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Anopheles gambiae
cluster # 5352 cluster # 5352       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5352#0 length = 1481 sequences # 1  
consensus_5352#1 length = 830 sequences # 2  
consensus_5352#2 length = 558 sequences # 1  

consensusID : consensus_5352#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1481
fasta sequence
                              [GGCAAAGAATCCCGCACGAGGTTAACACATGAACGGTATAGAGGCCATGATGGTGACTTTCTATGACCCCGGTTTAGATCCGTACTGCTGTTTGTTGCCATCCTCTCAGGCATCATAAGGCAGGCAGACAGACGCAAAGTCATGAAACATAAAGACTGTTTCTTAGAAACGTCGAACGTTTCGAGCACACAGATCAGTCGATGTCAAAGCNACGGANTCGCCGGTGTTTTCAGCGGGAGGGGCAAGACTAGGAGAGGGCGCCGAACAGACGGCGTTTNNACACGATCCGCCTGGNGCTGTACGGCNCNTGTGACGCCCCTTANTTNCTCTTGNGTCCCTACCCCANCGCCCCGCGTTCCGCACTNNGGGGGNNCCCACCCCTCGGNCGGAGGCCNGCAGTCNCGGNCTGCCTCGGCACTGCCNGCCGATANGCGTTAGTATTGCCCNCGACATCGAAAGANNACATNGCGNAAAGGGTAGGATNAGNTACGGGGGCGCGNGNATCNGCGACGTTCAGNCCNGTGCGGAACAGNACATGCCGNAGCACCACCNCGACGGCCCCACGGCCCACAGCGGCAGCGNCCGGACCTTCACCGCGGGCNTNACGAAGCTNTNGCNGCACCTCGGTCTGCNCCGACGCAGGACGACNAGGCNAGCATGGGGGGCCATACGCGAGGCANTCNGCACAGAGGCGGCGCNGTGTNGCTGGGACGNTACGATAGNGNGGTGNGCNNNCTCCGGGNGGCANCCGTNCCCGGGNCCACACACNGATCGTNGCTAGCAGTAACNCGCTANAGGGAGGNAGGNGGGGCGAGGTGCGGNANTGCCGAGAAGGCGAACAGTAAANCGCGAGANCCGGCGNGNAGGTGATCGGACCANGNCCCACTNGCGNGCNGGAACCAGTNNAAANCGACCAGNAGAACCCTNCGACCNGGCNAGTCNACGTTGGGANACAGGCACGTCAGAGGNNACCGCACAGCCGGACGCAGCGCCNGCAGNCCCCNAGGCCCCCGAGGAGCCGGGGCNGCNGCCGACACNNTNCGCTACNANANNTCGGAGCANCGGCGANGGCCNGTCGAGCAAANCGNGNCNGCCNNGCCTCGNCCGCTAGGCNCNCCGGCAGGCGAGGGGCAGNNNCGNNAGGNAGTNTGACNATNCTGCGCNTNGANANTGNGCTCAANGTAGCGTTTCCAATGCGACNCNNNTTGCATNTGTTAAGANGGNGANGGTGCGTGAANNACCNGAGNAAACNCACGAACNGGGNAGACNCACNGCCGGGCNANACACACCGCCGCGAGNGANGACGANCTGCCNNGATCGCCAGCCNACNCCGCNCCTGGAACGNGGNCACGAGNCNNGGCCCCGNGNNGCNGGCCNNCCNCGGCCGCGGGNCTGAGCAGCAAANNAGNNAGCNANNATACGATCAACGACNANCGGACGCCNAGTCGANNNCNGCCGACCCTAAANCCANNAGNCGAANG]

[+] EMBL BX466119             [GGCAAAGAATCCCGCACGAGGTTAACACATGAACGGTATAGAGGCCATGATGGTGACTTTCTATGACCCCGGTTTAGATCCGTACTGCTGTTTGTTGCCATCCTCTCAGGCATCATAAGGCAGGCAGACAGACGCAAAGTCATGAAACATAAAGACTGTTTCTTAGAAACGTCGAACGTTTCGAGCACACAGATCAGTCGATGTCAAAGCNACGGANTCGCCGGTGTTTTCAGCGGGAGGGGCAAGACTAGGAGAGGGCGCCGAACAGACGGCGTTTNNACACGATCCGCCTGGNGCTGTACGGCNCNTGTGACGCCCCTTANTTNCTCTTGNGTCCCTACCCCANCGCCCCGCGTTCCGCACTNNGGGGGNNCCCACCCCTCGGNCGGAGGCCNGCAGTCNCGGNCTGCCTCGGCACTGCCNGCCGATANGCGTTAGTATTGCCCNCGACATCGAAAGANNACATNGCGNAAAGGGTAGGATNAGNTACGGGGGCGCGNGNATCNGCGACGTTCAGNCCNGTGCGGAACAGNACATGCCGNAGCACCACCNCGACGGCCCCACGGCCCACAGCGGCAGCGNCCGGACCTTCACCGCGGGCNTNACGAAGCTNTNGCNGCACCTCGGTCTGCNCCGACGCAGGACGACNAGGCNAGCATGGGGGGCCATACGCGAGGCANTCNGCACAGAGGCGGCGCNGTGTNGCTGGGACGNTACGATAGNGNGGTGNGCNNNCTCCGGGNGGCANCCGTNCCCGGGNCCACACACNGATCGTNGCTAGCAGTAACNCGCTANAGGGAGGNAGGNGGGGCGAGGTGCGGNANTGCCGAGAAGGCGAACAGTAAANCGCGAGANCCGGCGNGNAGGTGATCGGACCANGNCCCACTNGCGNGCNGGAACCAGTNNAAANCGACCAGNAGAACCCTNCGACCNGGCNAGTCNACGTTGGGANACAGGCACGTCAGAGGNNACCGCACAGCCGGACGCAGCGCCNGCAGNCCCCNAGGCCCCCGAGGAGCCGGGGCNGCNGCCGACACNNTNCGCTACNANANNTCGGAGCANCGGCGANGGCCNGTCGAGCAAANCGNGNCNGCCNNGCCTCGNCCGCTAGGCNCNCCGGCAGGCGAGGGGCAGNNNCGNNAGGNAGTNTGACNATNCTGCGCNTNGANANTGNGCTCAANGTAGCGTTTCCAATGCGACNCNNNTTGCATNTGTTAAGANGGNGANGGTGCGTGAANNACCNGAGNAAACNCACGAACNGGGNAGACNCACNGCCGGGCNANACACACCGCCGCGAGNGANGACGANCTGCCNNGATCGCCAGCCNACNCCGCNCCTGGAACGNGGNCACGAGNCNNGGCCCCGNGNNGCNGGCCNNCCNCGGCCGCGGGNCTGAGCAGCAAANNAGNNAGCNANNATACGATCAACGACNANCGGACGCCNAGTCGANNNCNGCCGACCCTAAANCCANNAGNCGAANG]


>consensus_5352#0 GGCAAAGAATCCCGCACGAGGTTAACACATGAACGGTATAGAGGCCATGATGGTGACTTT CTATGACCCCGGTTTAGATCCGTACTGCTGTTTGTTGCCATCCTCTCAGGCATCATAAGG CAGGCAGACAGACGCAAAGTCATGAAACATAAAGACTGTTTCTTAGAAACGTCGAACGTT TCGAGCACACAGATCAGTCGATGTCAAAGCNACGGANTCGCCGGTGTTTTCAGCGGGAGG GGCAAGACTAGGAGAGGGCGCCGAACAGACGGCGTTTNNACACGATCCGCCTGGNGCTGT ACGGCNCNTGTGACGCCCCTTANTTNCTCTTGNGTCCCTACCCCANCGCCCCGCGTTCCG CACTNNGGGGGNNCCCACCCCTCGGNCGGAGGCCNGCAGTCNCGGNCTGCCTCGGCACTG CCNGCCGATANGCGTTAGTATTGCCCNCGACATCGAAAGANNACATNGCGNAAAGGGTAG GATNAGNTACGGGGGCGCGNGNATCNGCGACGTTCAGNCCNGTGCGGAACAGNACATGCC GNAGCACCACCNCGACGGCCCCACGGCCCACAGCGGCAGCGNCCGGACCTTCACCGCGGG CNTNACGAAGCTNTNGCNGCACCTCGGTCTGCNCCGACGCAGGACGACNAGGCNAGCATG GGGGGCCATACGCGAGGCANTCNGCACAGAGGCGGCGCNGTGTNGCTGGGACGNTACGAT AGNGNGGTGNGCNNNCTCCGGGNGGCANCCGTNCCCGGGNCCACACACNGATCGTNGCTA GCAGTAACNCGCTANAGGGAGGNAGGNGGGGCGAGGTGCGGNANTGCCGAGAAGGCGAAC AGTAAANCGCGAGANCCGGCGNGNAGGTGATCGGACCANGNCCCACTNGCGNGCNGGAAC CAGTNNAAANCGACCAGNAGAACCCTNCGACCNGGCNAGTCNACGTTGGGANACAGGCAC GTCAGAGGNNACCGCACAGCCGGACGCAGCGCCNGCAGNCCCCNAGGCCCCCGAGGAGCC GGGGCNGCNGCCGACACNNTNCGCTACNANANNTCGGAGCANCGGCGANGGCCNGTCGAG CAAANCGNGNCNGCCNNGCCTCGNCCGCTAGGCNCNCCGGCAGGCGAGGGGCAGNNNCGN NAGGNAGTNTGACNATNCTGCGCNTNGANANTGNGCTCAANGTAGCGTTTCCAATGCGAC NCNNNTTGCATNTGTTAAGANGGNGANGGTGCGTGAANNACCNGAGNAAACNCACGAACN GGGNAGACNCACNGCCGGGCNANACACACCGCCGCGAGNGANGACGANCTGCCNNGATCG CCAGCCNACNCCGCNCCTGGAACGNGGNCACGAGNCNNGGCCCCGNGNNGCNGGCCNNCC NCGGCCGCGGGNCTGAGCAGCAAANNAGNNAGCNANNATACGATCAACGACNANCGGACG CCNAGTCGANNNCNGCCGACCCTAAANCCANNAGNCGAANG



consensusID : consensus_5352#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 830
fasta sequence
                              [CCCCGGCCCACGTGAGAAAAGCGTCATCGTCCCTCCCCATATATAGCCGTCTTAAAAAAAAACAAAAACAGCTATCCTCAAGTAAGATTAAATAATATCTGTGGTAGAGAGAATGAACACATGAACGGTATAGAGGCGATGATGGTGACTTTCTATGCCCCGGTTTAGATCCGTACTGCTGTTTGTTGCCATCCTCTCAGGCATCATAAGGCAGGCAGCCAGACGCAAATCATGAAACATAAAGACTTTTCTTAGAAACTCGAACTTTCGAGCACACGATCATCATTCAAACACGATCGCGGTTTAGGGAGGGCAAGTAGAGAGCGCGAAACGCGTCAAACGAACGTGGGTGTTTGTTTTGAGCATATTATATGATACTACAAAGCAAATGAGATAGGAACCACCTAGGGAGAGAGAGGGTGTGGGAAGCGTGTGTGTGCAGTGAAATTATGTATAGGGTAAAATATCTGTATCAAACAAAAAACCACACGAAGATCAGGAAATTTGGAGGGAAACATATAGAACTTGATAGTGAGAAATGCATATACACACATGCACCGATAACACACAATTGCGTAGACAGAAAGGACATATTATATATACACCCTTCCCTCCCCTCCAACCACTAAACAAGGTACTATATATACATATACACACAGCAGCATACACACTATAAATTATATAAAATTATATACATTCGTCGTGTTGGAAGAAACTACCATTTTATTCAAAGTACCAGCAAATGGTGTGGGGTCGACGAAGACGACAATGGAATCGTGCAAAAACTAGGGGACTTGTAACTTGGCTGCTTTTAAGAAGAAACAAACACC]

[+] EMBL BX616934             [CCCCGGCCCACGTGAGAAAAGCGTCATCGTCCCTCCCCATATATAGCCGTCTTAAAAAAAAACAAAAACAGCTATCCTCAAGTAAGATTAAATAATATCTGTGGTAGAGAGAATGAACACATGAACGGTATAGAGGCGATGATGGTGACTTTCTATGCCCCGGTTTAGATCCGTACTGCTGTTTGTTGCCATCCTCTCAGGCATCATAAGGCAGGCAGCCAGACGCAAATCATGAAACATAAAGACTTTTCTTAGAAACTCGAACTTTCGAGCACACGATCATCATTCAAACACGATCGCGGTTTAGGGAGGGCAAGTAGAGAGCGCGAAACGCGTCAAACGAACGTGGGTGTTTGTTTTGAGCATATTATATGATACTACAAAGCAAATGAGATAGGAACCACCTAGGGAGAGAGAGGGTGTGGGAAGCGTGTGTGTGCAGTGAAATTATGTATAGGGTAAAATATCTGTATCAAACAAAAAACCACACGAAGATCAGGAAATTTGGAGGGAAACATATAGAACTTGATAGTGAGAAATGCATATACACACATGCACCGATAACACACAATTGCGTAGACAGAAAGGACATATTATATATACACCCTTCCCTCCCCTCCAACCACTAAACAAGGTACTATATATACATATACACACAGCAGCATACACACTATAAATTATATAAAATTATATACATTCGTCGTGTTGGAAGAAACTACCATTTTATTCAAAGTACCAGCAAATGGTGTGGGGTCGACGAAGACGACAATGGAATCGTGCAAAAACTAGGGGACTTGTAACTTGGCTGCTTTTAAGAAGAAACAAACACC]
[+] EMBL BM650703             [                         ccgGTCCCTCCCCATATATAGCCGTCTTAAAAAAAAACAAAAACAGCTATCCTCAAGTAAGATTAAATAATATCTGTGGTAGAGAGAATGAACACATGAACGGTATAGAGGCGATGATGGTGACTTTCTATGCCCCGGTTTAGATCCGTACTGCTGTTTGTTGCCATCCTCTCAGGCATCATAAGGCAGGCAGCCAGACGCAAATCATGAAACATAAAGACTTTTCTTAGAAACTCGAACTTTCGAGCACACGATCATCATTCAAACACGATCGCGGTTTAGGGAGGGCAAGTAGAGAGCGCGAAACGCGTCAAACGAACGTGGGTGTTTGTTTTGAGCATATTATATGATACTACAAAGCAAATGAGATAGGAACCACCTAGGGAGAGAGAGGGTGTGGGAAGCGTGTGTGTGCAGTGAAATTATGTATAGGGTAAAATATCTGTATCAAACAAAAAACCACACGAAGATCAGGAAATTTGGAGGGAAACATATAGAACTTGATAGTGAGAAATGCATATACACACATGCACCGATAACACACAATTGCGTAGACAGAAAGGACATATTATATATACACCCTTCCCTCCCCTCCAACCA                                                                                                                                                                                                             ]


>consensus_5352#1 CCCCGGCCCACGTGAGAAAAGCGTCATCGTCCCTCCCCATATATAGCCGTCTTAAAAAAA AACAAAAACAGCTATCCTCAAGTAAGATTAAATAATATCTGTGGTAGAGAGAATGAACAC ATGAACGGTATAGAGGCGATGATGGTGACTTTCTATGCCCCGGTTTAGATCCGTACTGCT GTTTGTTGCCATCCTCTCAGGCATCATAAGGCAGGCAGCCAGACGCAAATCATGAAACAT AAAGACTTTTCTTAGAAACTCGAACTTTCGAGCACACGATCATCATTCAAACACGATCGC GGTTTAGGGAGGGCAAGTAGAGAGCGCGAAACGCGTCAAACGAACGTGGGTGTTTGTTTT GAGCATATTATATGATACTACAAAGCAAATGAGATAGGAACCACCTAGGGAGAGAGAGGG TGTGGGAAGCGTGTGTGTGCAGTGAAATTATGTATAGGGTAAAATATCTGTATCAAACAA AAAACCACACGAAGATCAGGAAATTTGGAGGGAAACATATAGAACTTGATAGTGAGAAAT GCATATACACACATGCACCGATAACACACAATTGCGTAGACAGAAAGGACATATTATATA TACACCCTTCCCTCCCCTCCAACCACTAAACAAGGTACTATATATACATATACACACAGC AGCATACACACTATAAATTATATAAAATTATATACATTCGTCGTGTTGGAAGAAACTACC ATTTTATTCAAAGTACCAGCAAATGGTGTGGGGTCGACGAAGACGACAATGGAATCGTGC AAAAACTAGGGGACTTGTAACTTGGCTGCTTTTAAGAAGAAACAAACACC



consensusID : consensus_5352#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 558
fasta sequence
                              [CCAAGAATTCGGCACGATGGAAGATTAATAATATCTGTGGTAGAGAGAATGAACACATGAACGGTATAGAGGCGATGATGGTGACTTTCTATGCCCCGGTTTAGATCCGTACTGCTGTTTGTTGCCATCCTCTCAGGCATCATAAGGCAGGCAGCCAGACGCAAATCATGAAACATAAAGACTTTTCTTAGAAACTCGAACTTTCGAGCACACGATCATCATTCAAACACGATCGCGGTTTAGGGAGGGCAAGTAGAGAGCGCGAAACGCGTCAAACGAACGTGGGTGTTTGTTTTGAGCATATTATATGATACTACAAAGCAAATGAGATAGGAACCACCTAGGGAGAGAGAGGGTGTGGGAAGCGTGTGTGTGCAGTGAAATTATGTATAGGGTAAAATATCTGTATCAAACAAAAAACCACACGAAGATCAGGAAATTTTGGAGGGAAACATATAGAACTTGATAGTGAGAAATGCATATACACACATGCACCGATACACACAATTGCGTAGACGAAAGGACATATTATATATACACCCTTCCCTCCCCTCCAAC]

[+] EMBL BX467908             [CCAAGAATTCGGCACGATGGAAGATTAATAATATCTGTGGTAGAGAGAATGAACACATGAACGGTATAGAGGCGATGATGGTGACTTTCTATGCCCCGGTTTAGATCCGTACTGCTGTTTGTTGCCATCCTCTCAGGCATCATAAGGCAGGCAGCCAGACGCAAATCATGAAACATAAAGACTTTTCTTAGAAACTCGAACTTTCGAGCACACGATCATCATTCAAACACGATCGCGGTTTAGGGAGGGCAAGTAGAGAGCGCGAAACGCGTCAAACGAACGTGGGTGTTTGTTTTGAGCATATTATATGATACTACAAAGCAAATGAGATAGGAACCACCTAGGGAGAGAGAGGGTGTGGGAAGCGTGTGTGTGCAGTGAAATTATGTATAGGGTAAAATATCTGTATCAAACAAAAAACCACACGAAGATCAGGAAATTTTGGAGGGAAACATATAGAACTTGATAGTGAGAAATGCATATACACACATGCACCGATACACACAATTGCGTAGACGAAAGGACATATTATATATACACCCTTCCCTCCCCTCCAAC]


>consensus_5352#2 CCAAGAATTCGGCACGATGGAAGATTAATAATATCTGTGGTAGAGAGAATGAACACATGA ACGGTATAGAGGCGATGATGGTGACTTTCTATGCCCCGGTTTAGATCCGTACTGCTGTTT GTTGCCATCCTCTCAGGCATCATAAGGCAGGCAGCCAGACGCAAATCATGAAACATAAAG ACTTTTCTTAGAAACTCGAACTTTCGAGCACACGATCATCATTCAAACACGATCGCGGTT TAGGGAGGGCAAGTAGAGAGCGCGAAACGCGTCAAACGAACGTGGGTGTTTGTTTTGAGC ATATTATATGATACTACAAAGCAAATGAGATAGGAACCACCTAGGGAGAGAGAGGGTGTG GGAAGCGTGTGTGTGCAGTGAAATTATGTATAGGGTAAAATATCTGTATCAAACAAAAAA CCACACGAAGATCAGGAAATTTTGGAGGGAAACATATAGAACTTGATAGTGAGAAATGCA TATACACACATGCACCGATACACACAATTGCGTAGACGAAAGGACATATTATATATACAC CCTTCCCTCCCCTCCAAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5352#1      ------------------------------------------------------------
consensus_5352#2      ------------------------------------------------------------
consensus_5352#0      GGCAAAGAATCCCGCACGAGGTTAACACATGAACGGTATAGAGGCCATGATGGTGACTTT 60
                                                                                  

consensus_5352#1      ------------------------------------------------------------
consensus_5352#2      ------------------------------------------------------------
consensus_5352#0      CTATGACCCCGGTTTAGATCCGTACTGCTGTTTGTTGCCATCCTCTCAGGCATCATAAGG 120
                                                                                  

consensus_5352#1      ------------------------------------------------------------
consensus_5352#2      ------------------------------------------------------------
consensus_5352#0      CAGGCAGACAGACGCAAAGTCATGAAACATAAAGACTGTTTCTTAGAAACGTCGAACGTT 180
                                                                                  

consensus_5352#1      ------------------------------------------------------------
consensus_5352#2      ------------------------------------------------------------
consensus_5352#0      TCGAGCACACAGATCAGTCGATGTCAAAGCNACGGANTCGCCGGTGTTTTCAGCGGGAGG 240
                                                                                  

consensus_5352#1      ------------------------------------------------------------
consensus_5352#2      ------------------------------------------------------------
consensus_5352#0      GGCAAGACTAGGAGAGGGCGCCGAACAGACGGCGTTTNNACACGATCCGCCTGGNGCTGT 300
                                                                                  

consensus_5352#1      --------------------------------------------------CCCCGGCCCA 10
consensus_5352#2      ------------------------------------------------------------
consensus_5352#0      ACGGCNCNTGTGACGCCCCTTANTTNCTCTTGNGTCCCTACCCCANCGCCCCGCGTTCCG 360
                                                                                  

consensus_5352#1      CGTGAGAAAAGCGTCATCGTCCCTCCCCATATATAGCCGTCTTAAAAAAAAACAAAAACA 70
consensus_5352#2      ---------------------------------------------------CCAAGAAT- 8
consensus_5352#0      CACTNNGGGGGNNCCCACCCCTCGGNCGGAGGCCNGCAGTCNCGGNCTGCCTCGGCACTG 420
                                                                          *   *   

consensus_5352#1      GCTATCCTCAAG---TAAGATTAAATA--ATATCTGTGGTAGAGAGAATGAACA---CAT 122
consensus_5352#2      -TCGGCACGATG---GAAGATTAA-TA--ATATCTGTGGTAGAGAGAATGAACA---CAT 58
consensus_5352#0      CCNGCCGATANGCGTTAGTATTGCCCNCGACATCGAAAGANNACATNGCGNAAAGGGTAG 480
                           *   * *    *  ***       * ***    *   * *    * * *    * 

consensus_5352#1      GAAC-GGTATAGAGGCGATGATGGTGACTTTCTATGCCCCGGTTTAGATCCGTAC-TGCT 180
consensus_5352#2      GAAC-GGTATAGAGGCGATGATGGTGACTTTCTATGCCCCGGTTTAGATCCGTAC-TGCT 116
consensus_5352#0      GATNAGNTACGGGGGCGCGNGNATCNGCGACGTTCAGNCCNGTGCGGAACAGNACATGCC 540
                      **   * **  * ****          *    *     ** **   ** * * ** *** 

consensus_5352#1      GT----TTGTTGCCATCCTCTCAGGCATCATAAGGCAGGCAGCCAGACGCAAATCATGAA 236
consensus_5352#2      GT----TTGTTGCCATCCTCTCAGGCATCATAAGGCAGGCAGCCAGACGCAAATCATGAA 172
consensus_5352#0      GNAGCACCACCNCGACGGCCCCACGGCCCACAGCGGCAGCGNCCGGACCTTCACCGCGGG 600
                      *           * *    * ** *   ** *  *   **  ** ***    * *  *  

consensus_5352#1      ACATAAAGACTTTTCTTAGAAACTCGAACT-TTCGAGCACACGATCATCATTCAAACACG 295
consensus_5352#2      ACATAAAGACTTTTCTTAGAAACTCGAACT-TTCGAGCACACGATCATCATTCAAACACG 231
consensus_5352#0      CNTNACGAAGCTNTNGCNGCACCTCGGTCTGCNCCGACGCAGGACGACNAGGCNAGCATG 660
                          *   *  * *    * * ****  **   *   * ** **  *  *  * * ** *

consensus_5352#1      A----TCGCGGTTTAGGGAG--GGCAAGTAGAGAGCGCGAAACGCGTCAAACGA------ 343
consensus_5352#2      A----TCGCGGTTTAGGGAG--GGCAAGTAGAGAGCGCGAAACGCGTCAAACGA------ 279
consensus_5352#0      GGGGGCCATACGCGAGGCANTCNGCACAGAGGCGGCGCNGTGTNGCTGGGACGNTACGAT 720
                            *       *** *    ***   **   ****        *   ***       

consensus_5352#1      -ACGTGG-GTGTTTGTTTTGAGC----ATATTATATGATACTACAAAGCAAATGAGAT-- 395
consensus_5352#2      -ACGTGG-GTGTTTGTTTTGAGC----ATATTATATGATACTACAAAGCAAATGAGAT-- 331
consensus_5352#0      AGNGNGGTGNGCNNNCTCCGGGNGGCANCCGTNCCCGGGNCCACACACNGATCGTNGCTA 780
                         * ** * *     *  * *         *    *   * *** *   *  *      

consensus_5352#1      --AGGAACCACCTAGGGAGAGAGAGGGTGTGGGAAGCGTGTGTGTGCAGTGAAATTATGT 453
consensus_5352#2      --AGGAACCACCTAGGGAGAGAGAGGGTGTGGGAAGCGTGTGTGTGCAGTGAAATTATGT 389
consensus_5352#0      GCAGTAACNCGCTANAGGGAGGNAGGNGGGGCGAGGTGCGGNANTGCCGAGAAGGCGAAC 840
                        ** ***   ***  * ***  ***  * * ** * * *    *** * ***       

consensus_5352#1      A-TAGGGTAAAATATCTGTATCAAACAAAAAACCACACGAAGATCAGGAAATTT-GGAGG 511
consensus_5352#2      A-TAGGGTAAAATATCTGTATCAAACAAAAAACCACACGAAGATCAGGAAATTTTGGAGG 448
consensus_5352#0      AGTAAANCGCGAGANCCGG--CGNGNAGGTGATCGGACCANGNCCC---ACTNGCGNGCN 895
                      * **       * * * *   *    *    * *  ** * *  *    * *   *    

consensus_5352#1      GAAACATATAGAACTTGATAGTGAGAAATGCATATACACACATG-CACCGATAACACACA 570
consensus_5352#2      GAAACATATAGAACTTGATAGTGAGAAATGCATATACACACATG-CACCGATA-CACACA 506
consensus_5352#0      GGAACCAGTNNAAANCGACCAGNAGAACCCTNCGACCNGGCNAGTCNACGTTGGGANACA 955
                      * ***   *  **   **     ****         *   *  * *  ** *   * ***

consensus_5352#1      ATTGCGTAGACAGAAAGGACATATTATATATACACCCTTCCCTCCCCTCCAACCACTAAA 630
consensus_5352#2      ATTGCGTAGAC-GAAAGGACATATTATATATACACCCTTCCCTCCCCTCCAAC------- 558
consensus_5352#0      GGCACGTCAGAGGNNACCGCACAGC-CGGACGCAGCGCCNGCAGNCCCCNAGGCCCCCGA 1014
                          ***     *  *   ** *      *  ** *     *   ** * *         

consensus_5352#1      CAAGGTACTATATATACATATACACACAGCAGCATACACACTATAAATTATATAAAATTA 690
consensus_5352#2      ------------------------------------------------------------
consensus_5352#0      GGAGCCGGGGCNGCNGCCGACACNNTNCGCTACNANANNTCGGAGCANCGGCGANGGCCN 1074
                                                                                  

consensus_5352#1      TATACATTCGTCGTGTTGGAAGAAACTACCATTTTATTCAAAGTACCAGCAAATGGTGTG 750
consensus_5352#2      ------------------------------------------------------------
consensus_5352#0      GTCGAGCAAANCGNGNCNGCCNNGCCTCGNCCGCTAGGCNCNCCGGCAGGCGA-GGGGCA 1133
                                                                                  

consensus_5352#1      GGGTCGACGAAGACGACAATGGAATCGTGCAAAAACTAGGGGACTTGTAACTTGGCTGCT 810
consensus_5352#2      ------------------------------------------------------------
consensus_5352#0      GNNNCGNNAGGNAGTNTGACNATNCTGCGCNTNGAN-ANTGNGCTCAANGTAGCGTTTCC 1192
                                                                                  

consensus_5352#1      TTTAAGAAGAAACAAACACC---------------------------------------- 830
consensus_5352#2      ------------------------------------------------------------
consensus_5352#0      AATGCGACNCNNNTTGCATNTGTTAAGANGGNGANGGTGCGTGAANNACCNGAGNAAACN 1252
                                                                                  

consensus_5352#1      ------------------------------------------------------------
consensus_5352#2      ------------------------------------------------------------
consensus_5352#0      CACGAACNGGGNAGACNCACNGCCGGGCNANACACACCGCCGCGAGNGANGACGANCTGC 1312
                                                                                  

consensus_5352#1      ------------------------------------------------------------
consensus_5352#2      ------------------------------------------------------------
consensus_5352#0      CNNGATCGCCAGCCNACNCCGCNCCTGGAACGNGGNCACGAGNCNNGGCCCCGNGNNGCN 1372
                                                                                  

consensus_5352#1      ------------------------------------------------------------
consensus_5352#2      ------------------------------------------------------------
consensus_5352#0      GGCCNNCCNCGGCCGCGGGNCTGAGCAGCAAANNAGNNAGCNANNATACGATCAACGACN 1432
                                                                                  

consensus_5352#1      -------------------------------------------------
consensus_5352#2      -------------------------------------------------
consensus_5352#0      ANCGGACGCCNAGTCGANNNCNGCCGACCCTAAANCCANNAGNCGAANG 1481
                                                                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)