Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 5081 cluster # 5081       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5081#0 length = 1075 sequences # 4  

consensusID : consensus_5081#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1075
fasta sequence
                              [GTGGAAATAGAACTGGGTCCATAATTGTTTTAATCAGCACAAAAATAAGCAACCCATCGGTAGCAAAACTAGGTTCTGCT-GGCGGCGCATTAGGTGCAACGATAAAAACGACGGGAACGTTATACAATATTCCTTCGTCCCCTGTGGCAATCAACGATGAAGGCGATAATCGCAAACAGTCGATGCTCTGCCAAGAAATAGCCAAACTGACTGGTGAAGAAGAGGGCAATGGTCAATCCGAGGCCCAATCCACCAGTAAAACCGCAACCATACTGGTTTCGAAGCACAAGACCAAGACCGGACTACCTTTGCTATTGAAAAAATCAAAAAAGTAACTATATTATCTCCACTCTGGCACGCTCTTACAAAAGCGGACGTATTCACACAAAAGCGGACAAATAACGAAAACTATAGAGGTACAAGATCGATTTCTGATTCGAAAAGCAGAACAGAACGGTAACAGTATTAGAGCATTTAGCTATTGTGTATTGCATCG-TAATGCTATTTTAAATTTTTGTTTTAAATTATTCGCCTATTTTTACACACTCACGACATAGACGCCATTTCAGTAATGTTGCTGGTCCACCAAGATTCTACGATACTCACCGATCACGCATCATGTCTCGAAACATGAATCGAGGTGAAACTTTGCCTGTTGAACAAACGGTCTCAAATCTCCAGTAATTACAAGGTACCAATCAACTATTTTTAAGCAAACAATGGCAGTACAATGC-TAAACTCTCTCTCAGTGCACGATTCTTAAGTATTATTGTACTTTAGCGAAACATGATTTTAACATTTTAATGATTGCTGATACCTTGTCATCACGCACAATTTTAATTTCGATAGCAATAGCAATTTCCTAAACACAAACATTCCGCAAACGAGCCATGATGATTGCCAATATTTTAGCGCATTTGCTGAACAACGTTTTAGTTTTCAACCGACACTGATAGACGTGAGAGAACAGTTGCGTGTTTTGCAAAGGAAACAGTATTTGAGGATAGAATATAATAGCAAAAATCGAATACGAATGCGACTACGAAATAGACAAGGAAATAGTAAAAAGGCTATA]

[+] EMBL CNS08I5J             [GTGGAAATAGAACTGGGTCCATAATTGTTTTAATCAGCACAAAAATAAGCAACCCATCGGTAGCAAAACTAGGTTCTGCT GGCGGCGCATTAGGTGCAACGATAAAAACGACGGGAACGTTATACAATATTCCTTCGTCCCCTGTGGCAATCAACGATGAAGGCGATAATCGCAAACAGTCGATGCTCTGCCAAGAAATAGCCAAACTGACTGGTGAAGAAGAGGGCAATGGTCAATCCGAGGCCCAATCCACCAGTAAAACCGCAACCATACTGGTTTCGAAGCACAAGACCAAGACCGGACTACCTTTGCTATTGAAAAAATCAAAAAAGTAACTATATTATCTCCACTCTGGCACGCTCTTACAAAAGCGGACGTATTCACACAAAAGCGGACAAATAACGAAAACTATAGAGGTACAAGATCGATTTCTGATTCGAAAAGCAGAACAGAACGGTAACAGTATTAGAGCATTTAGCTATTGTGTATTGCATCG TAATGCTATTTTAAATTTTTGTTTTAAATTATTCGCCTATTTTTACACACTCACGACATAGACGCCATTTCAGTAATGTTGCTGGTCCACCAAGATTCTACGATACTTTACGATCACGCATCATGTCTCGAAACATGAATCGAGGTGAAACTTTGCCTGTTGAACAAACGGTCTCAAATCTCCAGTAATTACAAGGTACCAATCAACTATTTTTAAGCAAACAATGGCAGTACAATGC TAAACTCTCTCTCAGTGCACGATTCTTAAGTATTATTGTACTTTAGCGAAACATGATTTTAACATTTTAATGATTGCTGATACCTTGTCATCACGCACAATTTTAATTTCGATAGCAATAGCAATTTCCTAAACACAAACATTCCGCAAACGAGCCATG                                                                                                                                                                                      ]
[+] EMBL CNS08R1M             [                     cAATTGTTTTAATCAGCACAAAAATAAGCAACCCATCGGTAGCAAAACTAGGTTCTGCTAGGCGGCGCATTAGGTGCAACGATAAAAACGACGGGAACGTTATACAATATTCCTTAATCCCCTGTGGCAATCAACGATGAAGGCGATAATCGCAAACAGTCGATGCTCTGCCAAGAAATAGCCAAACTGACTGGTGAAGAAGAGGGCAATGGTCAATCCGAGGCCCAATCCACCAGTAAAACCGCAACCATACTGGTTTCGAAGCACAAGACCAAGACCGGACTACCTTTGCTATTGAAAAAATCAAAAAAGTAACTATATTATCTCCACTCTGGCACGCTCTTACAAAAGCGGACGTATTCACACAAAAGCGGACAAATAACGAAAACTATAGAGGTACAAGATCGATTTCTGATTCGAAAAGCAGAACAGAACGGTAACAGTATTAGAGCATTTAGCTATTGTGTATTGCATCG TAATGCTATTTTAAATTTTTGTTTTAAATTATTCGCCTATTTTTACACACTCACGACATAGACGCCATTTCAGTAATGTTGCTGGTCCACCAAGATTCTACGATACTCACCGATCACGCATCATGTCTCGAAACATGAATAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CNS08I5K             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGTATTGCATCGTTAAAGCTATTTTAAATTTTTGTTTTAAATTATTCGCCTTTTTTTAAAAACTCACGACATAGACGCCATTTCAGTAATGTTGCTGGTCCACCAAGATTCTACGATACTCACCGATCACGCATCATGTCTCGAAACATGAATCGAGGTGAAACTTTGCCTGTTGAACAAACGGTCTCAAATCCCCAGTAATTACAAGGTACCAATCAACTTTTTTTAAGCAAACAATGGCAGTACAATGCTTAAACTCTCTCTCAGTGCACGATTCTTAAGTATTATTGTACTTTAGCGAAACATGATTTTAACATTTTAATGATTGCTGATACCTTGTCATAACGCACAATTTTAATTTCGATAGCAATAGCAATTTCCTAAAAACAAACATTCCGCAAACGAGCCATGATGATTGCCAATATTTTAGCGCATTTGCTGAACAACGTTTTAGTTTTCAACCGACACTGATAGACGTGAGAGAACAGTTGCGTGTTTTGCAAAGGAAACAGTATTTGAGGATAGAATATAATAGCAAAAATCGAATACGAATGCGACTACGAAATAGACAAGGAAATAGTAAAAAGGCTATA]
[+] EMBL CNS09ED3             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTG AACTTTGCCTGTTGAACAAACGGTCTCAAATCTCCAGTAATTACAAGGTACCAATCAACTATTTTTAAGCAAACAATGGCAGTACAATGC TAAACTCTCTCTCAGTGCACGATTCTTAAGTATTATTGTACTT                                                                                                                                                                                                                                                                                                          ]


>consensus_5081#0 GTGGAAATAGAACTGGGTCCATAATTGTTTTAATCAGCACAAAAATAAGCAACCCATCGG TAGCAAAACTAGGTTCTGCTGGCGGCGCATTAGGTGCAACGATAAAAACGACGGGAACGT TATACAATATTCCTTCGTCCCCTGTGGCAATCAACGATGAAGGCGATAATCGCAAACAGT CGATGCTCTGCCAAGAAATAGCCAAACTGACTGGTGAAGAAGAGGGCAATGGTCAATCCG AGGCCCAATCCACCAGTAAAACCGCAACCATACTGGTTTCGAAGCACAAGACCAAGACCG GACTACCTTTGCTATTGAAAAAATCAAAAAAGTAACTATATTATCTCCACTCTGGCACGC TCTTACAAAAGCGGACGTATTCACACAAAAGCGGACAAATAACGAAAACTATAGAGGTAC AAGATCGATTTCTGATTCGAAAAGCAGAACAGAACGGTAACAGTATTAGAGCATTTAGCT ATTGTGTATTGCATCGTAATGCTATTTTAAATTTTTGTTTTAAATTATTCGCCTATTTTT ACACACTCACGACATAGACGCCATTTCAGTAATGTTGCTGGTCCACCAAGATTCTACGAT ACTCACCGATCACGCATCATGTCTCGAAACATGAATCGAGGTGAAACTTTGCCTGTTGAA CAAACGGTCTCAAATCTCCAGTAATTACAAGGTACCAATCAACTATTTTTAAGCAAACAA TGGCAGTACAATGCTAAACTCTCTCTCAGTGCACGATTCTTAAGTATTATTGTACTTTAG CGAAACATGATTTTAACATTTTAATGATTGCTGATACCTTGTCATCACGCACAATTTTAA TTTCGATAGCAATAGCAATTTCCTAAACACAAACATTCCGCAAACGAGCCATGATGATTG CCAATATTTTAGCGCATTTGCTGAACAACGTTTTAGTTTTCAACCGACACTGATAGACGT GAGAGAACAGTTGCGTGTTTTGCAAAGGAAACAGTATTTGAGGATAGAATATAATAGCAA AAATCGAATACGAATGCGACTACGAAATAGACAAGGAAATAGTAAAAAGGCTATA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)