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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5082#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1276 fasta sequence
[CATCACCGAAAGTACGTACGCCACCACGATCCGTGACTCGAAACGATGCCGCGAGCGAGACTTTCTCAAAAAAGTGCACGAATGTGTGGCCAAGGGCGGAAAGGTTCTGATACCGGTGTTTGCCCTTGGACGTGCGCAAGAACTTTGCATACTGCTGGAAACGTACTGGGAGCGAATGAATCTGAAGTATCCCGTGTACTTTGCGGTGGGGTTGACGGAGAAGGCGAACAACTACTATAAGATGTTCATTACCTGGACGAATCAGAAAATTCGCAAAACGTTCGTGCAGCGCAATATGTTCGATTTCAAGCACATCAAACCGTTCGACAAAGGCTACATTGATAATCCCGGCGCGATGGTAGTG-TTCGCTACGCCGGGCATGCTGCACGCCGGATTGTCGCTGCAGATTTTCAAAAAGTGGGCACCGAACGAAAACAACATGGTCATCATGCCGGGCTACTGCGTGCAGGGTACGGTCGGGCACAAGATTCTTGGCGGCGCGAAGAAGGTGGAGTTCGAGAACCGACAGGTGGTGGATGTGAAGATGTCCGTCGAATACATGAGCTTCAGCGCTCACGCCGACGCCAAGGGTATTATGCAGCTGATACAGTTTTGCGAACCGCGCAACGTGATGCTCGTGCACGGCGAGGCGGTCAAGATGGAGTTTCTGAAGGAGAAAATTAGAGAGGAATTTAAAATCGAATGCTACACGCCGGCCAACGGGGAGACGTGCACCATCAGTACACCGATCAAAATACCGGTCGAGACGTCACTGTCGATCCTGAAGGATGAGGTGAAAAAGTACAATGCCCAGCCACCGGATCCGAAGCGGCGGCGCATCATACACGGAATTCTCGTGATGAAGGATAATAAAATTTCTCTCATGAGCATTGACGAGATTTTCAACGAGGCCGGCATTGATCGGCATGTGATAAGGTTCATCTCAAAGATAAAACTGGGCGATCCAGGACCGCCGATGCGCACGATCGAGAAGCTGTATAACATGCTGAACGAACGTCTTTCCGGCTGGACGGTGACGATGAATGATAACAACTCCATCAACGTAGAGTCAGTTAATATAAAAATCGAAACGGAAGAGCAACCCGCCGCCATCGGATCGGTTGGCCAGCCGAATGTGCCCGGTATGCACAAGATTTGCAATGTGAGCTGGGTTAACCAAGATGAGGATTTGGGTAGTTACATTCTTGGATTGCTGCAAAGCCTGTGAGCTATACGAATCAGTATGTCCGCCAGTGAACCGAAATAAAGGAAATAA]
[+] EMBL CNS09PQR [CATCACCGAAAGTACGTACGCCACCACGATCCGTGACTCGAAACGATGCCGCGAGCGAGACTTTCTCAAAAAAGTGCACGAATGTGTGGCCAAGGGCGGAAAGGTTCTGATACCGGTGTTTGCCCTTGGACGTGCGCAAGAACTTTGCATACTGCTGGAAACGTACTGGGAGCGAATGAATCTGAAGTATCCCGTGTACTTTGCGGTGGGGTTGACGGAGAAGGCGAACAACTACTATAAGATGTTCATTACCTGGACGAATCAGAAAATTCGCAAAACGTTCGTGCAGCGCAATATGTTCGATTTCAAGCACATCAAACCGTTCGACAAAGGCTACATTGATAATCCCGGCGCGATGGTAGTG TTCGCTACGCCGGGCATGCTGCACGCCGGATTGTCGCTGCAGATTTTCAAAAAGTGGGCACCGAACGAAAACAACATGGTCATCATGCCGGGCTACTGCGTGCAGGGTACGGTCGGGCACAAGATTCTTGGCGGCGCGAAGAAGGTGGAGTTCGAGAACCGACAGGTGGTGGATGTGAAGATGTCCGTCGAATACATGAGCTTCAGCGCTCACGCCGACGCCAAGGGTATTATGCAGCTGATACAGTTTTGCGAACCGCGCAACGTGATGCTCGTGCACGGCGAGGCGGTCAAGATGGAGTTTCTGAAGGAGAAAATTAGAGAGGAATTTAAAATCGAATGCTACACGCCGGCCAACGGGGAGACGTGCACCATCAGTACACCGATCAAAATACCGGTCGAGACGTCACTGTCGATCCTGAAGGATGAGGTGAAAAAGTACAATGCCCAGCCACCGGATCCGAAGCGGCGGCGCATCATACACGGAATTCTCGTGATGAAGGATAATAAAATTTCTCTCATGAGCATTGACGAGATTTTCAACGAGGCCGGCATTGATCGGCATGTGATAAGGTTCATCTCAAAGATAAAACTGGGCGATCCAGGACCGCCGATGCGCACGATCGAGAAGCTGTA ]
[-] EMBL CNS09PQS [ CACATCAAACCGTTCGACAAAGGCTACATTGATAATCCCGGCGCGATGGTAGTGTTTCG TACGCCGGGCATGCTGCACGCCGGATTGTCGCTGCAGATTTTCAAAAAGTGGGCACCGAACGAAAACAACATGGTCATCATGCCGGGCTACTGCGTGCAGGGTACGGTCGGGCACAAGATTCTTGGCGGCGCGAAGAAGGTGGAGTTCGAGAACCGACAGGTGGTGGATGTGAAGATGTCCGTCGAATACATGAGCTTCAGGGCTCACGCCGACGCCAAGGGTATTATGCAGCTGATACAGTTTTGCGAACCGCGCAACGTGATGCTCGTGCACGGCGAGGCGGTCAAGATGGAGTTTCTGAAGGAGAAAATTAGAGAGGAATTTAAAATCGAATGCTACACGCCGGCCAACGGGGAGACGTGCACCATCAGTACACCGATCAAAATACCGGTCGAGACGTTACTGTCGATCCTGAAGGATGAGGTGAAAAAGTACAATGCCCAGCCACCGGATCCGAAGCGGCGGCGCATCATACACGGAATTCTCGTGATGAAGGATAATAAAATTTTTCTCATGAGCATTGACGAGATTTTCAACGAGGCCGGCATTGATCGGCATGTGATAAGGTTCATCTCAAAGATAAAACTGGGCGATCCAGGACCGCCGATGCGCACGATCGAGAAGCTGTATAACATGCTGAACGAACGTCTTTCCGGCTGGACGGTGACGATGAATGATAACAACTCCATCAACGTAGAGTCAGTTAATATAAAAATCGAAACGGAAGAGCAACCCGCCGCCATCGGATCGGTTGGCCAGCCGAATGTGCCCGGTATGCACAAGATTTGCAATGTGAGCTGGGTTAACCAAGATGAGGATTTGGGTAGTTACATTCTTGGATTGCTGCAAAGCCTGTGAGCTATACGAATCAGTATGTCCGCCAGTGAACCGAAATAAAGGAAATAA]
[+] EMBL BX613203 [ AAAGGCTACATTGATAATCCCGGCGCGATGGTGGTG TTCGCTACGCCGGGCATGCTGCACGCCGGACTGTCGCTGCAGATTTTCAAAAAGTGGGCACCGAACGAAAACAACATGGTCATCATGCCGGGCTACTGCGTGCAGGGTACGGTCGGGCACAAGATTCTTGGCGGCGCGAAGAAGGTGGAGTTCGAGAACCGACAGGTGGTGGATGTGAAGATGTCCGTCGAATACATGAGCTTCAGCGCTCACGCCGACGCGAAGGGTATTATGCAGCTGATACAGTTTTGCGAACCGCGCAACGTGATGCTCGTGCACGGCGAGGCGGTCAAGATGGAGTTTCTGAAGGAGAAAATTAGAGAGGAATTTAAAATCGAATGCTACACGCCGGCCAACGGGGAGACGTGCACCATCAGTACACCGATCAAAATACCGGTCGAGACGTCACTGTCGATCCTGAAGGATGAGGTGAAAAAGTACAATGCCCAGCCACCGGATCCGAAGCGGCGGCGCATCATACACGGAATTCTCGTGATGAAGGATAATAAAATTTCTCTCATGAGCATTGACGAGATTTTCAACGAGGCCGGCATTGATCGGCATGTGATAAGGTTCATCTCAAAGATAAAACTGGACGATCCAGGACCGCCGATGCGCACGATCGAGAAGCTGTACAACATGCTGAACGAACGTCTTTCCGGCTGGACGGTGA ]
consensusID : consensus_5082#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 764 fasta sequence
[CAGCAGATCCCCCCGGTATAATGTAACGGACTGCTCATCACGAAAGTACGTACGCCACCACGATCCGTGACTCGAAACGATGCCGCGAGCGGGACTTTCTACAAAAAAGTGCACGAATGTAGTAGGCCAAAGGCGGAAAGGTTCTGATACCGGTGTTTGCCCTATGGACTGTGCGCAAGAACTATATGCATACTGCTGGAAACGTACTGGGCAGCGAATGAATTTNGAAGTATCCCGTGTACTTATGCGGTGGTGTATACTTGGCGATTACAACTATGACGCCAGATCGGCACCTTGGCGCGAAGAAGGTGGCAGTATCGAGAACCGACAGGTGGTGGATGTGAAGATGTCCGTCGCAATACATGAGCTTCAGCGCTCACGCCGACGCGAAGGGTATTATGCAGCTGATACAGTTTAAGCGAACCGCGCAACGTAGATGCTCGTGCACGGCGAGGCGGTCAAGATGGAGTTTCTGAACGGAGAAAATTANAGAGGAATTTAANATCGAATGCTACACCGTCGGCCAACGGGGAGACGTGCACCATCAGTACACCGATCAAAGAATTACCCGGTCGAGAACGTAACCTGGTCCGAANACCTTGAACGTGATTGACGGTGACAACACAGTACAAATTGCACCAGCCANCACGGGACTACCGGAAACGGGACGNGCCGCCATCAATACCACGGAANATTCTACGTGAATCAAGGGATAATACCCATATCTCTCNATGACGCACTTTGCACGNAGAATATNACAAAGA]
[+] EMBL AL692301 [CAGCAGATCCCCCCGGTATAATGTAACGGACTGCTCATCACGAAAGTACGTACGCCACCACGATCCGTGACTCGAAACGATGCCGCGAGCGGGACTTTCTACAAAAAAGTGCACGAATGTAGTAGGCCAAAGGCGGAAAGGTTCTGATACCGGTGTTTGCCCTATGGACTGTGCGCAAGAACTATATGCATACTGCTGGAAACGTACTGGGCAGCGAATGAATTTNGAAGTATCCCGTGTACTTATGCGGTGGTGTATACTTGGCGATTACAACTATGACGCCAGATCGGCACCTTGGCGCGAAGAAGGTGGCAGTATCGAGAACCGACAGGTGGTGGATGTGAAGATGTCCGTCGCAATACATGAGCTTCAGCGCTCACGCCGACGCGAAGGGTATTATGCAGCTGATACAGTTTAAGCGAACCGCGCAACGTAGATGCTCGTGCACGGCGAGGCGGTCAAGATGGAGTTTCTGAACGGAGAAAATTANAGAGGAATTTAANATCGAATGCTACACCGTCGGCCAACGGGGAGACGTGCACCATCAGTACACCGATCAAAGAATTACCCGGTCGAGAACGTAACCTGGTCCGAANACCTTGAACGTGATTGACGGTGACAACACAGTACAAATTGCACCAGCCANCACGGGACTACCGGAAACGGGACGNGCCGCCATCAATACCACGGAANATTCTACGTGAATCAAGGGATAATACCCATATCTCTCNATGACGCACTTTGCACGNAGAATATNACAAAGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5082#0 CATCACCGAAAGTACGTACGCCACCACGATCCGTGACTCGAAACGATGCCGCGAGCGAGA 60
consensus_5082#1 ------------------------------------------------------------
consensus_5082#0 CTTTCTCAAAAAAGTGCACGAATGTGTGGCCAAGGGCGGAAAGGTTCTGATACCGGTGTT 120
consensus_5082#1 ------------------------------------------------------------
consensus_5082#0 TGCCCTTGGACGTGCGCAAGAACTTTGCATACTGCTGGAAACGTACTGGGAGCGAATGAA 180
consensus_5082#1 ----------------------------------------------------------CA 2
*
consensus_5082#0 TCTGAAGTATCCCGTGTACTTTGCGGTGGGGTTGACGGAGAAGGCGAACA-ACTACTATA 239
consensus_5082#1 GCAGATCCCCCCGGTATAATGTAACGGACTGCTCATCACGAAAGTACGTACGCCACCACG 62
* ** ** ** ** * * * * * * *** * * * ** *
consensus_5082#0 AGATGTTCATTACCTGGACGAATCAGAAAATTCGCAAAACGTTCGTGCAGCGCAATATGT 299
consensus_5082#1 A----TCCGTGACTCGAAACGATGCCGCGA---GCGGGACTTTC-TACAA--AAAAGTGC 112
* * * * ** * * ** * ** ** *** * ** ** **
consensus_5082#0 TCGATTTCAAGCACATCAAACCGTTCGACAAAGGCTACATTGATAATCCCGGCGCGATGG 359
consensus_5082#1 ACGAATGTA-GTAGGCCAAAG---GCGG-AAAGGTTCTGATACCGGTGTTTGCCCTATGG 167
*** * * * * **** ** ***** * * * ** * ****
consensus_5082#0 TAGTGTTCGCTACGCCGGGCATGCTGCACGCCGGATTGTCGCTGCAGATTTTCAAAAAGT 419
consensus_5082#1 -ACTGTGCGCAAGAACTA-TATGCATACTGCTGGAAACGTACTGGG------CAGCGAAT 219
* *** *** * * **** ** *** *** ** * *
consensus_5082#0 GGGCACCGAACGAAAACAACATGGTCATCATGCCGGGCTACTGCGTGCAGGGTACGGTCG 479
consensus_5082#1 GAATTTNGAA-GTATCCCGTGTACTTAT-GCGGTGGTGTA-TACTTGGCGATTACAACTA 276
* *** * * * * * ** * ** ** * * ** * ***
consensus_5082#0 -GGCACAAGATTCTTGGC--GGCGCGAAGAAGGTGG-AGT-TCGAGAACCGACAGGTGGT 534
consensus_5082#1 TGACGCCAGATCGGCACCTTGGCGCGAAGAAGGTGGCAGTATCGAGAACCGACAGGTGGT 336
* * * **** * **************** *** *******************
consensus_5082#0 GGATGTGAAGATGTCCGTCG-AATACATGAGCTTCAGCGCTCACGCCGACGCCAAGGGTA 593
consensus_5082#1 GGATGTGAAGATGTCCGTCGCAATACATGAGCTTCAGCGCTCACGCCGACGCGAAGGGTA 396
******************** ******************************* *******
consensus_5082#0 TTATGCAGCTGATACAGTTTT-GCGAACCGCGCAACGT-GATGCTCGTGCACGGCGAGGC 651
consensus_5082#1 TTATGCAGCTGATACAGTTTAAGCGAACCGCGCAACGTAGATGCTCGTGCACGGCGAGGC 456
******************** **************** *********************
consensus_5082#0 GGTCAAGATGGAGTTTCTGAA-GGAGAAAATTAGAGAGGAATTTAAAATCGAATGCTACA 710
consensus_5082#1 GGTCAAGATGGAGTTTCTGAACGGAGAAAATTANAGAGGAATTTAANATCGAATGCTACA 516
********************* *********** ************ *************
consensus_5082#0 C-GCCGGCCAACGGGGAGACGTGCACCATCAGTACACCGATCAAAATA----CCGGTCGA 765
consensus_5082#1 CCGTCGGCCAACGGGGAGACGTGCACCATCAGTACACCGATCAAAGAATTACCCGGTCGA 576
* * ***************************************** * ********
consensus_5082#0 GA-CGTCACTG---TCGATCCTGAAGGATGAGGTGAAAAAGTACAATGCCCAGCCACCGG 821
consensus_5082#1 GAACGTAACCTGGTCCGAANACCTTGAACGTGATTGACGGTGACAACACAGTACAAATTG 636
** *** ** *** * * * * * * **** * * * *
consensus_5082#0 ATCCGA--AGCGGCGGCGCATCATACACGGAATTC-TCGTGATGAAGGATAATAAAATTT 878
consensus_5082#1 CACCAGCCANCACGGGACTACCGGAAACGGGACGNGCCGCCATCAATACCACGGAANATT 696
** * * ** * * * **** * ** ** ** * ** **
consensus_5082#0 CTCTCATGAGCATTGACGAGATTTTCAACGAGGCCGGCATTGATCGGCATGTGATAAGGT 938
consensus_5082#1 CT---ACGTGAATCAA-GGGATAATACCCATATCTCTCNATGACGCACTTTGCACGNAGA 752
** * * * ** * * *** * * * * *** * * * *
consensus_5082#0 TCATCTCAAAGATAAAACTGGGCGATCCAGGACCGCCGATGCGCACGATCGAGAAGCTGT 998
consensus_5082#1 ATATNACAAAGA------------------------------------------------ 764
** ******
consensus_5082#0 ATAACATGCTGAACGAACGTCTTTCCGGCTGGACGGTGACGATGAATGATAACAACTCCA 1058
consensus_5082#1 ------------------------------------------------------------
consensus_5082#0 TCAACGTAGAGTCAGTTAATATAAAAATCGAAACGGAAGAGCAACCCGCCGCCATCGGAT 1118
consensus_5082#1 ------------------------------------------------------------
consensus_5082#0 CGGTTGGCCAGCCGAATGTGCCCGGTATGCACAAGATTTGCAATGTGAGCTGGGTTAACC 1178
consensus_5082#1 ------------------------------------------------------------
consensus_5082#0 AAGATGAGGATTTGGGTAGTTACATTCTTGGATTGCTGCAAAGCCTGTGAGCTATACGAA 1238
consensus_5082#1 ------------------------------------------------------------
consensus_5082#0 TCAGTATGTCCGCCAGTGAACCGAAATAAAGGAAATAA 1276
consensus_5082#1 --------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||