These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_556#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 522 fasta sequence [CCGAGGAGATACCGCTGGAAGACTTTCGTCGCTCCCAAAACTCTAGTCCCGTGTCGCGCAACTCATCCAACAATCCATCCCGTTCGCACACTCCTTCCCGGTTAACGTTAGAGCCGCTGAGTGTGGTTAACATCTCGTCGAACATGGGCGGCAGTGGAAGTGGGACGACCGGTGGCAACGGGAGCGTGCTGAGCGGTTCCGTGAAAGATCCGATCATTCCGAATGTGCTGTTAGCTGGTACGATTAACCCGGTACCGAACGTAACGCCACTTCCGGTCGGCGGCCCGCTCGCCGTACCGTCGGAGTTGAGCCCAACATCGGAGGAAACATCGTTCATTGCGAACGAGGAGCGGCAGAAAAAGCGAGGAGTCATCGAAACGGTGTAAACACTGAATCGCGATAGCAGGGTACACATATTTACGATCGATGGCTCCGGACAAAGAAGATTCGTGAGGGGTGTGGTACTCTTCCTTTGTATTTATTTCTGTTGTAACGGTTAGGTTTTATTGTTGAGATTTTAAA] [+] EMBL BM621717 [CCGAGGAGATACCGCTGGAAGACTTTCGTCGCTCCCAAAACTCTAGTCCCGTGTCGCGCAACTCATCCAACAATCCATCCCGTTCGCACACTCCTTCCCGGTTAACGTTAGAGCCGCTGAGTGTGGTTAACATCTCGTCGAACATGGGCGGCAGTGGAAGTGGGACGACCGGTGGCAACGGGAGCGTGCTGAGCGGTTCCGTGAAAGATCCGATCATTCCGAATGTGCTGTTAGCTGGTACGATTAACCCGGTACCGAACGTAACGCCACTTCCGGTCGGCGGCCCGCTCGCCGTACCGTCGGAGTTGAGCCCAACATCGGAGGAAACATCGTTCATTGCGAACGAGGAGCGGCAGAAAAAGCGAGGAGTCATCGAAACGGTGTAAACACTGAATCGCGATAGCAGGGTACACATATTTACGATCGATGGCTCCGGACAAAGAAGATTCGTGAGGGGTGTGGTACTCTTCCTTTGTATTTATTTCTGTTGTAACGGTTAGGTTTTATTGTTGAGATTTTAAA] consensusID : consensus_556#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 459 fasta sequence [GAACTCGGGTAAGGGGGACGTCAGGAAGGCTAACATCGTCCGTCATTTTCCACCAGCAACCGGGTGCCGGGTGTGGCTGCGGCCTTGAAGGCGCGATAGTATGCCATCGGGCAGCGTCAGTCGTGTGCAGATGAGTGCGAGTCGCTCAACCGAAGGCGAACCAACGGGCACGCGAAGAAAGCTGACTGCGTGGAGCCACTCGGCGGGAAAGCAGCCAACCGATCGGCATTGGATCGAGCTCGCTGAAATCGCGGGAAAATTCGCGTAACCGGTCCGGTACGCCCCGGTCCAGGGAATCGAGCCCGCGCATACCACGGCCCCGGTTCGGAGGAGATACCGCGTGGAAGACTTTGCGTCGCTCCCAAAACTCTAGTCCCGTGTCGNCGCANCTCAGTCNCAANAAGTCNCATNCCGGTTACGGCGACGACTNCNCTTTCCACGGGGTTAAACGGTNGAGAA] [+] EMBL BX469031 [GAACTCGGGTAAGGGGGACGTCAGGAAGGCTAACATCGTCCGTCATTTTCCACCAGCAACCGGGTGCCGGGTGTGGCTGCGGCCTTGAAGGCGCGATAGTATGCCATCGGGCAGCGTCAGTCGTGTGCAGATGAGTGCGAGTCGCTCAACCGAAGGCGAACCAACGGGCACGCGAAGAAAGCTGACTGCGTGGAGCCACTCGGCGGGAAAGCAGCCAACCGATCGGCATTGGATCGAGCTCGCTGAAATCGCGGGAAAATTCGCGTAACCGGTCCGGTACGCCCCGGTCCAGGGAATCGAGCCCGCGCATACCACGGCCCCGGTTCGGAGGAGATACCGCGTGGAAGACTTTGCGTCGCTCCCAAAACTCTAGTCCCGTGTCGNCGCANCTCAGTCNCAANAAGTCNCATNCCGGTTACGGCGACGACTNCNCTTTCCACGGGGTTAAACGGTNGAGAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_556#0 CCGAGGAGATACCGCTGGAAGACTTTCGTCGCTCCCAAAACTCTAGTCCCGTGTCGCGCA 60 consensus_556#1 --------------------------------------------GAACTCGGGTAAGGGG 16 * ** ** * consensus_556#0 ACTCATCCAACAATCCATCCCGTTCGCACACTCCTTCCCGGTTAACGTTAGAGCCGCTGA 120 consensus_556#1 GACGTCAGGAAGGCTAACATCGTCCGT-CATTTTCCACCAGCAACCG-----GGTGCCGG 70 * * *** ** ** * ** * * ** * ** * consensus_556#0 GTGTGGTTAACATCTCGTCGAACATGGGCGGCAGTGGAAGTGGGACGACCGGTGGCAACG 180 consensus_556#1 GTGTGGCTGCGGCCTTGAAGG-CGCGATAGTATGCCATCGGGCAGCGTCAGTCGTGTGCA 129 ****** * ** * * * * * * * * ** * * * * consensus_556#0 GGAGCGTGCTGAGCGGTTCCGTGAAAGATCCGATCATTCCGAATGTGCTGTTAGCTGGTA 240 consensus_556#1 GATGAGTGC-GAGTCGCTCAACCGAAGG-CGAACCAACGGGCACGCGAAGAAAGCTGACT 187 * * **** *** * ** *** * * ** * * * * * ***** consensus_556#0 CGATTAACCCGGTACCGAACGTAACGCCACTT-CCGGTCGGCGGCCCGCTCGCCGTACCG 299 consensus_556#1 GCGTGGAGCCACT--CGGCGGGAAAGCAGCCAACCGATCGGCA-TTGGATCG--AGCTCG 242 * * ** * ** * ** ** * *** ***** * *** ** consensus_556#0 TCGGAGTTGAGCCCAACATCGGAGGAAACATC--GTTCATTGCGAACGAGGAGCGGCAGA 357 consensus_556#1 CTGAAATCGCGGGAAAATTCGCGTAACCGGTCCGGTACGCCCCGGTCCAGGGA--ATCGA 300 * * * * * ** *** * ** ** * ** * *** ** consensus_556#0 AAAAGCGAGGAGTCATCGAAACGGTGTAAACACTGAATCGCGATAGCAGGGTACACATAT 417 consensus_556#1 GCCCGCGCATA-CCACGGCCCCGGTTCGGAGGAGATACCGCG-TGGAAGACTTTGCGTCG 358 *** * ** * **** * * **** * * ** * * * consensus_556#0 TTAC--GATCGATGGCTCCGGACAAAGAAGATTCGTGAGGGGTGTGGTACTCTTCCTTTG 475 consensus_556#1 CTCCCAAAACTCTAGTCCCGTGTCGNCGCANCTCAGTCNCAANAAGTCNCATNCCGGTTA 418 * * * * * * *** ** * * * ** consensus_556#0 TATTTATTTCTGTTGTAACGGTTAGGTTTTATTGTTGAGATTTTAAA 522 consensus_556#1 CGGCGACGACTNCNCTTTCCACGGGGTTAAACGGTNGAGAA------ 459 * ** * * **** * ** **** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||