGGCTACGATGCGATCAGGATATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AL696980             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             agATCGGCCNGAGGTTANGTGCACAATGAGCCAGGAATTGGCGGAAC ACGGTCATGCGCCAGGTGCTTGCGGTTTAGGGGGTCCTCTGCGCTATCAGAACGTAGTCATCATCTGGCTACGATGCGATCAGGATATTCTAAACCGTCGTTTGGATGCGAGGGTGGACAGTATGGTTGCCCAAGGACTGCTGCCAGAGATACGAACA TTTTATGAATCGTACGTCAAACCCTACGACGC TTGCCAGTTCCATCAGGGCATACTACAAGCCATAGGCTTCAAGGAGTTCGTGAAGTATCTAGAAACGTACGG CCGGAACAGGATCTCGAGATTCTAGATTACC GTACTACGTGGCTGGAACATTCCCG CCCAAG CAACCGGTCTGAGCATGCTGGAGGATTGTCTCGACTACCTGAAACTGGTCACGCGTCGCTATGGCCGGCGTCAG TCCAGTGGATCCGGAATCGATTCCTGTCCGATATTGGTCGCGAAGGTGGCA CAATCTACGGCACTAGACACGGGCAAATGTCGACAATTGGAAGGTGGCANGTATTCGATCCGGGCGTTAGCGCATCCATCCG                                                                                    ]
[+] EMBL BX620398             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTTGCGGTTTAGGGGGTCCTCTGCGCTATCAGAACGTAGTCATCATCTGGCTACGATGCGATCAGGATATTCTAAACCGTCGTTTGGATGCGAGGGNGGACAGTATGGTTGCCCAAGGACTGCTGCCAGAGATACGAACA TTTTATGAATCGTACGTCAAACCCTACGACGC TTGCCAGTTCCATCAGGGCATACTACAAGCCATAGGCTTCAAGGAGTTCGTGAAGTATCTAGAAACGTACGGCCCGGAACAGGATCTCGAGATTCTAGATTACC GTACTACGTGGCTGGAACATCCCCGCCCCAAGCCAACCGGTCTGAGCATGCTGGAGGATTGTCTCGACTACCTGAAACTGGTCACGCGTCGCTATGCCCGCCGTCAGCTCCAGTGGATCCGCAATCGATTCCTGTCCGATATTGGTCGCG AGGTGCCACCAATCTAC GCACTAGACACGGGC AATGTCGACCATTGGAAGGT GCAGGTATCCGATCC GGCGTTAGC CAT CATCGATGCCATCAAATTTGGACAGCCGTCCCCTGTGCCCTGTGTGCCAAAATAGCAACAGACCGCGAACGACTGCAAACGGAGCGTACA]
[+] EMBL AGA283257            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATATTCTAAACCGTCGTTTGGATGCGAGGGTGGACAGTATGGTTGCCCAAGGACTGCTGCCAGAGATACGAACATTTTTATGAATCGTACGTCAAACCCTACGACGCTTTGCCAGTTCCATCAGGGCATACTACAAGCCATAGGCTTCAAGGAGTTCGTGAAGTATCTAGAAACGTACGGCCCGGAACAGGATCTCGAGATTCTAGATTACCGGTACTACGTGGCTGGAACATCCCCGCCCC                                                                                                                                                                                                                                                                                                         ]


>consensus_5001#0 ACTGCCAGCGTGGGAACGTACCGCTACGTGGCCAGTTTCGTCGGTCCCATTCCGCGATGG CCTCCGCCCCCCCGATTGTGGTCATTCTCGGCTCGACCGGTACCGGCAAAACGAAGCTGT CTCTCGAGCTGGCAGCCCGGTACGGCGGCGAGGTGATCAGTGCCGATTCCATGCAGGTTT ACACCGGACTCGACATCGTAACGGCCAAGGCGACGAAGGAGGAGCAGCGGCAGGCGGTGC ACCACCTGCTGGATGTGGCTAGGCCCGATCAGGCCTTCACCGTGACCCATTTCCGCGAGC GCGCCCTGCCGATCATCGAATCGTTGCTGGCGGCCAACCGCATGCCGATCATCGTGGGCG GCACCAACTATTACATCGAGAGCATCCTCTGGCGGGTGCTGCTGAGCGAGGGCGTCAAGC GGGAACGGTTGCGATCGCGTTGCGCCACCGAAAGCGAACCGGAGGCAAAGCAACCGAAAG TGGACGGTGGAGTGGCTGCTGCTGCTGCTGCTTCTGCTGGAACTACCACTGACCTGGAGC GGCTTCTGGAGGCGCTACCGGGCCTGGGAACGAGTGAATCGCTCGAAGCGCACGAGTCGG AGTTGCTGCACCAGGCCCTGCAGCGGGTCGACCCGGAGTCAGCCGAGCGGCTGCATCCCA ACAACAAGCGGAAGATTATACGGGCTCTCGAAGTGTACATAGAATCGGGAGGACAGTGCA CNATGAGCCAGGAATTGGCGGAACAACGGTCAGCGCCAGGTGCTTGCGGTTTAGGGGGTC CTCTGCGCTATCAGAACGTAGTCATCATCTGGCTACGATGCGATCAGGATATTCTAAACC GTCGTTTGGATGCGAGGGTGGACAGTATGGTTGCCCAAGGACTGCTGCCAGAGATACGAA CATTTTATGAATCGTACGTCAAACCCTACGACGCTTGCCAGTTCCATCAGGGCATACTAC AAGCCATAGGCTTCAAGGAGTTCGTGAAGTATCTAGAAACGTACGGCCCGGAACAGGATC TCGAGATTCTAGATTACCGTACTACGTGGCTGGAACATCCCCGCCCCAAGCAACCGGTCT GAGCATGCTGGAGGATTGTCTCGACTACCTGAAACTGGTCACGCGTCGCTATGGCCGGCG TCAGTCCAGTGGATCCGGAATCGATTCCTGTCCGATATTGGTCGCGAGGTGGCACAATCT ACGCACTAGACACGGGCAATGTCGACAATTGGAAGGTGCANGTATTCGATCCGGCGTTAG CCATCATCCGTGCCATCAAATTTGGACAGCCGTCCCCTGTGCCCTGTGTGCCAAAATAGC AACAGACCGCGAACGACTGCAAACGGAGCGTACA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)