cluster # 5540

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Anopheles gambiae
cluster # 5540 cluster # 5540 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5540#0 length = 1933 sequences # 4
consensusID : consensus_5540#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1933
fasta sequence
                              [CCGGTCTCGATGGGGTTCACCGCCGGACTCGCTGTCGTCAGCTCGGTGTCGAATGTTGTTTTTCGATCGTTCATCGCCGCCCTTGGTAAGGTGGTTTGTCTTACCGCCGTTCGCGTCACTACCATCTCCGCCATACCGGCTAGCAGTAGTTCCCCCGCTGCTACTGCCACCACCACCACCGTTCTCGCCATCATTATCGGAATCGTGAAATGCACCGGTCGCATCGAAGCTGCCACCGAAATCGGACGGATTTTCCGTGGCCCACTCGGGCAGCTCATCGGTGTCCCAGTTCGGGCGACGCATTCCACCGGCACCCATCGAGTGGCCGGAATTCGGATCACCACCGCCGCTGCCAAGACCGCCACCAGACGAAAGGCGCGACTTGTAGGGGGGAATCATCCGGTCACCCCCGATGCTACTATTCAATCCTCGTTCGACCCCGTGATGCGAGGAGCTATCCTCATCGCGCCAGCTCGTTGATCGAGTCCACTTTTCACGCGCCACGCCCGTAATACTGCCGCCAGTACCACCACCAGACCGCCAATCGCTGAT-CCCGTTGCTGGTAGCGCCGGCGTTCTCATCGTCCGTACGGGAACGACGCCAACTTTCCAAGCCCCCGCTCGTACGAATAACGCGCGACCCGTACTCCTTCCGAGGGCTCGACGATGAGTTGTTCCACTCTGCATCGCCTCCGACCCCTCCGATGCCACCAGTTCCGTTACGCTCCAGCCACGGTCGTTCGCCTCTTCCTACGCCCCTGGATTCATCATCGTAGAAAGAGGACGAACGTTGATAGCTAGTATACAGACCGCGGCCACGCCCGCGACCACGATCTACCGAGCCACCACGAGCGCCACGTCCAGGAATTCCAAGCGAAATACTTCTCGATGGCCAAGCGCGCCGTGCCTCCGGTTCCACAATCAGTTCTTCCTCCGGACAAGGAGTAAGCGCGAGCGGTGGTTGCGGCTTTTCCACGAACAAGCCCTTATAGTGCACCAGTATTTCCGGAGTCTTGGTCGTTCTCCCGTCGAACAGAGCTAGCATTTCGGCCCGGCCGTAGCGAAACTCGGCCAACGGGTACCGGATTGCAGTGGAGGTAACAGCGCCCCCCGGTCCAGTCCCGCCGTTGTTAGCAGCAGCGCCACCGCCTCCACCAGAGCTCCCACCATACGAGCTATTGGAAAGGCCACCACCACCTCCGCCAGCAGCAGCGGAGCTGCCACCGCCGCCGACGCTGCCACCGCCACCGATAGCGCTGCCGCTGATACTATGCGACAGGCTATGGTGCGATGAAGAGTGCGACGACGACGGCGACTGCGAATGGTGATGCGGAAGATGTTGATGATGCAATCCGACGCCTCCACCACCGCCAGCATTGTTGGCGACGGTGCTGCTGCTATTGCTGTTCACCATCGAATGGCTGCTGTGGTGGCTGCTGCTGCTGCTGCCGGTGTTCGTACTGTGATGGTTACTAGTGGTGTTACTATCGGACGCCACCTTGCGTAACCAGGCAGGCCCAAAGTTGATTGCGTCACCCATCCTTGCACGGACACCGTTAGGAAGGCTGCTTGCTTTGTTGGCCGCGGTTAACGGTTCTGCACTTTCTGGATGTTTATCAACAAATGGCTCGCCAGGCAGATTAAGCTGCTACAATCACTCTTCAGTGGGGTGTAGTGGCAGAAGGTGGGTGGCAGTAACGATACAATTTCCGGGATCGATGATACCGTTGCTTCGACAGCTTCTCCTCCTTCTGGATGAAGAAGCGGACGACTTTGTCCAGCTTTAATCTGCCCCGATCTTCTCCTGTTCCACTGTTGAAGGTGTCTGGGAAAAAGTCGGAGCACTCGGATTCGCCGAGACGGGAATTTGCCGTAGCTTTTCCGCAAAACTGTTACCACCACGGAAAAGGATTTCCGCCACTCTATAATTTTAC]

[+] EMBL BM581046             [CCGGTCTCGATGGGGTTCACCGCCGGACTCGCTGTCGTCAGCTCGGTGTCGAATGTTGTTTTTCGATCGTTCATCGCCGCCCTTGGTAAGGTGGTTTGTCTTACCGCCGTTCGCGTCACTACCATCTCCGCCATACCGGCTAGCAGTAGTTCCCCCGCTGCTACTGCCACCACCACCACCGTTCTCGCCATCATTATCGGAATCGTGAAATGCACCGGTCGCATCGAAGCTGCCACCGAAATCGGACGGATTTTCCGTGGCCCACTCGGGCAGCTCATCGGTGTCCCAGTTCGGGCGACGCATTCCACCGGCACCCATCGAGTGGCCGGAATTCGGATCACCACCGCCGCTGCCAAGACCGCCACCAGACGAAAGGCGCGACTTGTAGGGGGGAATCATCCGGTCACCCCCGATGCTACTATTCAATCCTCGTTCGACCCCGTGATGCGAGGAGCTATCCTCATCGCGCCAGCTCGTTGATCGAGTCCACTTTTCACGCGCCACGCCCGTAATACTGCCGCCAGTACCACCACCAGACCGCCAATCGCTGAT CCCGTTGCTGGTAGCGCCGGCGTTCTCATCGTCCGTACGGGAACGACGCCAACTTTCCAAGCCCCCGCTCGTACGAATAACGCGCGACCCGTACTCCTTCCGAGGGCTCGACGATGAGTTGTTCCACTCTGCATCGCCTCCGACCCCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL BM595671             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCGTTGATCGAGTCCACTTTTCACGCGCCACGCCCGTAATACTGCCGCCAGTACCACCACCAGATCGCCAATCGCTGATCCCCGTTGCTGGTAGCGCCGGCGTTCTCATCGTCCGTACGGGAACGACGCCAACTTTCCAAGCCCCCGCTCGTACGAATAACGCGCGACCCGTACTCCTTCCGAGGGCTCGACGATGAGTTGTTCCACTCTGCATCGCCTCCGACCCCTCCGATGCCACCAGTTCCGTTACGCTCCAGCCACGGTCGTTCGCCTCTTCCTACGCCCCTGGATTCATCATCGTAGAAAGAGGACGAACGTTGATAGCTAGTATACAGACCGCGGCCACGCCCGCGACCACGATCTACCGAGCCACCACGAGCGCCACGTCCAGGAATTCCAAGCGAAATACTTCTCGATGGCCAAGCGCGCCGTGCCTCCGGTTCCACAATCAGTTCTTCCTCCGGACAAGGAGTAAGCGCGAGCGGTGGTTGCGGCTTTTCCACGAACAAGCCCTTATAGTGCACCAGTATTTCCGGAGTCTTGGTCGTTCTCCCGTCGAACAGAGCTAGCATTTCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL BM653102             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAATACTTCTGGATGGCCAAGCGCGCCGTGCCTCCGGTTCCACAATCAGTTCTTCCTCCGGACAAGGAGTAAGCGCGAGCGGTGGTTGCGGCTTTTCCACGAACAAGCCCTTATAGTGCACCAGTATTTCCGGAGTCTTGGTCGTTCTCCCGTCGAACAGGGCTAGCATTTCCTCCCGGCCGTAGCGAAACTCGGCCAACGGGTACCGGATTGCAGTGGAGGTAACAGCGCCCCCCGGTCCAGTCCCGCCGTTGTTAGCAGCAGCGCCACCGCCTCCACCAGAGCTCCCACCATACGAGCTATTGGAAAGGCCACCACCACCTCCGCCAGCAGCAGCGGAGCTGCCACCGCCGCCGACGCTGCCACCGCCACCGATAGCGCTGCCGCTGATACTATGCGACAGGCTATGGTGCGATGAAGAGTGCGACGACGACGGCGACTGCGAATGGTGATGCGGAAGATGTTGATGATGCAATCCGACGCCTCCACCACCGCCAGCATTGTTGGCGACGGTGCTGCTGCTATTGCTGTTCACCATCGAATGGCTGCTGTGGTGGCTGCTGCTGCTGCTGCCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL BM622650             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGCGAATGGTGATGCGGAAGATGCTGATGATGCAATCGGACGCCTCCACCACCGCCAGCATTGTTGGCGACGGTGCTGCTGCTATTGCTGTTCACCATCGAATGGCTGCTGTGGTGGCTGCTGCTGCTGCTGCTACTGTTCGTACTGTGATGGTTACTAGTGGTGTTACTATCGGACGCCACCTTGCGTAACCAGGCAGGCCCAAAGTTGATTGCGTCACCCATCCTTGCACGGACACCGTTAGGAAGGCTGCTTGCTTTGTTGGCCGCGGTTAACGGTTCTGCACTTTCTGGATGTTTATCAACAAATGGCTCGCCAGGCAGATTAAGCTGCTACAATCACTCTTCAGTGGGGTGTAGTGGCAGAAGGTGGGTGGCAGTAACGATACAATTTCCGGGATCGATGATACCGTTGCTTCGACAGCTTCTCCTCCTTCTGGATGAAGAAGCGGACGACTTTGTCCAGCTTTAATCTGCCCCGATCTTCTCCTGTTCCACTGTTGAAGGTGTCTGGGAAAAAGTCGGAGCACTCGGATTCGCCGAGACGGGAATTTGCCGTAGCTTTTCCGCAAAACTGTTACCACCACGGAAAAGGATTTCCGCCACTCTATAATTTTAC]




>consensus_5540#0
CCGGTCTCGATGGGGTTCACCGCCGGACTCGCTGTCGTCAGCTCGGTGTCGAATGTTGTT
TTTCGATCGTTCATCGCCGCCCTTGGTAAGGTGGTTTGTCTTACCGCCGTTCGCGTCACT
ACCATCTCCGCCATACCGGCTAGCAGTAGTTCCCCCGCTGCTACTGCCACCACCACCACC
GTTCTCGCCATCATTATCGGAATCGTGAAATGCACCGGTCGCATCGAAGCTGCCACCGAA
ATCGGACGGATTTTCCGTGGCCCACTCGGGCAGCTCATCGGTGTCCCAGTTCGGGCGACG
CATTCCACCGGCACCCATCGAGTGGCCGGAATTCGGATCACCACCGCCGCTGCCAAGACC
GCCACCAGACGAAAGGCGCGACTTGTAGGGGGGAATCATCCGGTCACCCCCGATGCTACT
ATTCAATCCTCGTTCGACCCCGTGATGCGAGGAGCTATCCTCATCGCGCCAGCTCGTTGA
TCGAGTCCACTTTTCACGCGCCACGCCCGTAATACTGCCGCCAGTACCACCACCAGACCG
CCAATCGCTGATCCCGTTGCTGGTAGCGCCGGCGTTCTCATCGTCCGTACGGGAACGACG
CCAACTTTCCAAGCCCCCGCTCGTACGAATAACGCGCGACCCGTACTCCTTCCGAGGGCT
CGACGATGAGTTGTTCCACTCTGCATCGCCTCCGACCCCTCCGATGCCACCAGTTCCGTT
ACGCTCCAGCCACGGTCGTTCGCCTCTTCCTACGCCCCTGGATTCATCATCGTAGAAAGA
GGACGAACGTTGATAGCTAGTATACAGACCGCGGCCACGCCCGCGACCACGATCTACCGA
GCCACCACGAGCGCCACGTCCAGGAATTCCAAGCGAAATACTTCTCGATGGCCAAGCGCG
CCGTGCCTCCGGTTCCACAATCAGTTCTTCCTCCGGACAAGGAGTAAGCGCGAGCGGTGG
TTGCGGCTTTTCCACGAACAAGCCCTTATAGTGCACCAGTATTTCCGGAGTCTTGGTCGT
TCTCCCGTCGAACAGAGCTAGCATTTCGGCCCGGCCGTAGCGAAACTCGGCCAACGGGTA
CCGGATTGCAGTGGAGGTAACAGCGCCCCCCGGTCCAGTCCCGCCGTTGTTAGCAGCAGC
GCCACCGCCTCCACCAGAGCTCCCACCATACGAGCTATTGGAAAGGCCACCACCACCTCC
GCCAGCAGCAGCGGAGCTGCCACCGCCGCCGACGCTGCCACCGCCACCGATAGCGCTGCC
GCTGATACTATGCGACAGGCTATGGTGCGATGAAGAGTGCGACGACGACGGCGACTGCGA
ATGGTGATGCGGAAGATGTTGATGATGCAATCCGACGCCTCCACCACCGCCAGCATTGTT
GGCGACGGTGCTGCTGCTATTGCTGTTCACCATCGAATGGCTGCTGTGGTGGCTGCTGCT
GCTGCTGCCGGTGTTCGTACTGTGATGGTTACTAGTGGTGTTACTATCGGACGCCACCTT
GCGTAACCAGGCAGGCCCAAAGTTGATTGCGTCACCCATCCTTGCACGGACACCGTTAGG
AAGGCTGCTTGCTTTGTTGGCCGCGGTTAACGGTTCTGCACTTTCTGGATGTTTATCAAC
AAATGGCTCGCCAGGCAGATTAAGCTGCTACAATCACTCTTCAGTGGGGTGTAGTGGCAG
AAGGTGGGTGGCAGTAACGATACAATTTCCGGGATCGATGATACCGTTGCTTCGACAGCT
TCTCCTCCTTCTGGATGAAGAAGCGGACGACTTTGTCCAGCTTTAATCTGCCCCGATCTT
CTCCTGTTCCACTGTTGAAGGTGTCTGGGAAAAAGTCGGAGCACTCGGATTCGCCGAGAC
GGGAATTTGCCGTAGCTTTTCCGCAAAACTGTTACCACCACGGAAAAGGATTTCCGCCAC
TCTATAATTTTAC
clustalw multiple alignements is not computed in this case