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Anopheles gambiae
cluster # 5514 cluster # 5514       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5514#0 length = 1829 sequences # 4  

consensusID : consensus_5514#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1829
fasta sequence
                              [CCGGTTTGTGGTCCACAAGTTAAGCGTGAGCGCAAAATTTAACCTTAAACTTATGTGTGTGTGGGTATGCTTTCGGATTCGGATTAGCAGCAAGTTTCGCAAGTATAAATTAAACGGTAGAAGACTCATTGTTCGAGCAGAGTTAAAAAAAAAAAACAAAACATTTGTAGCATTAATTACCACACGCGTAACAAGTTTTTGTGTAATGAAGCAAACAAAAAAATAGAAGAAAACAAACAAACCCCGAAACAGGACTCGTTGGATTTTTTGTGAATTGCTTATTCTTTCACTCCTAAAACAACAAAAATTATAACGTTTAATCAGGGGGAGGTAAACAAAAATGTTCCAATGTTTGATTGTGAGAAACAAAAACCAGACGAAAACGTAAATAGGTTAACGAAATTAATCTCACCCAATTAACAAACAAAAACAATTTAAAAAAAAACAAACTAAAACAACATTGTGTTTGGTAGAGTTTTTGCTAGAGATCCCTTTCTAGTTGCAGCGGAATGAAAGAGGCAGTGGCGCTCGCTACACACTAGAGAGAGAGGGAGAGAATTTAAACGTTACTTAGAACAGGATGCTCGTGCTCGTGCGCATTTCGAGCATTTAGTTTTAGTGAGTTTTATTGCCTTTAGAGCGCTCCCTGTTCCGTGCGTACGGCTTTGTACGGTGGCGATATAGTTTTTACTACTACAAACCAGAGGGTGCAGTTGTTTCTCATTCATTACTTGGCCCCATCGGTCCGGCATCGCAGCATTTAGGCAGTGCGCAAAGAGACAAGACACACAAGCATCAGGACAATTTGCGTAGAAACATTTGCAAATCTTTCGTTTTTTGTAGCTGTTGAACATTTTCCTTCAATCGTGTAACAAAAGCCGCTTACTACCCGCTCCATTCGAGAAATGAATGGTCAAAGGATCATTTACATAGAAATCCACTCTTGACCGTTGCTTACTTACGAACAAACAACACAACACAACAAAATGGAACAAACACAGTAAAGTAAACAAAGACGCATGGCACAATAGTAAAACAACACAGAGACCCTATTTCCCCGCCCCCAAAAATCCGTTCGTTAGAAACTCAGCTGCTCATCAAAGACCGCATACATATCGTGCAACATAGCCTAGTGTCTCAGACGCCGAGAAGAGGAGAGAGAAGAGTGAACCAGTTAAGATAAATCATGTGAAGCTGACGCCCAGCGAGGCGGCAGCAGGTGTGTGCAATTGGAGAGAAAGAGATAGTGAGGGAGAGAGAGATAATGAGAGAGAGAGAAGGAGAGAGATAGTAAAATAAAAGAAATAACCCCGNTTCACAAATCCGTGTCCTTAACACTGTACGGNCGCCTAGTACTGG-AAGCGTAGTAAAGCGTTACTAACGCGCAATTGGCGCGC-AAACTGCGCGCAAATCACGCGTCAATCACGCGGTGGTGTTAAAAAGAGCCTTCCCTCTTCACCTTCCATTGCTATCACATCCCCGAACGTTGTCAATTATTTCTGACGAGCTTTTCTGGTTTCCTGTGCAACCTGGACAATGCTTTGGACACTCTTTCGTTGCTCGAGAAGCACGGCTGACAACACGCGCTTATGATCCGCTCTGCGCAAAGCGTTTGCGTACACAGAAGGAGAAGGAGAAGGCCCACGTGGTGCGTGCGCGCGCACGCTGTAATGCACCGTTCCTTGCAATACACAGACAGAGAACGTTTTCGGAGGCATTTGAATGTGAAGGAAGTAGGCCGTAGAAACGGCAACGGAAGCTGTGGGAACGTGTTATTCTTTTCGTTTCTTTTTTAAGGTGATACAATAAAGCAGGAAAATACAGATTGC]

[+] EMBL BM652643             [CCGGTTTGTGGTCCACAAGTTAAGCGTGAGCGCAAAATTTAACCTTAAACTTATGTGTGTGTGGGTATGCTTTCGGATTCGGATTAGCAGCAAGTTTCGCAAGTATAAATTAAACGGTAGAAGACTCATTGTTCGAGCAGAGTTAAAAAAAAAAAACAAAACATTTGTAGCATTAATTACCACACGCGTAACAAGTTTTTGTGTAATGAAGCAAACAAAAAAATAGAAGAAAACAAACAAACCCCGAAACAGGACTCGTTGGATTTTTTGTGAATTGCTTATTCTTTCACTCCTAAAACAACAAAAATTATAACGTTTAATCAGGGGGAGGTAAACAAAAATGTTCCAATGTTTGATTGTGAGAAACAAAAACCAGACGAAAACGTAAATAGGTTAACGAAATTAATCTCACCCAATTAACAAACAAAAACAATTTAAAAAAAAACAAACTAAAACAACATTGTGTTTGGTAGAGTTTTTGCTAGAGATCCCTTTCTAGTTGCAGCGGAATGAAAGAGGCAGTGGCGCTCGCTACACACTAGAGAGAGAGGGAGAGAATTTAAACGTTACTTAGAACAGGATGCTCGTGCTCGTGCGCATTTCGAGCATTTAGTTTTAGTGAGTTTTATTGCCTTTAGAGCGCTCCCTGTTCCGTGCGTACGGCTTTGTACGGTGGCGATATAGTTTTTACTACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX621298             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGCTCGTGCGCATTTCGAGCATTTAGTTTTAGTGAGTTTTATTGCCTTTAGAGCGCTCCCTGTTCCGTGCGTACGGCTTTGTACGGTGG GATATAGTTTTTACTACTACAAACCAGAGGGTGCAGTTGTTTCTCATTCATTACTTGGCCCCATCGGTCCGGCATCGCAGCATTTAGGCAGTGCGCAAAGAGACAAGACACACAAGCATCAGGACAATTTGCGTAGAAACATTTGCAAATCTTTCGTTTTTTGTAGCTGTTGAACATTTTCCTTCAATCGTGTAACAAAAGCCGCTTACTACCCGCTCCATTCGAGAAATGAATGGTCAAAGGATCATTTACATAGAAATCCACTCTTGACCGTTGCTTACTTACGAACAAACAACACAACACAACAAAATGGAACAAACACAGTAAAGTAAACAAAGACGCATGGCACAATAGTAAAACAACACAGAGACCCTATTTCCCCGCCCCCAAAAATCCGTTCGTTAGAAACTCAGCTGCTCATCAAAGACCGCATACATATCGTGCAACATAGCCTAGTGTCTCAGACGCCGAGAAGAGGAGAGAGAAGAGTGAACCAGTTAAGATAAATCATGTGAAGCTGACGCCCAGCGAGGCGGCAGCAGGTGTGTGCAATTGGAGAGAAAGAGATAGTGAGGGAGAGAGAGATAATGAGAGAGAGAGAAGGAGAGAGATAGTAAAATAAAAGAAATAACCCCGNTTCACAAATCCGTGTCCTTAACACTGTACGGNCGCCTAGTACTGG AAGCGTAGTAAAGCGTTACTAACGCGCAATTGGCGCGC AAACTGCGCG                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX607964             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GAACATTTTCCTTCAATCGTGTAACAAAAGCCGCTTACTACCCGCTCCATTCGAGAAATGAATGGTCAAAGGATCATTTACATAGAAATCCACTCTTGACCGTTGCTTACTTACGAACAAACAACACAACACAACAAAATGGAACAAACACAGTAAAGTAAACAAAGACGCATGGCACAATAGTAAAACAACACAGAGACCCTATTTCCCCGCCCCCAAAAATCCGTTCGTTAGAAACTCAGCTGCTCATCAAAGACCGCATACATATCGTGCAACATAGCCTAGTGTCTCAGACGCCGAGAAGAGGAGAGAGAAGAGTGAACCAGTTAAGATAAATCATGTGAAGCTGACGCCCAGCGAGGCGGCAGCAGGTGTGTGCAATTGGAGAGAAAGAGATAGTGAGGGAGAta                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX616971             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGTTCGTTAGAAACTCAGCTGCTCATCATAGACCGCATACATATCGTGCAACATAGCCTAGTGTCTCAGACGCCGAGAAGAGGAGAGAGAAGAGTGAACCAGTTAAGATAAATCATGTGAAGCTGACGCCCAGCGAGGCGGCAGCAGGTGTGTGCAATTGGAGAGAAAGAGATAGTGAGGGAGAGAGAGATAATGAGAGAGAGAGAAGGAGAGAGATAGTAAAATAAAAGAAATAACCCCGTTTCACAAATCCGTGTCCTTAACACTGTACGGCCGCCTAGTACTGGAAAGCGTAGTAAAGCGTTACTAACGCGCAATTGGCGCGCAAAACTGCGCGCAAATCACGCGTCAATCACGCGGTGGTGTTAAAAAGAGCCTTCCCTCTTCACCTTCCATTGCTATCACATCCCCGAACGTTGTCAATTATTTCTGACGAGCTTTTCTGGTTTCCTGTGCAACCTGGACAATGCTTTGGACACTCTTTCGTTGCTCGAGAAGCACGGCTGACAACACGCGCTTATGATCCGCTCTGCGCAAAGCGTTTGCGTACACAGAAGGAGAAGGAGAAGGCCCACGTGGTGCGTGCGCGCGCACGCTGTAATGCACCGTTCCTTGCAATACACAGACAGAGAACGTTTTCGGAGGCATTTGAATGTGAAGGAAGTAGGCCGTAGAAACGGCAACGGAAGCTGTGGGAACGTGTTATTCTTTTCGTTTCTTTTTTAAGGTGATACAATAAAGCAGGAAAATACAGATTGC]


>consensus_5514#0 CCGGTTTGTGGTCCACAAGTTAAGCGTGAGCGCAAAATTTAACCTTAAACTTATGTGTGT GTGGGTATGCTTTCGGATTCGGATTAGCAGCAAGTTTCGCAAGTATAAATTAAACGGTAG AAGACTCATTGTTCGAGCAGAGTTAAAAAAAAAAAACAAAACATTTGTAGCATTAATTAC CACACGCGTAACAAGTTTTTGTGTAATGAAGCAAACAAAAAAATAGAAGAAAACAAACAA ACCCCGAAACAGGACTCGTTGGATTTTTTGTGAATTGCTTATTCTTTCACTCCTAAAACA ACAAAAATTATAACGTTTAATCAGGGGGAGGTAAACAAAAATGTTCCAATGTTTGATTGT GAGAAACAAAAACCAGACGAAAACGTAAATAGGTTAACGAAATTAATCTCACCCAATTAA CAAACAAAAACAATTTAAAAAAAAACAAACTAAAACAACATTGTGTTTGGTAGAGTTTTT GCTAGAGATCCCTTTCTAGTTGCAGCGGAATGAAAGAGGCAGTGGCGCTCGCTACACACT AGAGAGAGAGGGAGAGAATTTAAACGTTACTTAGAACAGGATGCTCGTGCTCGTGCGCAT TTCGAGCATTTAGTTTTAGTGAGTTTTATTGCCTTTAGAGCGCTCCCTGTTCCGTGCGTA CGGCTTTGTACGGTGGCGATATAGTTTTTACTACTACAAACCAGAGGGTGCAGTTGTTTC TCATTCATTACTTGGCCCCATCGGTCCGGCATCGCAGCATTTAGGCAGTGCGCAAAGAGA CAAGACACACAAGCATCAGGACAATTTGCGTAGAAACATTTGCAAATCTTTCGTTTTTTG TAGCTGTTGAACATTTTCCTTCAATCGTGTAACAAAAGCCGCTTACTACCCGCTCCATTC GAGAAATGAATGGTCAAAGGATCATTTACATAGAAATCCACTCTTGACCGTTGCTTACTT ACGAACAAACAACACAACACAACAAAATGGAACAAACACAGTAAAGTAAACAAAGACGCA TGGCACAATAGTAAAACAACACAGAGACCCTATTTCCCCGCCCCCAAAAATCCGTTCGTT AGAAACTCAGCTGCTCATCAAAGACCGCATACATATCGTGCAACATAGCCTAGTGTCTCA GACGCCGAGAAGAGGAGAGAGAAGAGTGAACCAGTTAAGATAAATCATGTGAAGCTGACG CCCAGCGAGGCGGCAGCAGGTGTGTGCAATTGGAGAGAAAGAGATAGTGAGGGAGAGAGA GATAATGAGAGAGAGAGAAGGAGAGAGATAGTAAAATAAAAGAAATAACCCCGNTTCACA AATCCGTGTCCTTAACACTGTACGGNCGCCTAGTACTGGAAGCGTAGTAAAGCGTTACTA ACGCGCAATTGGCGCGCAAACTGCGCGCAAATCACGCGTCAATCACGCGGTGGTGTTAAA AAGAGCCTTCCCTCTTCACCTTCCATTGCTATCACATCCCCGAACGTTGTCAATTATTTC TGACGAGCTTTTCTGGTTTCCTGTGCAACCTGGACAATGCTTTGGACACTCTTTCGTTGC TCGAGAAGCACGGCTGACAACACGCGCTTATGATCCGCTCTGCGCAAAGCGTTTGCGTAC ACAGAAGGAGAAGGAGAAGGCCCACGTGGTGCGTGCGCGCGCACGCTGTAATGCACCGTT CCTTGCAATACACAGACAGAGAACGTTTTCGGAGGCATTTGAATGTGAAGGAAGTAGGCC GTAGAAACGGCAACGGAAGCTGTGGGAACGTGTTATTCTTTTCGTTTCTTTTTTAAGGTG ATACAATAAAGCAGGAAAATACAGATTGC



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)