cluster # 5159

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Anopheles gambiae
cluster # 5159 cluster # 5159 Sequences # 4 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5159#0 length = 930 sequences # 2

consensus_5159#1 length = 869 sequences # 2

consensusID : consensus_5159#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 930
fasta sequence

                              [CCGGGCCTACCGCTCGAAAAGGACGTATCCCGTTGGCCTTACAAGCTGCGCGCTACCGACTCCGGCAATCTTACCGTCACGGAAAAGGTGGACATACAGGTGCAGCAGCACAAATCGCACCGCAGCCTCAACCACGAGATCAGCCTGGCGCTGCGCCTGAACCGCAAGTTTGCCAGCAACGTCGACTGGCACATCGAGACGGCACGCGGCATCTCGGTCGTGCTCGGTGACGTGACGCTGTCGAACATTATCGTGCGCGACATCCGCAACAGCATACAGGATCCCAGCCTGGCCACGTTTGTGTACACGAACGAGACGCTGCCGAAGGATCGCTGCCCGGAGGAGAAGCTGGACGAGCTGGTGGCGCTGCTCACCGAGGAAGCGCTCAACGATGCGCTCAATCCGGACATTACGGTAAAGTCGGTGCAGGGCCAACAGATTGCACAGTGCACCAAGGTCACGCCGCCAAAGGTGAAACCGACGCAGAGCATTCAGCGCAACTATGCGCCGCAAACGCGCAACCAGGTCGATCAGGTGAACGCAACCGTGGGCCATCTGCTCGTCTTCAAGGTGCCGGTGGACACATTCTACGATCCAGAAGATGGTAACGAGCTGAAGATGAAGCTGCTGACAACCGATCGCAACACGCTCGATCCCAACCACTGGCTACAGTTTGACTCGAAGAACCAGGAGTTTTACGGTGTGCCGCGAACGAATGACATCGGACGCAAGGAATATCTTTTGATGGCGGAAGATCGCGAAGGTCTCACAGCAACGGACGCACTGGTGGTGGTAGTCAACCCGCACCACAAGCGCGACTACAGCGTCCTGTTCGAGCTGACGCTCGACATTAGCCACGAGCAGTTTAACACGGCCCAGGTGCAGCGGCGCTTTATCGAACGGCTCGCGCAGGTGTTTGGCGACGCCTCG]

[+] EMBL BM635214             [CCGGGCCTACCGCTCGAAAAGGACGTATCCCGTTGGCCTTACAAGCTGCGCGCTACCGACTCCGGCAATCTTACCGTCACGGAAAAGGTGGACATACAGGTGCAGCAGCACAAATCGCACCGCAGCCTCAACCACGAGATCAGCCTGGCGCTGCGCCTGAACCGCAAGTTTGCCAGCAACGTCGACTGGCACATCGAGACGGCACGCGGCATCTCGGTCGTGCTCGGTGACGTGACGCTGTCGAACATTATCGTGCGCGACATCCGCAACAGCATACAGGATCCCAGCCTGGCCACGTTTGTGTACACGAACGAGACGCTGCCGAAGGATCGCTGCCCGGAGGAGAAGCTGGACGAGCTGGTGGCGCTGCTCACCGAGGAAGCGCTCAACGATGCGCTCAATCCGGACATTACGGTAAAGTCGGTGCAGGGCCAACAGATTGCACAGTGCACCAAGGTCACGCCGCCAAAGGTGAAACCGACGCAGAGCATTCAGCGCAACTATGCGCCGCAAACGCGCAACCAGGTCGATCAGGTGAACGCAACCGTGGGCCATCTGCTCGTCTTCAAGGTGCCGGTGGACACATTCTACGATCCAGAAGATGGTAACGAGCTGAA                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM602553             [                                                                                                                                                                                                                                 ccgGACGTGACGCTGTCGAACATTATCGTGCGCGACATCCGCAACAGCATACAGGATCCCAGCCTGGCCACGTTTGTGTACACGAACGAGACGCTGCCGAAGGATCGCTGCCCGGAGGAGAAGCTGGACGAGCTGGTGGCGCTGCTCACCGAGGAAGCGCTCAACGATGCGCTCAATCCGGACATTACGGTAAAGTCGGTGCAGGGCCAACAGATTGCACAGTGCACCAAGGTCACGCCGCCAAAGGTGAAACCGACGCAGAGCATTCAGCGCAACTATGCGCCGCAAACGCGCAACCAGGTCGATCAGGTGAACGCAACCGTGGGCCATCTGCTCGTCTTCAAGGTGCCGGTGGACACATTCTACGATCCAGAAGATGGTAACGAGTTGAAGATGAAGCTGCTGACAACCGATCGCAACACGCTCGATCCCAACCACTGGCTACAGTTTGACTCGAAGAACCAGGAGTTTTACGGTGTGCCGCGAACGAATGACATCGGACGCAAGGAATATCTTTTGATGGCGGAAGATCGCGAAGGTCTCACAGCAACGGACGCACTGGTGGTGGTAGTCAACCCGCACCACAAGCGCGACTACAGCGTCCTGTTCGAGCTGACGCTCGACATTAGCCACGAGCAGTTTAACACGGCCCAGGTGCAGCGGCGCTTTATCGAACGGCTCGCGCAGGTGTTTGGCGACGCCTCG]




>consensus_5159#0
CCGGGCCTACCGCTCGAAAAGGACGTATCCCGTTGGCCTTACAAGCTGCGCGCTACCGAC
TCCGGCAATCTTACCGTCACGGAAAAGGTGGACATACAGGTGCAGCAGCACAAATCGCAC
CGCAGCCTCAACCACGAGATCAGCCTGGCGCTGCGCCTGAACCGCAAGTTTGCCAGCAAC
GTCGACTGGCACATCGAGACGGCACGCGGCATCTCGGTCGTGCTCGGTGACGTGACGCTG
TCGAACATTATCGTGCGCGACATCCGCAACAGCATACAGGATCCCAGCCTGGCCACGTTT
GTGTACACGAACGAGACGCTGCCGAAGGATCGCTGCCCGGAGGAGAAGCTGGACGAGCTG
GTGGCGCTGCTCACCGAGGAAGCGCTCAACGATGCGCTCAATCCGGACATTACGGTAAAG
TCGGTGCAGGGCCAACAGATTGCACAGTGCACCAAGGTCACGCCGCCAAAGGTGAAACCG
ACGCAGAGCATTCAGCGCAACTATGCGCCGCAAACGCGCAACCAGGTCGATCAGGTGAAC
GCAACCGTGGGCCATCTGCTCGTCTTCAAGGTGCCGGTGGACACATTCTACGATCCAGAA
GATGGTAACGAGCTGAAGATGAAGCTGCTGACAACCGATCGCAACACGCTCGATCCCAAC
CACTGGCTACAGTTTGACTCGAAGAACCAGGAGTTTTACGGTGTGCCGCGAACGAATGAC
ATCGGACGCAAGGAATATCTTTTGATGGCGGAAGATCGCGAAGGTCTCACAGCAACGGAC
GCACTGGTGGTGGTAGTCAACCCGCACCACAAGCGCGACTACAGCGTCCTGTTCGAGCTG
ACGCTCGACATTAGCCACGAGCAGTTTAACACGGCCCAGGTGCAGCGGCGCTTTATCGAA
CGGCTCGCGCAGGTGTTTGGCGACGCCTCG

consensusID : consensus_5159#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 869
fasta sequence

                              [GGCAGAATCGGCACTGAGGTCGGACGCAAGGAATATCTTTTGATGGCGGAAGATCGCGAAGGTCTCACAGCAACGGACGCACTGGTGGTGGTAGTCAACCCGCACCACAAGCGCGACTACAGCGTCCTGTTCGAGCTGACGCTCGACATTAGCCACGAGCAGTTTAACACGGCCCAGGTGCAGCGGCGCTTTATCGAACGGCTCGCGCAGGTGTTTGGCGACGCCTCGACGCACTACATCAAGATCCACCACATTCGACCGATCCACCATACCGGGCAGGTGCAGGTGTCCTTCTTCAACACGACGCTGAGCCGCCAGCACCAGCGCTGCCCGCAGGAGGAGATCGAGACGCTGCGCAACATTCTGCTCCACCAGGACAGCACGATCCGGGCGAAGGTGCGCGAAATATTGGGCCAAGAGTTTAGCCTGCAGAACGTGAGCCTGGTGCCGCTGGATAACTGCACGGGTTCGATACGCCGCATCACGCCACGAGCGAGCCGGAGAAGGCCGGCCCGAAACCGATCTCGAAGGGACGAGTACCTGCTCACGTTCGTGCTGCCGTACGGTGATCATCATCGTGATGCTGCTGGATCCGNCCGGCAGTCATTGCGTGCCATTCTGTAACAAGCGCCCGGCTTGACCGGGCAAGAATGGAGCTTCCGGGTAACTTGACGNAAGAGCCGCAAAGTCGGTTCCCGGNTCGAAAGGGGGCAAGGTGATCTTCCAGGACAGAGCTGGACGAGAAGCCCGGGAGATCGGCAACAAAGTCGCCGGTGATACTGAAGGACGAGAAGCCCCGCTATTGCACCGTCCTACAGCAGTACAACCACGATGGCGATAACGAGGACGTCGATGAGTACGTGCCACGC]

[+] EMBL BX468293             [GGCAGAATCGGCACTGAGGTCGGACGCAAGGAATATCTTTTGATGGCGGAAGATCGCGAAGGTCTCACAGCAACGGACGCACTGGTGGTGGTAGTCAACCCGCACCACAAGCGCGACTACAGCGTCCTGTTCGAGCTGACGCTCGACATTAGCCACGAGCAGTTTAACACGGCCCAGGTGCAGCGGCGCTTTATCGAACGGCTCGCGCAGGTGTTTGGCGACGCCTCGACGCACTACATCAAGATCCACCACATTCGACCGATCCACCATACCGGGCAGGTGCAGGTGTCCTTCTTCAACACGACGCTGAGCCGCCAGCACCAGCGCTGCCCGCAGGAGGAGATCGAGACGCTGCGCAACATTCTGCTCCACCAGGACAGCACGATCCGGGCGAAGGTGCGCGAAATATTGGGCCAAGAGTTTAGCCTGCAGAACGTGAGCCTGGTGCCGCTGGATAACTGCACGGGTTCGATACGCCGCATCACGCCACGAGCGAGCCGGAGAAGGCCGGCCCGAAACCGATCTCGAAGGGACGAGTACCTGCTCACGTTCGTGCTGCCGTACGGTGATCATCATCGTGATGCTGCTGGATCCGNCCGGCAGTCATTGCGTGCCATTCTGTAACAAGCGCCCGGCTTGACCGGGCAAGAATGGAGCTTCCGGGTAACTTGACGNAAGAGCCGCAAAGTCGGTTCCCGGNTCGAAAGGGGGCAA                                                                                                                                                           ]
[+] EMBL AL694412             [                                                                                                                                   CGAGGTTAAGCTCGACATTAGCCACGAGCAGTTT ACACGGCCCAGGTGCAGCGGCGCTTTATCGAACGGCTCGCGCAGGTGTTTGGCGACGCCTCGACGCACTACATCAAGATCCACCACATTCGACCGATCCACCATACCGGGCAGGTGCAGGTGTCCTTCTTCAACACGACGCTGAGCCGCCAGCACCAGCGCTGCCCGCAGGAGGAGATCGAGACGCTGCGCAACATTCTGCTCCACCAGGACAGCACGATCCGGGCGAAGGTGCGCGAAATATTGGGCCAAGAGTTTAGCCTGCAGAACGTGAGCCTGGTGCCGCTGGATAACTGCACGGGTTCGATACGCCGCATCACGCCACGAGCGAGCCGGAGAAGGCC GCCCGAAACCGATCTCGAA GGACGACTACCTGCTCACGTTCGTGCTGCCGT CGGTGATCATCATCGTGATGCTGCT GAT CG CCGCCA TCATTGCGTG CATTCTGT ACAAGCG CCGGC TGACC GGCAAG ATGGAGCT  C GGT AC TGACG AAGAG CGC AAGTC GTT CCGG TCGAAGGGCATCCCGGTGATCTTCCAGGACAGAGCTGGACGAGAAGCCCGGGAGATCGGCAACAAAGTCGCCGGTGATACTGAAGGACGAGAAGCCCCGCTATTGCACCGTCCTACAGCAGTACAACCACGATGGCGATAACGAGGACGTCGATGAGTACGTGCCACGC]




>consensus_5159#1
GGCAGAATCGGCACTGAGGTCGGACGCAAGGAATATCTTTTGATGGCGGAAGATCGCGAA
GGTCTCACAGCAACGGACGCACTGGTGGTGGTAGTCAACCCGCACCACAAGCGCGACTAC
AGCGTCCTGTTCGAGCTGACGCTCGACATTAGCCACGAGCAGTTTAACACGGCCCAGGTG
CAGCGGCGCTTTATCGAACGGCTCGCGCAGGTGTTTGGCGACGCCTCGACGCACTACATC
AAGATCCACCACATTCGACCGATCCACCATACCGGGCAGGTGCAGGTGTCCTTCTTCAAC
ACGACGCTGAGCCGCCAGCACCAGCGCTGCCCGCAGGAGGAGATCGAGACGCTGCGCAAC
ATTCTGCTCCACCAGGACAGCACGATCCGGGCGAAGGTGCGCGAAATATTGGGCCAAGAG
TTTAGCCTGCAGAACGTGAGCCTGGTGCCGCTGGATAACTGCACGGGTTCGATACGCCGC
ATCACGCCACGAGCGAGCCGGAGAAGGCCGGCCCGAAACCGATCTCGAAGGGACGAGTAC
CTGCTCACGTTCGTGCTGCCGTACGGTGATCATCATCGTGATGCTGCTGGATCCGNCCGG
CAGTCATTGCGTGCCATTCTGTAACAAGCGCCCGGCTTGACCGGGCAAGAATGGAGCTTC
CGGGTAACTTGACGNAAGAGCCGCAAAGTCGGTTCCCGGNTCGAAAGGGGGCAAGGTGAT
CTTCCAGGACAGAGCTGGACGAGAAGCCCGGGAGATCGGCAACAAAGTCGCCGGTGATAC
TGAAGGACGAGAAGCCCCGCTATTGCACCGTCCTACAGCAGTACAACCACGATGGCGATA
ACGAGGACGTCGATGAGTACGTGCCACGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5159#0      CCGGGCCTACCGCTCGAAAAGGACGTATCCCGTTGGCCTTACAAGCTGCGCGCTACCGAC 60
consensus_5159#1      ---GGCAGAA---TCGGCACTGAGGTCGGACGCAAGGAATATCTTTTGATGGCGGAAGAT 54
                         ***  *    ***  *  ** **    **   *   **     **   **    ** 

consensus_5159#0      TCCGGCAATCTTACCGTCACGGAAAAGGTGGACATACAGGTGCAGCAGCACAAATCGCAC 120
consensus_5159#1      CGCGAAGGTCTCACAGCAACGGACGCACTGGTGGTGGTAGTCAACCCGCACCA---CAAG 111
                        **    *** ** *  *****     ***   *    **  * * **** *     * 

consensus_5159#0      CGCAGCCTCAACCACGAGATCAGCCTGGCGCTGCGCCTGAACCGCAAGTTTGCCAGCAAC 180
consensus_5159#1      CGCGACTACAGCGTCCTGTTCGAGCTGACGCTCGACATTAGCCACGAGCAGTTTAACACG 171
                      ***  *  ** *  *  * **   *** ****   * * * ** * **      * **  

consensus_5159#0      GTCGACTGGCACATCGAGACGGCACGCGGCATCTCGGTC--GTGCTCGGTGACGTGACGC 238
consensus_5159#1      GCCCA--GGTGCAGCGGCGCTTTATCGAACGGCTCGCGCAGGTGTTTGGCGACGCCTCGA 229
                      * * *  **  ** **   *   *     *  ****  *  *** * ** ****   ** 

consensus_5159#0      TGTCGAACATTATCGTGCGCGACATCCGCAACAGCATACAGGATCCCAGCCTGGCCACGT 298
consensus_5159#1      CGCACTACATCAAGATCCACCACATTCG--ACCG-ATCCACCATACCGGGCAGGT---GC 283
                       *    **** *   * * * **** **  ** * ** **  ** ** * * **    * 

consensus_5159#0      TTGTGTACACGAACGAGACGCTGCCGAAGGATCGCTGCCCGGAGGAGAAGCTGGACGAGC 358
consensus_5159#1      AGGTGTCCTTCTTCAACACGACGCTGAGCCGCCAGCACCAGCGCTGCCCGCAGGAGGAGA 343
                        **** *     * * ***  ** **     *    ** *        ** *** *** 

consensus_5159#0      TGGTGGCGCTGCTCACCGAGGAAGCGCTCAACGATGCGCTCAATCCGGACATTACGGTAA 418
consensus_5159#1      TCGAGACGCTGCGCAACATTCTGCTCCACCAGGACA-GCACGATCCGGGCG--AAGGTGC 400
                      * * * ****** ** *         * * * **   ** * ****** *   * ***  

consensus_5159#0      AGTCGGTGCAGGGCCAACAGATTGCACAGTGCACCAAGGTCACGCCGCCAAAGGTGAAAC 478
consensus_5159#1      GCGAAATATTGGGCCAAGAGTTTAGCCTGCAGAACGTGAGCCTGGTGCCGCTGG--ATAA 458
                            *   ******* ** **   * *   * *  *  *  *  ***   **  * * 

consensus_5159#0      CGACGCAGAGCATTCAGCGCAACTATGCGCCGCAAACGCGCAACCAGGTCGATCAGGTGA 538
consensus_5159#1      CTGCACGGG---TTCG--------ATACGCCGCAT-CACGCCACGAG--CGAGCCGGAGA 504
                      *  * * *    ***         ** *******  * *** ** **  *** * ** **

consensus_5159#0      ACGCAACCGTGGGCCATCTGCTCGTCTTCAAGGTGCCGGTGGACACATTC-TACGATCCA 597
consensus_5159#1      AGGCC------GGCCCGAAACCGATCTCGAAGGGACGAGTACCTGCTCACGTTCGTGCTG 558
                      * **       ****     *   ***  ****  *  **     *   * * **  *  

consensus_5159#0      GAAGATGGTAACGAGCTGAAGATGAAGCTGCTGACAACCGATCGCAACACGCTCGATCCC 657
consensus_5159#1      CCGTACGGTGATCATC--ATCGTGATGCTGCTGG-ATCCGNCCGGCAGTCATTGCGTGCC 615
                          * *** *  * *  *   *** *******  * ***  **  *  *  *   * **

consensus_5159#0      AACCACTGGCTACAGTTTGACTCGAAGAACCAGGAGTTTTACGGTGTGCCGCGAACGAAT 717
consensus_5159#1      ATTCTGTAACAAGCGCCCGGCTTGACCGGGCAAGAAT---GGAGCTTCCGGGTAACTTGA 672
                      *  *  *  * *  *   * ** **     ** ** *      *  * * *  ***    

consensus_5159#0      GACATCGGACGCAAGGAATATCTTTTGATGGCGGAAGATCGCGAAGGTCTCACAGCAACG 777
consensus_5159#1      CGNAAGAGCCGCAAAGTCGGTTCCCGGNTCGAAAGGGGGCAAGGTGATCTTCCAGGACAG 732
                         *   * ***** *    *     * * *     *  *  *  * ***  *** *  *

consensus_5159#0      GACGCACTGGTGGTGGTAGTCAACCCGCACCACAAGCGCGACTACAGCGTCCTGTTCGAG 837
consensus_5159#1      AGCTGGACGAGAAGCCCGGGAGATCGGCAACAAAGTCGCCGGTG----ATACTGAAGGAC 788
                        *     *         *   * * *** ** *  ***   *      * ***   ** 

consensus_5159#0      CTGACGCTCGACATTAGCCACGAGCAGTTTAACACGGCCCAGGTGCAGCGGCGCTTTATC 897
consensus_5159#1      GAGAAGCCCCGCTATTGC----ACCGTCCTACAGCAGTACAACCACGATGGCGAT--AAC 842
                        ** ** *  *  * **    * *    **   * *  **    *   **** *  * *

consensus_5159#0      GAACGGCTCGCGCAGGTGTTTGGCGACGCCTCG 930
consensus_5159#1      GAGGACGTCG-ATGAGTACGTG-CCACGC---- 869
                      **     ***     **   ** * ****