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Anopheles gambiae
cluster # 5320 cluster # 5320       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5320#0 length = 1323 sequences # 4  

consensusID : consensus_5320#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1323
fasta sequence
                              [ATCAGCAGCAACAGCAGGATGGCGAGCGACGATGCTCCCTTGCAAGATTCCGTTTCTTGCAACACAGAACAAAAAGAAGCCGAACAAGAAGCCCCGCAAAGTTTGTTGCATATTTGCCGATTTTGTCTGTCCCGCGATGAGGAAGATTTAATTCCCCTAGAGAACGTACTACTACTAACGCTTACGATCGAGGACATTCTGCTGTTTACAGGCATCCAGATAGAGGAGGAGGACTATGGAGAAATCGCCTTGTGCGTGAAATGTACGAACAAGATACAGATCTGTTCCTACTTCCGGCACTGCTGCCTAACCAACGATACCACCTTTCGCGAGCTGTGCGCGGACCTGATCGCCAAAGTAAAGGCGGCACGCATCGAAGCGAAGGAAGCGGCGGCCGCCGCAGAACAGGCCTTGCGGGAGGCTGAGGAAGCCGCACTGGAAGTAGAGGCCGCCAACCAGCACTGCGACACGATCGAGCTCAGCAGTGACGATGAGTTTAACTACTCGGCCAACTACATCAAACCCGGCGAAGTGTTACACATTGAGGAGCCGATGTACAGACCGTCCGATTGGGACATGAGCTTAAATCCGACGCCCCCAGCCGTTCAGTGCCATCCGCGCGAAAAGGGCAAGCGCAAACTGCATCTGTGCGATCTGTGCGGGCTGAAGGTTGGCCACATTCCTACCCACTACCTGGACCACAGCACGGTGGCAACGGTTGGCTGTCCGTACTGTCCGGTGAAAATGAAGGCCCAGAAAAGTATCAACGAACACATCCA-CACGGTGCACTTTAAGCTCGTCTCGAAAACGTGCGAAATCTGCGGCAAAGGCTTCGTCCACCATAAAACGTACAAATACCATATGATTACACACCAAGACGAGGGAAATACGTTCGAATGCAAAGACTGCTCGAAAACATTCACCAACTCAATCTACCTGCGGGACCACATTAAGAGGGTGCATAATGCGGCGAAAAAAGTTAAACCCAAGGACTCGGAAGAAACCGTG--AAAAAAAAAAGAATCCGATCACGCAATTCTGAAGATAACCGCATCTACCCCGACTCGGACTGAGGGCCTAAATCTGCTTACAAGCCACCATCGGCAGACGAATGAGCCACCAATGTTAATGTATTTTTAACTTCCAGTATACTAAAACGCTTTCTAACTATAGTACCGTACACCTCCTACAATCGGTATTGCTGCTATATCCGAATAAGGAGTTGTTTTAGAAGTTCTGTCTACCCAAATCAATCGATCCGAGAGAAACATTTACTCATTGCTATGCGCATCCATATTGAAAT-ACAGGTAGTTCCCGAGATCCGA]

[+] EMBL CNS08L6W             [ATCAGCAGCAACAGCAGGATGGCGAGCGACGATGCTCCCTTGCAAGATTCCGTTTCTTGCAACACAGAACAAAAAGAAGCCGAACAAGAAGCCCCGCAAAGTTTGTTGCATATTTGCCGATTTTGTCTGTCCCGCGATGAGGAAGATTTAATTCCCCTAGAGAACGTACTACTACTAACGCTTACGATCGAGGACATTCTGCTGTTTACAGGCATCCAGATAGAGGAGGAGGACTATGGAGAAATCGCCTTGTGCGTGAAATGTACGAACAAGATACAGATCTGTTCCTACTTCCGGCACTGCTGCCTAACCAACGATACCACCTTTCGCGAGCTGTGCGCGGACCTGATCGCCAAAGTAAAGGCGGCACGCATCGAAGCGAAGGAAGCGGCGGCCGCCGCAGAACAGGCCTTGCGGGAGGCTGAGGAAGCCGCACTGGAAGTAGAGGCCGCCAACCAGCACTGCGACACGATCGAGCTCAGCAGTGACGATGAGTTTAACTACTCGGCCAACTACATCAAACCCGGCGAAGTGTTACACATTGAGGAGCCGATGTACAGACCGTCCGATTGGGACATGAGCTTAAATCCGACGCCCCCAGCCGTTCAGTGCCATCCGCGCGAAAAGGGCAAGCGCAAACTGCATCTGTGCGATCTGTGCGGGCTGAAGGTTGGCCACATTCCTACCCACTACCTGGACCACAGCACGGTGGCAACGGTTGGCTGTTCGTACTGTCCGGTGAAAATGAAGGCCCAGAAAAGTATCAACGAACACATCCA CACGGTGCACTTTAAGCTCGTCTCGAAAACGTGCGAAATCTGCGGCAAAGGCTTCGTCCACCATAAAACGTACAAATACCATATGATTACACACCAAGACGAGGGAAATACGTTCGAATGCAAAGACTGCTCGAAAACATTCACCAACTCAATCTACCTGCGGGACCACATTA                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AL930617             [       gccgaggtAGGATGGCGAGCGACGATGCTCCCTNGC AGATTCCGTTTCTTGCAACACAGAACAAAAAGAGGCCGAACAAGAAGCCCCGCAAAGTTTGTTGCATATTTGCCGATTTTGTCTGTCCCCCGATGAGGAAGATTTAATTCCCCTAGAGAACGTACTACTACTAACGCTTACGATCGAGGACATTCTGCTGTTTACAGGCATCCAGATAGAGGAGGAGGACTATGGAGAAATCGCCTTGTGCGTGAAATGTACGAACAAGATACAGATCTGTTCCTACTTCCGGCACTGGTGCCTAACCAACGATACCACCTTTCGCGAGCTGTGCGCGGACCTGATCGCCAAAGTAAAGGCGGCACGCATCGAAGCGAAGGAAGCGGCGGCCGCCGCAGAACAGGCCTTGCGGGAGGCTGAGGAAGCCGCACTGGAAGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CNS08L6X             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGATGTACAGACCGTCCAATTGGGACATGAGCTTAAATCCCACGCCCCCAGCCGTTAAGTGCCATCCGCGCGAAAAGGGAAAGCGCAAACTGCATCTGTGCGATCTGTGCGGGCTGAAGGTTGGCCAAATTCCTACCCACTACCTGGACCACAGCACGGTGGCAACGGTTGGCTGTCCGTACTGTCCGGTGAAAATGAAGGCCCAGAAAAGTTTCAACGAACACATCCA CACGGTGCACTTTAAGCTCGTCTCGAAAACGTGCGAAATCTGCGGCAAAGGCTTCGTCCACCATAAAACGTACAAATACCATATGATTACACACCAAGACGAGGGAAATACGTTCGAATGCAAAAACTGCTCGAAAACATTCACCCACTCAATCTA CTGCGGGACCACATTAAGAGGGTGCATAATGCGGCGAAAAAAGTTAAACCCAAGGACTCGGAAGAAACCGTGAAAAAAAAAAAAGAATCCGATCACGCAATTCTGAAGATAACCGCATCTACCCCGACTCGGACTGAGGGCCTAAATCTGCTTACAAGCCACCATCGGCAGACGAATGAGCCACCAATGTTAATGTATTTTTAACTTCCAGTATACTAAAACGCTTTCTAACTATAGTACCGTACACCTCCTACAATCGGTATTGCTGCTATATCCGAATAAGGAGTTGTTTTAGAAGTTCTGTCTACCCAAATCAATCGATCCGAGAGAAACATTTACTCATTGCTATGCGCATCCATATTGAAATAACAGGTAGTTC           ]
[-] EMBL BM589413             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCACATTCCTACCCACTACCTGGACCACAGCACGGTGGCAACGGTTGGCTGTCCGTACTGTCCGGTGAAAATGAAGGCCCAGAAAAGTATCAACGAACACATCCACCCCGGTGCACTTTAAGCTCGTCTCGAAAACGTGCGAAATCTGCGGCAAAGGCTTCGTCCACCATAAAACGTACAGATACCATATGATTACACACCAAGACGAGGGAAATACGTTCGAATGCAAAGACTGCTCGAAAACATTCACCAACTCAATCTACCTGCGGGACCACATTAAGAGGGTGCATAATGCGGCGAAAAAAGTTAAACCCAAGGACTCGGAAGAAACCGTG  AAAAAAAAAAGAATCCGATCACGCAATTCAGAAGATAACCGCATCTACCCCGACTCGGACTGAGGGCCTAAATCTGCTTACAAGCCACCATCGGCAGACGAATGAGCCACCAATGTTAATGTATTTTTAACTTCCAGTATACTAAAACGCTTTCTAACTATAGTACCGTACACCTCCTACAATCGGTATTGCTGCTATATCCGAATAAGGAGTTCTTTTAGAAGTTCTGTCTACCCAAATCAATCGATCCGAGAGAAACATTCACTCATTGTTATGCGCATCCATATTGAAAT ACAGGTAGTTCCCGAGATCCGA]


>consensus_5320#0 ATCAGCAGCAACAGCAGGATGGCGAGCGACGATGCTCCCTTGCAAGATTCCGTTTCTTGC AACACAGAACAAAAAGAAGCCGAACAAGAAGCCCCGCAAAGTTTGTTGCATATTTGCCGA TTTTGTCTGTCCCGCGATGAGGAAGATTTAATTCCCCTAGAGAACGTACTACTACTAACG CTTACGATCGAGGACATTCTGCTGTTTACAGGCATCCAGATAGAGGAGGAGGACTATGGA GAAATCGCCTTGTGCGTGAAATGTACGAACAAGATACAGATCTGTTCCTACTTCCGGCAC TGCTGCCTAACCAACGATACCACCTTTCGCGAGCTGTGCGCGGACCTGATCGCCAAAGTA AAGGCGGCACGCATCGAAGCGAAGGAAGCGGCGGCCGCCGCAGAACAGGCCTTGCGGGAG GCTGAGGAAGCCGCACTGGAAGTAGAGGCCGCCAACCAGCACTGCGACACGATCGAGCTC AGCAGTGACGATGAGTTTAACTACTCGGCCAACTACATCAAACCCGGCGAAGTGTTACAC ATTGAGGAGCCGATGTACAGACCGTCCGATTGGGACATGAGCTTAAATCCGACGCCCCCA GCCGTTCAGTGCCATCCGCGCGAAAAGGGCAAGCGCAAACTGCATCTGTGCGATCTGTGC GGGCTGAAGGTTGGCCACATTCCTACCCACTACCTGGACCACAGCACGGTGGCAACGGTT GGCTGTCCGTACTGTCCGGTGAAAATGAAGGCCCAGAAAAGTATCAACGAACACATCCAC ACGGTGCACTTTAAGCTCGTCTCGAAAACGTGCGAAATCTGCGGCAAAGGCTTCGTCCAC CATAAAACGTACAAATACCATATGATTACACACCAAGACGAGGGAAATACGTTCGAATGC AAAGACTGCTCGAAAACATTCACCAACTCAATCTACCTGCGGGACCACATTAAGAGGGTG CATAATGCGGCGAAAAAAGTTAAACCCAAGGACTCGGAAGAAACCGTGAAAAAAAAAAGA ATCCGATCACGCAATTCTGAAGATAACCGCATCTACCCCGACTCGGACTGAGGGCCTAAA TCTGCTTACAAGCCACCATCGGCAGACGAATGAGCCACCAATGTTAATGTATTTTTAACT TCCAGTATACTAAAACGCTTTCTAACTATAGTACCGTACACCTCCTACAATCGGTATTGC TGCTATATCCGAATAAGGAGTTGTTTTAGAAGTTCTGTCTACCCAAATCAATCGATCCGA GAGAAACATTTACTCATTGCTATGCGCATCCATATTGAAATACAGGTAGTTCCCGAGATC CGA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)