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Anopheles gambiae
cluster # 5437 cluster # 5437       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5437#0 length = 1136 sequences # 4  

consensusID : consensus_5437#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1136
fasta sequence
                              [AGAACATAGCACGTAAGTACTCGCCGGAGAAACGTAAACACAAGCTCCAGCGAGAGAGAGATTAGGGAAGTAGGGGAAAGGGAAAGCACGGAGAAGCGAGAGGAGGTTACCTCCCTCTTGTCGCCCACTTTCCGCCCCAAAGTTCTCGCTTAGGCCATTCGACTGAAATTCGTATCGTTTTTTAAAGGCGCTCGATTCGCATTACAGTAGGCGACGAACCCTCCCCCGTTTGACATAGCGTCTTATTGCATAAAAAAAACGAGAAAACAGGAACACACACACACAAGAAAAAACGAAAACAAACAAACAGATTGTCCCAACAATACATCGTTCAAACTCATTCAAGCAGTAGGCAGTAAGTACTTAATCGGTAAGACGAATCTTGGTGCCCAAACCTTAGCAGCTTGGAACGCGGAACACACACACACACATATATCTTAGTAGCTAAGCGTGATGCTAGTAAAACAAAACAAAAGGGAATGCAACCACGCGCAGAGTAGTCACAGCGGAGGGCCCGACAATTGTACGCCAGTAAGAGGGAGTAGAAAGAGAGGGAAATTTACATCCAATTTATCGATAGTTTGTACATACACAGATAAAAAGCGCATACGAAATCGTTATACTTTTCTTTTCGTTCATGTATTATAAAGCGTATAGGTTTATACATATATACATACAAACACACACAGACATGCATCCATATTAAAAATACAACTAGAGCTATATATACAAATAGAAATT-ATGCTTATAGATAGAGAAAAATAA-GAGA-GGAAAGAGCAAAA--CTCG-ACTGT-ATT-ATAA-A-CATATTTTTAACCTTCATCTTCCCTCCCCGGACTCT-CCATGCCAACCCCTCCCCGCGCATGT-TGTCCAGCTCGCGTNTCGATGGCGGGAAAGTGAACAGTGAGGTTGTAATTACCGTCATTATAGCGACAACAGCGACACTGTTCGGCTTACAGCCCTCCCCCAACCCTTCCCACCCTGCCGCATCGCATCCCCACCTGTGGAGCGGTACGGGGTGGGGACCACGTTATAGCTTAATTGGTAAGGGATCTAGCAGGCAGGCCGGAGCAGCTGCGGCACACGCAACATAGACTCAAGCAGACGGCAAAGCGAGCGCCCTCGAGCTCCTTCCGCCCACC]

[+] EMBL BX616394             [AGAACATAGCACGTAAGTACTCGCCGGAGAAACGTAAACACAAGCTCCAGCGAGAGAGAGATTAGGGAAGTAGGGGAAAGGGAAAGCACGGAGAAGCGAGAGGAGGTTACCTCCCTCTTGTCGCCCACTTTCCGCCCCAAAGTTCTCGCTTAGGCCATTCGACTGAAATTCGTATCGTTTTTTAAAGGCGCTCGATTCGCATTACAGTAGGCGACGAACCCTCCCCCGTTTGACATAGCGTCTTATTGCATAAAAAAAACGAGAAAACAGGAACACACACACACAAGAAAAAACGAAAACAAACAAACAGATTGTCCCAACAATACATCGTTCAAACTCATTCAAGCAGTAGGCAGTAAGTACTTAATCGGTAAGACGAATCTTGGTGCCCAAACCTTAGCAGCTTGGAACGCGGAACACACACACACACATATATCTTAGTAGCTAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AL934569             [                                                                                                                                                                                                                                                             ggcccagGAGAAAACAGGAACACACACACACAAGAAAAAACGAAAACAAAC AACAGATTGTCCCAACAATACATCGTTCAAACTCATTCAAGCAGTAGGCAGTAAGTACTTAATCGGTAAGACGAATCTTGGTGCCCAAACCTTAGCAGCTTGGAACGCGGAACACACACACACACATATATCTTAGTAGCTAAGCGTGATGCTAGTAAAACAAAACAAAAGGGAATGCAACCACGCGCAGAGTAGTCACAGCGGAGGGCCCGACAATTGTACGCCAGTAAGAGGGAGTAGAAAGAGAGGGAAATTTACATCCAATTTATCGATAGTTTGTACATACACAGATAAAAAGCGCATACGAAATCGTTATACTTTTCTTTTCGTTCATGTATTATAAAGCGTATAGGTTTATACATATATACATACAAACACACACAGACATGCATCCATATTAAAAATACAACTAGAGCTATATATNCAAATAGAAATTCATGCTTATAGATAGAGAAAAATAACGAGAGGGAAAGAGCAAAAACCTCGAACTGTGATTCATAACACCATATTTNTAACCTTCATCTTCCCTCCCCGGAATCTCCCATGCAAACCCCTCCCCGGGCATGTCTGTCCAGCTCGCGTNTCGATGGCGGGAAAGTGAACAGTGAG                                                                                                                                                                                                                                          ]
[+] EMBL BX620329             [                                                                                                                                                                                                                                                                            AGGAACACACACACACAAGAAAAAACGAAAACAAACAAACAGATTGTCCCAACAATACATCGTTCAAACTCATTCAAGCAGNAGGNAGTAAGTACTTAATCGGTAAGACGAATCTTGGTGCCCAAACCTTAGCAGCTTGGAACGCGGAACACACACACACACATATATCTTAGTAGCTAAGCGTGATGCTAGTAAAACAAAACAAAAGGGAATGCAACCACGCGCAGAGTAGTCACAGCGGAGGGCCCGACAATTGTACGCCAGTAAGAGGGAGTAGAAAGAGAGGGAAATTTACATCCAATTTATCGATAGTTTGTACATACACAGATAAAAAGCGCATACGAAATCGTTATACTTTTCTTTTCGTTCATGTATTATAAAGCGTATAGGTTTATACATATATACATACAAACACACACAGACATGCATCCATATTAAAAATACAACTAGAGCTATATATACAAATAGAAATT ATGCTTATAGATAGAGAAAAATAA GAGA GGAAAGAGCAAAA  CTCG ACTGT ATT ATAA A CATATTTTTAACCTTCATCTTCCCTCCCCCGACTCT CCATGCCAACCCCTCCCCGCGCATGT TGGTCAGC                                                                                                                                                                                                                                                                           ]
[+] EMBL BX616757             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATCGATAGTTTGTACATACACAGATAAAAAGCGCATACGAAATCGTTATACTTTTCTTTTCGTTCATGTATTATAAAGCGTATAGGTTTATACATATATACATACAAACACACACAGACATGCATCCATATTAAAAATACAACTAGAGCTATATATACAAATAGAAATT ATGCTTATAGATAGAGAAAAATAA GAGA GTAAAGAGCAAAA  CTCG ACTGT ATT ATAA A CATATTTTTAACCTTCATCTTCCCTCCCC GACTCT CCATGCCAACCCCTCCCCGCGCATGT TGT CAGCTCGCGTCTCGAT GCGGGAAAGTGAA AGTGATGTTGTAATTACCGTCATTATAGCGACAACAGCGACACTGTTCGGCTTACAGCCCTCCCCCAACCCTTCCCACCCTGCCGCATCGCATCCCCACCTGTGGAGCGGTACGGGGTGGGGACCACGTTATAGCTTAATTGGTAAGGGATCTAGCAGGCAGGCCGGAGCAGCTGCGGCACACGCAACATAGACTCAAGCAGACGGCAAAGCGAGCGCCCTCGAGCTCCTTCCGCCCACC]


>consensus_5437#0 AGAACATAGCACGTAAGTACTCGCCGGAGAAACGTAAACACAAGCTCCAGCGAGAGAGAG ATTAGGGAAGTAGGGGAAAGGGAAAGCACGGAGAAGCGAGAGGAGGTTACCTCCCTCTTG TCGCCCACTTTCCGCCCCAAAGTTCTCGCTTAGGCCATTCGACTGAAATTCGTATCGTTT TTTAAAGGCGCTCGATTCGCATTACAGTAGGCGACGAACCCTCCCCCGTTTGACATAGCG TCTTATTGCATAAAAAAAACGAGAAAACAGGAACACACACACACAAGAAAAAACGAAAAC AAACAAACAGATTGTCCCAACAATACATCGTTCAAACTCATTCAAGCAGTAGGCAGTAAG TACTTAATCGGTAAGACGAATCTTGGTGCCCAAACCTTAGCAGCTTGGAACGCGGAACAC ACACACACACATATATCTTAGTAGCTAAGCGTGATGCTAGTAAAACAAAACAAAAGGGAA TGCAACCACGCGCAGAGTAGTCACAGCGGAGGGCCCGACAATTGTACGCCAGTAAGAGGG AGTAGAAAGAGAGGGAAATTTACATCCAATTTATCGATAGTTTGTACATACACAGATAAA AAGCGCATACGAAATCGTTATACTTTTCTTTTCGTTCATGTATTATAAAGCGTATAGGTT TATACATATATACATACAAACACACACAGACATGCATCCATATTAAAAATACAACTAGAG CTATATATACAAATAGAAATTATGCTTATAGATAGAGAAAAATAAGAGAGGAAAGAGCAA AACTCGACTGTATTATAAACATATTTTTAACCTTCATCTTCCCTCCCCGGACTCTCCATG CCAACCCCTCCCCGCGCATGTTGTCCAGCTCGCGTNTCGATGGCGGGAAAGTGAACAGTG AGGTTGTAATTACCGTCATTATAGCGACAACAGCGACACTGTTCGGCTTACAGCCCTCCC CCAACCCTTCCCACCCTGCCGCATCGCATCCCCACCTGTGGAGCGGTACGGGGTGGGGAC CACGTTATAGCTTAATTGGTAAGGGATCTAGCAGGCAGGCCGGAGCAGCTGCGGCACACG CAACATAGACTCAAGCAGACGGCAAAGCGAGCGCCCTCGAGCTCCTTCCGCCCACC



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)