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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5355#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1279 fasta sequence
[CCGAGCTGCCAGAACGAAATCGCTTCACACAAAATTACACCCAAATTCGGCGCCCGAAATCGATAAGAAACCCGATCAACCATGACCGCGGACAGTGTGGATTTAGTGTGAAATCACAATTCTACCCATCGCCAGCAAAATGTGGTGATAGTTCTACGCAAAAGCCGCTCCTCCTCGGTGGTGGTGGTGGTGGTGGGTGTAGCGCACGCTTTTCTTTCCTTTTTTTTCGCTCTTCACTCTTGTTTACGAATCACGCGCTGCTCGGTGCCAGCTGGTGGCCATTTACGGTGCTAAATCTTCACCCTGCATCAGTGCGCATCACGATGGATGGCATGTGCTTCGATTACGATCACTACTTCGCGGAAGAAACGTTCATCATCGACGATTTCGGTGAGATCTGCGAGGATGTGGTCCGGATTGCCGGTGCGAGCTCGCTGCACCTTTGCAAGGATTTCGATGCGGAACTGCGCCGGCAGGAAAGCCCCCCTCCCGGTGGCTTTAACGCTGGCTCGAGCCGTTGCTTCGACAAGGAGGTATCGTCACTCTTCTCCGAGATGGAATACCTTACCGAAGTGTCGCCCGGGACGGATGTGGTGCTGTCGGACACGAGCGCCATTACGATTGCGGTCAATCCCAGCGAGTTTTCCTGCAAACGGCCCATCCGGCGGGAACCACCGGACGGAACGGGCGCACAGGAAGGTGGTGGGCAAAATGATGGTAAGGAAGCTTCAGCCGTACAGACACCCGAGCCAGACAAAACTGCTTCACCCCACCACCAGCAGGAACCGGCGGCGCACGGCAATCTGTCCCCTCCGGTAGAGTATCAGCGCATTTTGAACAATTACATTCAAAAGGGCCGCCGAAAGCTGGAAGCTAGCTCGTACTCCAAGATGAAAGCGTCCTGCCCGACCGGGGACCGATGGACGGCATCGGCACGACTATCTACCTCAGCGCTCGAAACGGTAACGGCGTCAATGCAACCGTCCGCTAAGACCACTTCCGGGTCCAGCCCAGCACCTGTCACTGCCATTGTCCCAAAGTTCGACCACCACAATCCTTCCGCCTCCATTAGACAAACGGTGAATATGATACAATCATCTCAACTGTCACCGCTCTTCCCATCGGTACAGCCGGCTGCCCAGAGCCGGACTGCTTCGTCGGTGCTGCTCAAACCGACACGATTGCATCACTGCCGGGATTGTGGGCTGTCGTACGCGTCCAGCGAGTCGCTGCGGAAGCACTGCTGCATCATCGCGGAACAGTACCAGTGGCATCTGTG]
[+] EMBL BM650257 [CCGAGCTGCCAGAACGAAATCGCTTCACACAAAATTACACCCAAATTCGGCGCCCGAAATCGATAAGAAACCCGATCAACCATGACCGCGGACAGTGTGGATTTAGTGTGAAATCACAATTCTACCCATCGCCAGCAAAATGTGGTGATAGTTCTACGCAAAAGCCGCTCCTCCTCGGTGGTGGTGGTGGTGGTGGGTGTAGCGCACGCTTTTCTTTCCTTTTTTTTCGCTCTTCACTCTTGTTTACGAATCACGCGCTGCTCGGTGCCAGCTGGTGGCCATTTACGGTGCTAAATCTTCACCCTGCATCAGTGCGCATCACGATGGATGGCATGTGCTTCGATTACGATCACTACTTCGCGGAAGAAACGTTCATCATCGACGATTTCGGTGAGATCTGCGAGGATGTGGTCCGGATTGCCGGTGCGAGCTCGCTGCACCTTTGCAAGGATTTCGATGCGGAACTGCGCCGGCAGGAAAGCCCCCCTCCCGGTGGCTTTAACGCTGGCTCGAGCCGTTGCTTCGACAAGGAGGTATCGTCACTCTTCTCCGAGATGGAATACCTTACCGAAGTGTCGCCCGGGACGGATGTGGTGCTGTCGGACACGAGCG ]
[+] EMBL BM608423 [ ccgGCCAGAACGAAATCGCTTCACACAAAATTACACCCAAATTCGGCGCCCGAAATCGATAAGAAACCCGATCAACCATGACCGCGGACAGTGTGGATTTAGTGTGAAATCACAATTCTACCCATCGCCAGCAAAATGTGGTGATAGTTCTACGCAAAAGCCGCTCCTCCTCGGTGGTGGTGGTGGTGGTGGGTGTAGCGCACGCTTTTCTTTCCTTTTTTTTCGCTCTTCACTCTTGTTTACGAATCACGCGCTGCTCGGTGCCAGCTGGTGGCCATTTACGGTGCTAAATCTTCACCCTGCATCAGTGCGCATCACGATGGATGGCATGTGCTTCGATTACGATCACTACTTCGCGGAAGAAACGTTCATCATCGACGATTTCGGTGAGATCTGCGAGGATGTGGTCCGGATTGCCGGTGCGAGCTCGCTGCACCTTTGCAAGGATTTCGATGCGGAACTGCGCCGGCAGGAAAGCCCCCCTCCCGGTGGCTTTAACGCTGGCTCGAGCCGTTGCTTCGACAAGGAGGTATCGTCACTCTTCTCCGAGATGGAATACCTTACCGAAGTGTCGCCCGGGACGGATGTGGTGCTGTCGGACACGAGCGCCATTACGATTGCGGTCAATCCCAGCGAGTTTTCCTGC ]
[+] EMBL BX610254 [ CGGACACGAGCGCCATTACGATTGCCGTCAATCCTAGCGAGTTTTCCTGCAAACGGCCCATCCGGCGGGAACCACCGGACGGAACGGGCGCACAGGAAGGTGGTGGGCAAAATGATGGTAAGGAAGCTTCAGCCGTACAGACACCCGAGCCAGACAAAACTGCTTCACCCCACCACCAGCAGGAACCGGCGGCGCACGGCAATCTGTCCCCTCCGGTAGAGTATCAGCGCATTTTGAACAATTACATTCAAAAGGGCCGCCGAAAGCTGGAAGCTAGCTCGTACTCCAAGATGAAAGCGTCCTGCCCGACCGGGGACCGATGGACGGCATCGGCACGACTATCTACCTCAGCGCTCGAAACGGTAACGGCGTCAATGCAACCGTCCGCTAAGACCACTTCCGGGTCCAGCCCAGCACCTGTCACTGCCATTGTCCCAAAGTTCGACCACCACAATCCTTCCGCCTCCATTAGACAAACGGTGAATATGATACAATCATCTCAACTGTCACCGCTCTTCCCATCGGTACAGCCGGCTGCCCAGAGCCGGACTGCTTCGTCGGTGCTGCTCAAACCGACACGATTGCATCACTGCCGGGATTGTGGGCTGTCGTACGCGTCCAGCGAGTCGCTGCGGAAGCACTGCTGCATCATCGCGGAACAGTACCAGTGGCATCTGTG]
consensusID : consensus_5355#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 687 fasta sequence
[GAATTGCCGAGGTNAAATTTCACCCAAATTCGGCGCCCGAAATCGATAAGAAACCGATCAACCATGACCGCGGACAGTGTGGATTTAGTGTGAAATCACAATTCTACCCATCGCCAGCAAAATGTGGTGATAGTTCTACGCAAAAGCCGCTCCTCCTCGGTGGTGGTGGTGGTGGTGGGTGTAGCTGCACGCTTTTCTTTCCTTTTTTTTCGCTCTTCACTCTTGTTTACGAATCACTGCTGCCGCTCGGTGCCAGCTGGTGGCCATTTACGGTGCTAAATCTTCCCCCGCATCAGTGCGCATCACGATGGATGGCATTGTGCTTCGATTACGATCACTACTTCGCGGAAGAAACGTTCATCATCGACGATTTCGGTGAGATCTTGCGAGGATGTGGTCCGGATTGCCGGTGCGAACTCGCTGCACCTTTGCAAGGATTTCGATGCGGAACTGCGCCGGCAGGAAAGCCCCCCTCCCGGTGGCTTTAACGCTGGCTCGAGCCGCTGCTTCGACAAGGAGGTATCGTCACTCTTCTCCGAGATGGNCATACTTTACCGAAGTGTACGCCCGGGACGGACTGTTGGTGCTGTCGCGGGACCACGAGCGCCATTTACGATTGCCGGTCAATCCTAGCGAAGTTNCCTGCCAACGGCCATCCGGGCGGNAACCCACCNGGAGGCACCGCGG]
[+] EMBL AL931841 [GAATTGCCGAGGTNAAATTTCACCCAAATTCGGCGCCCGAAATCGATAAGAAACCGATCAACCATGACCGCGGACAGTGTGGATTTAGTGTGAAATCACAATTCTACCCATCGCCAGCAAAATGTGGTGATAGTTCTACGCAAAAGCCGCTCCTCCTCGGTGGTGGTGGTGGTGGTGGGTGTAGCTGCACGCTTTTCTTTCCTTTTTTTTCGCTCTTCACTCTTGTTTACGAATCACTGCTGCCGCTCGGTGCCAGCTGGTGGCCATTTACGGTGCTAAATCTTCCCCCGCATCAGTGCGCATCACGATGGATGGCATTGTGCTTCGATTACGATCACTACTTCGCGGAAGAAACGTTCATCATCGACGATTTCGGTGAGATCTTGCGAGGATGTGGTCCGGATTGCCGGTGCGAACTCGCTGCACCTTTGCAAGGATTTCGATGCGGAACTGCGCCGGCAGGAAAGCCCCCCTCCCGGTGGCTTTAACGCTGGCTCGAGCCGCTGCTTCGACAAGGAGGTATCGTCACTCTTCTCCGAGATGGNCATACTTTACCGAAGTGTACGCCCGGGACGGACTGTTGGTGCTGTCGCGGGACCACGAGCGCCATTTACGATTGCCGGTCAATCCTAGCGAAGTTNCCTGCCAACGGCCATCCGGGCGGNAACCCACCNGGAGGCACCGCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5355#0 CCGAGCTGCCAGAACGAAATCGCTTCACACAAAATTACACCCAAATTCGGCGCCCGAAAT 60
consensus_5355#1 ----------------GAATTGCCG-AGGTNAAATTTCACCCAAATTCGGCGCCCGAAAT 43
*** ** * ***** ***********************
consensus_5355#0 CGATAAGAAACCCGATCAACCATGACCGCGGACAGTGTGGATTTAGTGTGAAATCACAAT 120
consensus_5355#1 CGATAAGAAACC-GATCAACCATGACCGCGGACAGTGTGGATTTAGTGTGAAATCACAAT 102
************ ***********************************************
consensus_5355#0 TCTACCCATCGCCAGCAAAATGTGGTGATAGTTCTACGCAAAAGCCGCTCCTCCTCGGTG 180
consensus_5355#1 TCTACCCATCGCCAGCAAAATGTGGTGATAGTTCTACGCAAAAGCCGCTCCTCCTCGGTG 162
************************************************************
consensus_5355#0 GTGGTGGTGGTGGTGGGTGTAGC-GCACGCTTTTCTTTCCTTTTTTTTCGCTCTTCACTC 239
consensus_5355#1 GTGGTGGTGGTGGTGGGTGTAGCTGCACGCTTTTCTTTCCTTTTTTTTCGCTCTTCACTC 222
*********************** ************************************
consensus_5355#0 TTGTTTACGAATCACG--CGCTGCTCGGTGCCAGCTGGTGGCCATTTACGGTGCTAAATC 297
consensus_5355#1 TTGTTTACGAATCACTGCTGCCGCTCGGTGCCAGCTGGTGGCCATTTACGGTGCTAAATC 282
*************** ** **************************************
consensus_5355#0 TTCACCCTGCATCAGTGCGCATCACGATGGATGGCAT-GTGCTTCGATTACGATCACTAC 356
consensus_5355#1 TTC-CCCCGCATCAGTGCGCATCACGATGGATGGCATTGTGCTTCGATTACGATCACTAC 341
*** *** ***************************** **********************
consensus_5355#0 TTCGCGGAAGAAACGTTCATCATCGACGATTTCGGTGAGATCT-GCGAGGATGTGGTCCG 415
consensus_5355#1 TTCGCGGAAGAAACGTTCATCATCGACGATTTCGGTGAGATCTTGCGAGGATGTGGTCCG 401
******************************************* ****************
consensus_5355#0 GATTGCCGGTGCGAGCTCGCTGCACCTTTGCAAGGATTTCGATGCGGAACTGCGCCGGCA 475
consensus_5355#1 GATTGCCGGTGCGAACTCGCTGCACCTTTGCAAGGATTTCGATGCGGAACTGCGCCGGCA 461
************** *********************************************
consensus_5355#0 GGAAAGCCCCCCTCCCGGTGGCTTTAACGCTGGCTCGAGCCGTTGCTTCGACAAGGAGGT 535
consensus_5355#1 GGAAAGCCCCCCTCCCGGTGGCTTTAACGCTGGCTCGAGCCGCTGCTTCGACAAGGAGGT 521
****************************************** *****************
consensus_5355#0 ATCGTCACTCTTCTCCGAGATGGA-ATACCTTACCGAAGTGT-CGCCCGGGACGGATG-- 591
consensus_5355#1 ATCGTCACTCTTCTCCGAGATGGNCATACTTTACCGAAGTGTACGCCCGGGACGGACTGT 581
*********************** **** ************ *************
consensus_5355#0 TGGTGCTGTCGGA----CACGAGCGCCATT-ACGATTGC-GGTCAATCCCAGCGAGTTTT 645
consensus_5355#1 TGGTGCTGTCGCGGGACCACGAGCGCCATTTACGATTGCCGGTCAATCCTAGCGAAGTTN 641
*********** ************* ******** ********* ***** **
consensus_5355#0 CCTGCAAACGGCCCATCCGGCGGGAACC-ACCGGACGGAACGGGCGCACAGGAAGGTGGT 704
consensus_5355#1 CCTGCCAACGGCCATCCGGGCGGNAACCCACCNGGAGGCACCGCGG-------------- 687
***** ******* * ***** **** *** * ** ** * *
consensus_5355#0 GGGCAAAATGATGGTAAGGAAGCTTCAGCCGTACAGACACCCGAGCCAGACAAAACTGCT 764
consensus_5355#1 ------------------------------------------------------------
consensus_5355#0 TCACCCCACCACCAGCAGGAACCGGCGGCGCACGGCAATCTGTCCCCTCCGGTAGAGTAT 824
consensus_5355#1 ------------------------------------------------------------
consensus_5355#0 CAGCGCATTTTGAACAATTACATTCAAAAGGGCCGCCGAAAGCTGGAAGCTAGCTCGTAC 884
consensus_5355#1 ------------------------------------------------------------
consensus_5355#0 TCCAAGATGAAAGCGTCCTGCCCGACCGGGGACCGATGGACGGCATCGGCACGACTATCT 944
consensus_5355#1 ------------------------------------------------------------
consensus_5355#0 ACCTCAGCGCTCGAAACGGTAACGGCGTCAATGCAACCGTCCGCTAAGACCACTTCCGGG 1004
consensus_5355#1 ------------------------------------------------------------
consensus_5355#0 TCCAGCCCAGCACCTGTCACTGCCATTGTCCCAAAGTTCGACCACCACAATCCTTCCGCC 1064
consensus_5355#1 ------------------------------------------------------------
consensus_5355#0 TCCATTAGACAAACGGTGAATATGATACAATCATCTCAACTGTCACCGCTCTTCCCATCG 1124
consensus_5355#1 ------------------------------------------------------------
consensus_5355#0 GTACAGCCGGCTGCCCAGAGCCGGACTGCTTCGTCGGTGCTGCTCAAACCGACACGATTG 1184
consensus_5355#1 ------------------------------------------------------------
consensus_5355#0 CATCACTGCCGGGATTGTGGGCTGTCGTACGCGTCCAGCGAGTCGCTGCGGAAGCACTGC 1244
consensus_5355#1 ------------------------------------------------------------
consensus_5355#0 TGCATCATCGCGGAACAGTACCAGTGGCATCTGTG 1279
consensus_5355#1 -----------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||