cluster # 5177

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 5177 cluster # 5177 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5177#0 length = 1023 sequences # 4
consensusID : consensus_5177#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1023
fasta sequence
                              [TAAACAACACGCTCGCTCACGTTAAACTCAGTAAAAAG-GTGTTAAGAAAGCGGCCTTTAAATCGATCGCAGCAAA-TTTTTATCGTTCAAGCAACTCGTTTGCTTCCTGCTCTCACTGCTCTCCTTCATGTCTGTGTTTTACTCCGTGGGCAAGCTGGGCATATTCCTGGCAATGCCCAGCCGCGCCCAACCGACGGCAACCCAAGCCTTCCCAGCGACCCGTGCCGAGTTGCGGGCGACTCTGTTTCCTCTGTTTTTCAACACAATTTGGGTGGTTCTGTTCGTGTTGCAGCACAGTGGCATGC-GGGCCGAGCAGGGTGAAGC-GGCTCTGGAAAGCGATCGGTCTCGAACTGGCCGAAAGAAGTCTGTACAACATTGCCTCGTCCTACTGTTTGCTGCTATTGTTGAAAAACTGGCAAACACCTTCCA-CGCAGTATCGGCTGTGGTTCTTCGAGGTGGAAACGAACCGTACGCTTTGGTGGCTCCTGGTCGGATCGCACGTGCTCTCGTGGATTGTCGTGTACGGTGGCAGCTTGATGGTGGATTTGCCG-GAGCTGATCGGGCTGAAGCACGTGTACTACGACATCAACGATTTGGCGCCCCCGATGTCGTACAAGTCGCGCGATCTGCAGGACTACTACAAGCGCTACCGCCATCCGTCGTTTGTGGCGCTGTCGGTTGTGCTGTGGTTGACCAACGGCATGACACTCGAGCGCTGCCTGCTTGCCGTCGTGTGGAGCGTTTACATGTACCTTGCCTGGAACACGACCGAGGCCGACCTGAAGTACCAGAAGCATCAGCTGGAGCGGAAACGCGCCGAGCTGGTTCGCGTAACCAAATAGACGGCCTCCCGATGAGGGTGTACAATCGGTGCCTTGCTTCACGCAATTGAATGGCAGCATTAATGTGTCGTGTTCAAACTGACTGAACTAATTTATAGAACTAGATAGAATTTTGGAGTGTAGTGAACTCCCAACAGAAATGACTAATAAACTAACCAAAGCATTTAATAAAAGGAAGCATT]

[+] EMBL CNS08MK7             [TAAACAACACGCTCGCTCACGTTAAACTCAGTAAAAAG GTGTTAAGAAAGCGGCCTTTAAATCGATCGCAGCAAAGTTTTTATCGTTCAAGCAACTCGTTTGCTTCCTGCTCTCACTGCTCTCCTTCATGTCTGTGTTTTACTCCGTGGGCAAGCTGGGCATATTCCTGGCAATGCCCAGCCGCGCCCAACCGACGGCAACCCAAGCCTTCCCAGCGACCCGTGCCGAGTTGCGGGCGACTCTGTTTCCTCTGTTTTTCAACACAATTTGGGTGGTTCTGTTCGTGTTGCAGCACAGTGGCATGC GGGCTGAG AGGGTGAAGC GGCTCTGGAAAGCGATCGGTCTTGAACTGGCCGAAAGAAGTCTGTACAACATTGCCTCGTCCTACTGTTTGCTGCTATTGTTGAAAAACTGGCAAACACCTTCCA CGCAGTATCGGCTGTGGTTCTTCGAGGTGGAAACGAACCGTACGCTTTGGTGGCTCCTGGTCGGATCGCACGTGCTCTCGTGGATTGTCGTGTACGGTGGCAGCTTCCTGGTGGATTTGCCG GAGCTGATCGGGCTGAAGCACGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CNS09QC0             [                       AAACTCAGTAAAAAGAGTGTTAAGAAAGCGGCCTTTAAATCGATCGCAGCAAA ATGATATCGTTCAAGCAACTCGTTTGCTTCCTGCTCTCACTGCTCTCCTTCATGTCTGTGTTTTACTCCGTGGGCAAGCTGGGCATATTCCTGGCAACGCCCAGCCGCGCCCAACCGACGGCAACCCAAGCCTTCCCAGCGACCCGTGCCGAGTTGCGGGCGACTCTGTTTCCTCTGTTTTTCAACACAATTTGGGTGGTTCTGTTCGTGTTGCAGCACAGTGGCATGCGGGGCCGAGCGGGGTGAAGCTGGCTCTGGAAAGCGATCGGTCTCGAACTGGCCGAAAGAAGTCTGTACAACATTGCCTCGTCCTACTGTTTGCTGCTATTGTTGAAAAACTGGCAAACACCTTCCA CGCAGTATCGGCTGTGGTTCTTCGAGGTGGAAACGAACCGTACGCTTTGGTGGCTCCTGGTCGGATCGCACGTGCTCTCGTGGATTGTCGTGTACGGTGGCAGCTTTATGGTGGATTTGCCGCGAGCTGATCGGGCTGAAGCACGTGTACTACGACATCAACGATTTGGCGCCCCCGATGTCGTACAAGTCGCGCGATCTGCAGGACTACTACAAGCGCTACCGCCATCCGTCGTTTGTGGCGCTGTCGGTTGTGCTGTGGTTGACCAACGGCATGACACTCGAGCGCTGCCTGCTTGCCGTCGTGTGGAGCGTTTACATGTACCTTGCCTGGAACACGACCGAGGCCGACCTGAAGTACCAGAAGCATCAGCTGGAGCGGAAACGCGCCGAGCTGGTTCGCGTAACCAAATAGACGGCCTCCCGATGAGGGTGTACAATCGGTGCCTTGCTTCACGCAATTGAATGGCAGCATTAATGTGTCGTGTTCAAACTGACTGAACTAATTTATA                                                                                     ]
[-] EMBL CNS09QC1             [                                                                                                                                                                                     CCGCGCCCAACCGACGGCAACCCAAGCCTTCCCAGCGACCCGTGCCGAGTTGCGGGCGACTCTGTTTCCTCTGTTTTTCAACACAATTTGGGTGGTTCTGTTCGTGTTGCAGCACAGTGGCATGC GGGCCGAGC GGGTGAAGC GGCTCTGGAAAGCGATCGGTCTCGAACTGGCCGAAAGAAGTCTGTACAACATTGCCTCGTCCTACTGTTTGCTGCTATTGTTGAAAAACTGGCAAACACCTTCCAGCGCAGTATCGGCTGTGGTTCTTCGAGGTGGAAACGAACCGTACGCTTTGGTGGCTCCTGGTCGGATCGCACGTGCTCTCGTGGATTGTCGTGTACGGTGGCAGCTTGATGGTGGATTTGCCG GAGCTGATCGGGCTAAAGCACGTGTACTACGACATCAACGATTTGGCGCCCCCGATGTCGTACAAGTCGCGCGATCTGCAGGACTACTAAAAGCGCAACCGCCATCCGTCGTTTGTGGCGCTGTCGGTTGTGCTGTGGTTGACCAACGGCATGACACTCGAGCGCTGCCTGCTTGCCGTCGTGTGGAGCGTTTACATGTACCTTGCCTGGAACACGACCGAGGCCGACCTGAAGTACCAGAAGCATCAGCTGGAGCGGAAACGCGCCGAGCTGGTTCGCGTAACCAAATAGACGGCCTCCCGATGAGGGTGTACAATCGGTGCCTTGCTTCACGCAATTGAATGGCAGCATTAATGTGTCGTGTTCAAACTGACTGAACTAATTTATAGAACTAGATAGAATTTTGGAGTGTAGTGAACTCCCAACAGAAATGACTAATAAACTAACCAAAGCATTTAATAAAAGGAAGCATT]
[-] EMBL CNS08MK8             [                                                                                                                                                                                                                                                                                                                                                                                                      ACTGTTTGCTGCTATTGTTGAAAAACTTGCAAACACCTTCCA CGCAGTATCGGCTTTGGTTCTTCGAGGGGGAAACGAACCGTACGCTTTGGTGGCTCCTGGTCGGATCGCACGTGCTCTCGTGGATTGTCGTGTACGGTGGCAGCTTGATGGTGGATTTGCCG GAGCTGATCGGGCTGAAGCACGTGTACTACGACATCAACGATTTAGCTCCCCCGATGTCGTACAAGTCGCGCGATCTGCAGGACTACTACAAGCGCTACCGCCATCCGTCGTTTGTGGCGCTGTCGGTTGTGCTGTGGTTGACCAACGGCATGACACTCGAGCGCTGCCTGCTTGCCGTCGTGTGGAGCGTTTACATGTACCTTGCCTGGAACACGACCGAGGCCGACCTGAAGTACCAGAAGCATCAGCTGGAGCGGAAACGCGCCGAGCTGGTTCGCGTAACCAAATAGACGGCCTCCCGATGAGGGTGTACAATCGGTGCCTTGCTTCACGCAATTGAATGGCAGCATTAATGTGTCGTGTAAAAAATGACTGAACTAATTTATAGAACTAGATAGAATTTTGGAGTGTAGTGTACTCCCAACAGAAATGTCTAATAAACTAACCAAA                      ]




>consensus_5177#0
TAAACAACACGCTCGCTCACGTTAAACTCAGTAAAAAGGTGTTAAGAAAGCGGCCTTTAA
ATCGATCGCAGCAAATTTTTATCGTTCAAGCAACTCGTTTGCTTCCTGCTCTCACTGCTC
TCCTTCATGTCTGTGTTTTACTCCGTGGGCAAGCTGGGCATATTCCTGGCAATGCCCAGC
CGCGCCCAACCGACGGCAACCCAAGCCTTCCCAGCGACCCGTGCCGAGTTGCGGGCGACT
CTGTTTCCTCTGTTTTTCAACACAATTTGGGTGGTTCTGTTCGTGTTGCAGCACAGTGGC
ATGCGGGCCGAGCAGGGTGAAGCGGCTCTGGAAAGCGATCGGTCTCGAACTGGCCGAAAG
AAGTCTGTACAACATTGCCTCGTCCTACTGTTTGCTGCTATTGTTGAAAAACTGGCAAAC
ACCTTCCACGCAGTATCGGCTGTGGTTCTTCGAGGTGGAAACGAACCGTACGCTTTGGTG
GCTCCTGGTCGGATCGCACGTGCTCTCGTGGATTGTCGTGTACGGTGGCAGCTTGATGGT
GGATTTGCCGGAGCTGATCGGGCTGAAGCACGTGTACTACGACATCAACGATTTGGCGCC
CCCGATGTCGTACAAGTCGCGCGATCTGCAGGACTACTACAAGCGCTACCGCCATCCGTC
GTTTGTGGCGCTGTCGGTTGTGCTGTGGTTGACCAACGGCATGACACTCGAGCGCTGCCT
GCTTGCCGTCGTGTGGAGCGTTTACATGTACCTTGCCTGGAACACGACCGAGGCCGACCT
GAAGTACCAGAAGCATCAGCTGGAGCGGAAACGCGCCGAGCTGGTTCGCGTAACCAAATA
GACGGCCTCCCGATGAGGGTGTACAATCGGTGCCTTGCTTCACGCAATTGAATGGCAGCA
TTAATGTGTCGTGTTCAAACTGACTGAACTAATTTATAGAACTAGATAGAATTTTGGAGT
GTAGTGAACTCCCAACAGAAATGACTAATAAACTAACCAAAGCATTTAATAAAAGGAAGC
ATT
clustalw multiple alignements is not computed in this case