Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 5490 cluster # 5490       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5490#0 length = 1000 sequences # 4  

consensusID : consensus_5490#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1000
fasta sequence
                              [CTTCTCGGCTTGTGCGACCGTCGCTCGTGCATTGTTCCAGTCCGCCGGCGTATTTCTATTCTTTTTGGCAAAATGAAGCGGAAATCAGAAGGAGGCAATAAACAACCTTTCCAGCGGAAAAAGACGGAGCTGGTATTTGATCCACAGAAAAGGGTAGAGTTTCTGACTGGATTCCACAAACGTAAGCAGCATCGTAAAAAAATTGCGCAGGGGGAAATGCAACGTAAACTTAAGGAGGAGACGAAGCGGATACGCGCAGAGGCGAAAGAAAAGATGCGTAATCTCTACCATTCGTACAAACCAATCCCAGAGCTCACGGAGGAGGATAAAGCGGAGGAGCAGGAAGACGAGTACGATACAGAGAATGTTACTGTGAAAGTGGTGGAACTCTCTACTCGCGATCTGGCAAAGGAAAACAATTGGATCGGCGAAAATCGTGGCATGGTGAAGGACGAAGAATCGGATGCGGAAAACTCGAGCGACGATGGAAATGATGAGCAGCAACTGGGAGTTGTGCCCGGCATGGAGCTGGAGGGAGAGAAGAAGACCAAGCGCAAGCATAAACTGTCCGCCGAAGAAGGCTCATCGAACGAGGCGGAAAACGGGGAGAGCGCCGTGAAGGAAAAGGCGAAACCGAAGAAAGGACCAGTTCTCAACTTGGACGGTATACGGTCAAAGAAGGATCTGAATCATAAGATAAAACGCTACGCGCTGAAATCCATGAAGACAAGTCAAGCCTTCCGACAGAAGACGCGCCTTCAACAGCAAAAGCAGCTAAAACAATCCCGACGCATCCGTCACCAGAAGGAGAAACACCTGAAACAGAAGAAAGGCTTCAACAAACACCGTAACGGAAACGATCGCGGCGAAACTAAGCGAAAACGAAAGGACGACTAAGAACATCTGCGTCCAGGGCAGT-GGGGGGGGGGAGGGGCTATGAAGAATCAGGATTAATAAATGATCGATCGCTATTGTTCAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CNS096UM             [CTTCTCGGCTTGTGCGACCGTCGCTCGTGCATTGTTCCAGTCCGCCGGCGTATTTCTATTCTTTTTGGCAAAATGAAGCGGAAATCAGAAGGAGGCAATAAACAACCTTTCCAGCGGAAAAAGACGGAGCTGGTATTTGATCCACAGAAAAGGGTAGAGTTTCTGACTGGATTCCACAAACGTAAGCAGCATCGTAAAAAAATTGCGCAGGGGGAAATGCAACGTAAACTTAAGGAGGAGACGAAGCGGATACGCGCAGAGGCGAAAGAAAAGATGCGTAATCTCTACCATTCGTACAAACCAATCCCAGAGCTCACGGAGGAGGATAAAGCGGAGGAGCAGGAAGACGAGTACGATACAGAGAATGTTACTGTGAAAGTGGTGGAACTCTCTACTCGCGATCTGGCAAAGGAAAACAATTGGATCGGCGAAAATCGTGGCATGGTGAAGGACGAAGAATCGGATGCGGAAAACTCGAGCGACGATGGAAATGATGAGCAGCAACTGGGAGTTGTGCCCGGCATGGAGCTGGAGGGAGAGAAGAAGACCAAGCGCAAGCATAAACTGTCCGCCGAAGAAGGCTCATCGAACGAGGCGGAAAACGGGGAGAGCGCCGTGAAGGAAAAGGCGAAACCGAAGAAAGGACCAGTTCTCAACTTGGACGGTATACGGTCAAAGAAGGATCTGAATCATAAGATAAAACGCTACGCGCTGAAATCCATGAAGACAAGTCAAGCCTTCCGACAGAAGACGCGCCTTCAACAGCAAAAGCAGCTAAAACAATCCCGACGCATCCGTCACCAGAAGGAGAAACACCTGAAACAGAAGAAAGGCTTCAACAAACACCGTAACGGAAACGATCGCGGCGAAACTAAGCGAAAACGAAAGGACGACTAAGAACATCTGCGTCCAGGGCAGT ACCGGGGGGGAGGGGCTATGAAGAATCAGGATTAATAAATGATCGATCGCTATTGTTCAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CNS092L7             [         TTGTGCGACCGTCGCTCGTGCATTGTTCCAGTCCGCCGGCGTATTTCTATTCTTTTTGGCAAAATGAAGCGGAAATCAGAAGGAGGCAATAAACAACCTTTCCAGCGGAAAAAGACGGAGCTGGTATTTGATCCACAGAAAAGGGTAGAGTTTCTGACTGGATTCCACAAACGTAAGCAGCATCGTAAAAGAATTGCGCAGGGGGAAATGCAACGTAAACTTAAGGAGGAGACGAAGCGGATACGCGCAGAGGCGAAAGAAAAGATGCGTAATCTCTACCATTCGTACAAACCAATCCCAGAGCTCACGGAGGAGGATAAAGCGGAGGAGCAGGAAGACGAGTACGATACAGAGAATGTTACTGTGAAAGTGGTGGAACTCTCTACTCGCGATCTGGCAAAGGAAAACAATTGGATCGGCGAAAATCGTGGCATGGTGAAGGACGAAGAATCGGATGCGGAAAACTCGAGCGACGATGGAAATGATGAGCAGCAACTGGGAGTTGTGCCCGGCATGGAGCTGGAGGGAGAGAAGAAGACCAAGCGCAAGCATAAACTGTCCGCCGAAGAAGGCTCATCGAACGAGGCGGAAAACGGGGAGAGCGCCGTGAAGGAAAAGGCGAAACCGAAGAAAGGACCAGTTCTCAACTTGGACGGTATACGGTCAAAGAAGGATCTGAATCATAAGATAAAACGCTACGCGCTGAAATCCATGAAGACAAGTTAAGCCTTCCGACAGAAGACGCGCCTTCAACAGCAAAAGCAGCTAAAACAATCCCGACGCATCCGTCACCAGAAGGAGAAACACCTGAAACAGAAGAAAGGCTTCAACAAACACCGTAACGGAAACGATCGCGGCGAAACTAAGCGAAAACGAAAGGACGACTAAAAACATCTGCGTCCAGGGCAGTGGGGGGGGGGGAGGGGCTATGAAGAATCAGGATTAATAAATGATCGAAAACTATTTTTCAAAAAAAAAAA            ]
[-] EMBL CNS092L8             [                                                  TATTTCTATTCTTTTTGGCAAAATGAAGCGGAAATCAGAAGGAGGCAATAAACAACCTTTCCAGCGGAAAAAGACGGGGCTGGTATTTGATCCACAGAAAAGGGTAGAGTTTCTTACTGGATTCCACAAACGTAAGCAGCATCGTAAAAAAATTGCGCAGGGGGAAATGCAACGTAAACTTAAGGGGGAGACGAAGGGGAAACGCGGAAAGGCGAAAGAAAAGATGCGTAATTTCTCCCATTCGTACAAACCAATCCCAGGGCTTACGGAGGAGGATAAAGCGGAGGGGCAGGAAAACGAGTACGAAACAGAAAATGTTACTGTGAAAGTGGTGGGACTCTCCACTCGCGGTCTGGCAAAGGAAAAAAATTGGATCGGCGAAAATCGTGGCATGGTAAAGGACGAAAAATCGGATGCGGAAAACTCGAGCGACGATGGAAATGATGAGCAGCAACTGGGAGTTGTGCCCGGCATGGGGCTGGAGGGAGAGAAGAAGACCAAGGGCAAGCATAAACTTTCCCCCGAAGAAGGGTCATCGAACGAGGCGGAAAACGGGGAGAGCGCCGTGAAGGGAAAGGCGAAACCGAAGAAAGGACCAGTTCTCCACTTGGACGGTATACGGTCAAAGAAGGATCTTAATCATAAGATAAAA ACTACGCGCTGAAATCCATGAAGACAAGTCAAGCCTTCCCACAGAAAACGCGCCTTCAACAGCAAAAGCAGCTAAAAAAATCCCGACGCATCCGTCACCAGAAGGAGAAACACCTGAAACAGAAGAAAGGCTTCAACAAACACCGTAACGGAAACGATCCCCGCGAAACTAAGCGAAAACGAAAGGACGACTAAGAA                                                                                                     ]
[-] EMBL CNS096UN             [                                                                                                      CAACCTTTCCAGCGGAAAAAGACGGAGCTGGTATTTGATCCACAGAAAAGGGTAGAGTTTCTTACTGGATTCCACAAACGTAAGCAGCATCGTAAAAAAATTGCGCAGGGGGAAATGCAACGTAAACTTAAGGAGGAGACGAAGCGGATACGCGCAGAGGCGAAAGAAAAGATGCGTAATCTCTACCATTCGTAAAAACCAATCCCAGAGCTCACGGAGGAGGATAAAGCGGAGGAGCAGGAAGACGAGTACGATACAGAGAATGTTACTGTGAAAGTGGTGGAACTCTCTACTCGCGATCTGGCAAAGGAAAACAATTGGATCGGCGAAAATCGTGGCATGGTGAAGGACGAAGAATCGGATGCGGAAAACTCGAGCGACGATGGAAATGATGAGCAGCAACTGGGAGTTGTGCCCGGCATGGAGCTGGAGGGAGAGAAGAAGACCAAGCGCAAGCATAAACTGTCCGCCGAAGAAGGCTCATCGAACGAGGCGGAAAACGGGGAGAGCGCCGTGAAGGAAAAGGCGAAACCGAAGAAAGGACCAGTTCTCAACTTGGACGGTATACGGTCAAAGAAGGATCTGAATCATAAGATAAAA ACTACGCGCTGAAATCCATGAAGACAAGTCAAGCCTTCCGACAGAAGACGCGCCTTCAACAGCAAAAGCAGCTAAAACAATCCCGACGCATCCGTCACCAGAAGGAGAAACACCTGAAACAGAAGAAAGGCTTCAACAAACACCGTAACGGAAACGATCGCGGCGAAACTAAGCGAAAACGAAAGGACGACTAAGAACATCTGCGTCCAGGGCAGT GGGGGGGGGGAGGGGCTATGAAGAATCAGGATTAATAAATGATCGATCGCTATTGTTAACAAAAAAAAAAAAA        ]


>consensus_5490#0 CTTCTCGGCTTGTGCGACCGTCGCTCGTGCATTGTTCCAGTCCGCCGGCGTATTTCTATT CTTTTTGGCAAAATGAAGCGGAAATCAGAAGGAGGCAATAAACAACCTTTCCAGCGGAAA AAGACGGAGCTGGTATTTGATCCACAGAAAAGGGTAGAGTTTCTGACTGGATTCCACAAA CGTAAGCAGCATCGTAAAAAAATTGCGCAGGGGGAAATGCAACGTAAACTTAAGGAGGAG ACGAAGCGGATACGCGCAGAGGCGAAAGAAAAGATGCGTAATCTCTACCATTCGTACAAA CCAATCCCAGAGCTCACGGAGGAGGATAAAGCGGAGGAGCAGGAAGACGAGTACGATACA GAGAATGTTACTGTGAAAGTGGTGGAACTCTCTACTCGCGATCTGGCAAAGGAAAACAAT TGGATCGGCGAAAATCGTGGCATGGTGAAGGACGAAGAATCGGATGCGGAAAACTCGAGC GACGATGGAAATGATGAGCAGCAACTGGGAGTTGTGCCCGGCATGGAGCTGGAGGGAGAG AAGAAGACCAAGCGCAAGCATAAACTGTCCGCCGAAGAAGGCTCATCGAACGAGGCGGAA AACGGGGAGAGCGCCGTGAAGGAAAAGGCGAAACCGAAGAAAGGACCAGTTCTCAACTTG GACGGTATACGGTCAAAGAAGGATCTGAATCATAAGATAAAACGCTACGCGCTGAAATCC ATGAAGACAAGTCAAGCCTTCCGACAGAAGACGCGCCTTCAACAGCAAAAGCAGCTAAAA CAATCCCGACGCATCCGTCACCAGAAGGAGAAACACCTGAAACAGAAGAAAGGCTTCAAC AAACACCGTAACGGAAACGATCGCGGCGAAACTAAGCGAAAACGAAAGGACGACTAAGAA CATCTGCGTCCAGGGCAGTGGGGGGGGGGAGGGGCTATGAAGAATCAGGATTAATAAATG ATCGATCGCTATTGTTCAAAAAAAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)