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Anopheles gambiae
cluster # 5301 cluster # 5301       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5301#0 length = 1455 sequences # 4  

consensusID : consensus_5301#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1455
fasta sequence
                              [AGATCGCCACGAGGTTTTTTGTCGATGTTTTGCAGTCGCAGAAAAAAGCTACCTTAAATTGTTTATCATTATTTTTATGATAATTTGGCGCGTCTTCAAAGTCTTCAAAATACGCACTGCACTGTTTAGTGGTTACTTTTTTTCTTCTTTCTGTTAAGTAGCTTCTAATAGGCAATTAAAAACACCAAACAATCGAAACAGAAGGGATCGATAGCGAGGGAAACCAGATTCCATATACAGTGAACGATTTATTATGTTACCTAGCGGTGGATTGCAGTGGGAGCGTGCAGAAGGCATAAGAATGCAAAAGCGGTGGCACTTGAGGTGGTTTAAAAATATCTACCTTCTTCTCCGTTCAACCCTAACCTAGGTTAGATGAAATCATCTTGTGCAGGAAGTTGTAAAAACAAAACCCCATACACACATGTGCTCTCCGACACTCGAAAGCAATGCGCGCTCGAGTCGAAGGTGAAAATGTCTAAAACCAATTCCAACCGGCCTGGTATTTGCAACCCCACCTTCAGCGGGCCTCATGCAGGCGGAGACGAACGGACGGGCACATCTGCATCCACGGCCCGCGAAACTGCACCATGCAGTCACTATTTTTAGACCGTGCCTCACAGTTAGTCGTCGGTGCAAAGATCAGTGGGCCGGAGTGGGTTGTTTTTTTGGCTAGAAGTAGTCGTTGACTTCATGAAACTGCACTATCAAACAGAGCAAAAAAAAAAAGGGAGAAAAAGAAGAAAAAATGCATTTAACAGGAGGAGAAGAGACGGTATAAACACAACAGAGGGGTTTCGAGACAGACAGGAAGTTGCCAGACCGATTACAGTCGCGCCAGAATCACAGCCGCGTGGACACTTAGAAGANAGTGAGAGAGAGTGAGTAGCTCTCACAACGAAAGATGGCATGNCGGATATTGATAATGTGTATGTGTGTTTGTGTGTGAAGAATGTGCAGGACATGTTTTGGGACTTAGACAATAGCATAAGCCTAGCGTAAGACTTTATGTTAAGGATAGGTTTG--TTTTTCT-TCTTTTCGTTGGTATGTTTGTTCCCATACAATCAGAGCCGTGTCTTTTCGTTTCGTATCGTCTCTGCATTAAGCGTTTAGGCTAAGGTATCGTTCCAACTAGCATTACCGTGTTTTTTTCTTTCGTGGCCTAGCGTTTAAGACAGATTTAATTATTGTTTTGTTCGATTTGTTTAATGCAACGTTTAATTTGACCGATAGAAGAGAAGGGCGAGAGAGATAGAGAGCGATGCGACAGTGCCTCGGGCAAATGCGTACCACATGTGGAGAGAAGCCCGAGCCACTACAATATGCAACCGCAAGCGGTGTTGTACCAAGATAAATGTGGAAAAACCAATTCCAATACGCGGGGTCAGAAATAAAATTTCCTCACTTACATTATTGTAAAGAGTAACCTGAAAAAAAAAAAAAAACCTCGGCGAT]

[+] EMBL AL930445             [AGATCGCCACGAGGTTTTTTGTCGATGTTTTGCAGTCGCAGAAAAAAGCTACCTTAAATTGTTTATCATTATTTTTATGATAATTTGGCGCGTCTTCAAAGTCTTCAAAATACGCACTGCACTGTTTAGTGGTTACTTTTTTTCTTCTTTCTGTTAAGTAGCTTCTAATAGGCAATTAAAAACACCAAACAATCGAAACAGAAGGGATCGATAGCGAGGGAAACCAGATTCCATATACAGTGAACGATTTATTATGTTACCTAGCGGTGGATTGCAGTGGGAGCGTGCAGAAGGCATAAGAATGCAAAAGCGGTGGCACTTGAGGTGGTTTAAAAATATCTACCTTCTTCTCCGTTCAACCCTAACCTAGGTTAGATGAAATCATCTTGTGCAGGAAGTTGTAAAAACAAAACCCCATACACACATGTGCTCTCCGACACTCGAAAGCAATGCGCGCTCGAGTCGAAGGTGAAAATGTCTAAAACCAATTCCAACCGGCCTGGTATTTGCAACCCCACCTTCAGCGGGCCTCATGCAGGCGGAGACGAACGGACGGGCACATCTGCATCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX625809             [                                                                                            TCTTC AAGTCTTCAAAATACGCACTGCACTGTTTAGTGGTTACTTTTTTTCTTCTTTCTGTTAAGTAGCTTCTAATAGGCAATTAAAAACACCAAACAATCGAAACAGAAGGGATCGATAGCGAGGGAAACCAGATTCCATATACAGTGAACGATTTATTATGTTACCTAGCGGTGGATTGCAGTGGGAGCGTGCAGAAGGCATAAGAATGCAAAAGCGGTGGCACTTGAGGTGGTTTAAAAATATCTACCTTCTTCTCCGTTCAACCCTAACCTAGGTTAGATGAAATCATCTTGTGCAGGAAGTTGTAAAAACAAAACCCCATACACACATGTGCTCTCCGACACTCGAAAGCAATGCGCGCTCGAGTCGAAGGTGAAAATGTCTAAAACCAATTCCAACCGGCCTGGTATTTGCAACCCCACCTTCAGCGGGCCTCATGCAGGCGGAGACGAACGGACGGGCACATCTGCATCCACGGCCCGCGAAACTGCACCATGCAGTCACTATTTTTAGACCGTGCCTCACAGTTAGTCGTCGGTGCAAAGATCAGTGGGCCGGAGTGGGTTGTTTTTTTGGCTAGAAGTAGTCGTTGACTTCATGAAACTGCACTATCAAACAGAGCAAAAAAAAAAAGGGAGAAAAAGAAGAAAAAATGCATTTAACAGGAGGAGAAGAGACGGTATAAACACAACAGAGGGGTTTCGAGACAGACAGGAAGTTGCCAGACCGATTACAGTCGCGCCAGAATCACAGCCGCGTGGACACTTAGAAGANAGTGAGAGAGAGTGAGTAGCTCTCACAACGAAAGATGGCATGNCGGATATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX623560             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AACAGGAGGAGAAGAGACGGTATAAACACAACAGAGGGGTTTCGAGACAGACAGGAAGTTGCCAGACCGATTACAGTCGCGCCAGAATCACAGCCGCGTGGACACTTAGAAGAGAGTGAGAGAGAGTGAGTAGCTCTCACAACGAAAGATGGCATGCCGGATATTGATAATGTGTATGTGTGTTTGTGTGTGAAGAATGTGCAGGACATGTTTTGGGACTTAGACAATAGCATAAGCCTAGCGTAAGACTTTATGTTAAGGATAGGTTTG  TTTTTCT TCTTTTCGTTGGTATGTTTGTTCCCATACAATCAGAGCCGTGTCTTTTCGTTTCGTATCGTCTCTGCATTAAGCGTTTAGGCTAAGGTATCGTTCCAACTAGCATTACCGTGTTTTTTTCTTTCGTGGCCTAGCGTTTAAGACAGATTTAATTATTGTTTTGTTCGATTTGTTTAATGCAACGTTTAATTTGACCGATAGAAGAGAAGGGCGAGAGAGATAGAGAGCGATGCGACAGTGCCTCGGGCAAATGCGTACCACATGTGGAGAGAAGCCCGAGCCA                                                                                                                                            ]
[-] EMBL AL930133             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 tTAGCGTAAGACTTTATGTTAAGGATAGGTTTGTTTTTTTCTNTCTTTTCGTTGGTATGTTTGTTCCCACACAATCAGAGCC TGCCTTTTCGTTTCGTATCGTCTCTCCATTAAGCGTTTAGGCTAAGGTATCGTTCCAACTAGCATTACCGTGTTTTTTTCTTTCGTGGCCTAGCGTTTAAGACAGATTTAATTATTGTTTTGTTCGATTTGTTTAATGCATCGTTTAATTTGACCGATAGAAGAGAAGG    GAGAG  AGAGAGCGATGCGACATTGCCTCGGGCAAATGCGTACCACATGTGGAGAGAAGCCCGAGCCACTACAATATGCAACCGCAAGCGGTGTTGTACCAAGATAAATGTGGAAAAACCAATTCCAATACGCGGGGTCAGAAATAAAATTTCCTCACTTACATTATTGTAAAGAGTAACCTGAAAAAAAAAAAAAAACCTCGGCGAT]


>consensus_5301#0 AGATCGCCACGAGGTTTTTTGTCGATGTTTTGCAGTCGCAGAAAAAAGCTACCTTAAATT GTTTATCATTATTTTTATGATAATTTGGCGCGTCTTCAAAGTCTTCAAAATACGCACTGC ACTGTTTAGTGGTTACTTTTTTTCTTCTTTCTGTTAAGTAGCTTCTAATAGGCAATTAAA AACACCAAACAATCGAAACAGAAGGGATCGATAGCGAGGGAAACCAGATTCCATATACAG TGAACGATTTATTATGTTACCTAGCGGTGGATTGCAGTGGGAGCGTGCAGAAGGCATAAG AATGCAAAAGCGGTGGCACTTGAGGTGGTTTAAAAATATCTACCTTCTTCTCCGTTCAAC CCTAACCTAGGTTAGATGAAATCATCTTGTGCAGGAAGTTGTAAAAACAAAACCCCATAC ACACATGTGCTCTCCGACACTCGAAAGCAATGCGCGCTCGAGTCGAAGGTGAAAATGTCT AAAACCAATTCCAACCGGCCTGGTATTTGCAACCCCACCTTCAGCGGGCCTCATGCAGGC GGAGACGAACGGACGGGCACATCTGCATCCACGGCCCGCGAAACTGCACCATGCAGTCAC TATTTTTAGACCGTGCCTCACAGTTAGTCGTCGGTGCAAAGATCAGTGGGCCGGAGTGGG TTGTTTTTTTGGCTAGAAGTAGTCGTTGACTTCATGAAACTGCACTATCAAACAGAGCAA AAAAAAAAAGGGAGAAAAAGAAGAAAAAATGCATTTAACAGGAGGAGAAGAGACGGTATA AACACAACAGAGGGGTTTCGAGACAGACAGGAAGTTGCCAGACCGATTACAGTCGCGCCA GAATCACAGCCGCGTGGACACTTAGAAGANAGTGAGAGAGAGTGAGTAGCTCTCACAACG AAAGATGGCATGNCGGATATTGATAATGTGTATGTGTGTTTGTGTGTGAAGAATGTGCAG GACATGTTTTGGGACTTAGACAATAGCATAAGCCTAGCGTAAGACTTTATGTTAAGGATA GGTTTGTTTTTCTTCTTTTCGTTGGTATGTTTGTTCCCATACAATCAGAGCCGTGTCTTT TCGTTTCGTATCGTCTCTGCATTAAGCGTTTAGGCTAAGGTATCGTTCCAACTAGCATTA CCGTGTTTTTTTCTTTCGTGGCCTAGCGTTTAAGACAGATTTAATTATTGTTTTGTTCGA TTTGTTTAATGCAACGTTTAATTTGACCGATAGAAGAGAAGGGCGAGAGAGATAGAGAGC GATGCGACAGTGCCTCGGGCAAATGCGTACCACATGTGGAGAGAAGCCCGAGCCACTACA ATATGCAACCGCAAGCGGTGTTGTACCAAGATAAATGTGGAAAAACCAATTCCAATACGC GGGGTCAGAAATAAAATTTCCTCACTTACATTATTGTAAAGAGTAACCTGAAAAAAAAAA AAAAACCTCGGCGAT



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)