Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 5602 cluster # 5602       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5602#0 length = 1282 sequences # 4  
consensusID : consensus_5602#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1282
fasta sequence 
                              [GAAAGCTCGCGCCGTGGAATCGGGAAAGAAAAAACCGCGATCG-GTGCAGCAAAAGCGGTCGAACGTACGTAAAACTGCATTCGAAGCCGTTCCCAGCACTGCAGATGCAAACAGTTATTACGAATTTAAAAAAAAACACAGTGAAGCTTTTACGAACTGCTTGTGAATTGAAGTGAAATAAGCGCAAGCCAGTGAAGCACTCGTGTGGCGAAGTGCTCGTGCACTCTATTTTATTCCCCAAAAAACTAGCATTTTTCCACAGCCGCCCAGCAAAATGACCATCGTGAAAAGCAATACAGCAGACGCGGCTGGCACCAATCCGGCGGACAATGCCAAATCGCCGCTCTCTTCGTCGTCATCGTCCTCTTCCTCCTCCGACTCGGACGATTGCTCGGACTCGTCGAGCGATTCCGACTCGTCGTCGGCGTCCACGAGCAAAACCAGCAGCAAACAGAGCAGCGGCGGAGGAGGAGGAGGAGGAGTGCCACAAGAAAAACCACAACAATTTAGTGTTATGAGTTCCGATAGTGCCGGACTTCGAATGAAAATAGCCATTCCTCGAAGCCAATCGAACGCGACACCAACGCCTTCACCGACGGCGTCGCTCGGTTCCAACCATCAGCACCAGCAGCTGATGCAACAGGACAGCCTTCCTGTCGGTGGCGGAGTAGCAGCTGATCGAAGGCAGAAAAATGCGGAAAACGTTCACGGCGGCGAACGCGCATCGCCCGCCGGATCCTCCACGAAAGTGGATTCGTTCAAGGACGGCGCCACGAAGAAAGGATCCATTGCAGCAAAGAGTGCCATGGTGGCGGCGGTGGAGGCGAGTTCAACTCGCGCTAGAGCACCTCCACCTTCAACCGCCCAGCAGCGTGTGTCGAGCGAAGGCGGTGGTAGCAAAGCGTTAACGGCAACGGCTGCCTCGCGCAAGCAGGGCAGTAGAATGCTGCCCGACGACAAACGGGAAGAGCGGGGCAGAACGATGCACACCAAGGCTAGGAAGCGTCGGTCGTCGTCGGGCAACGATGGCAGCAGTGCGGGTCGCACGAAGAAAAGTGTCAGTGAAAGTGATTCCAGTTCGGCCAGCTCGTCCTTCTCGTCCTGCACGAGCAACAGCGATAGCGACACGAGCAGTACCGCCGGCGACAACAGCAATCATCATCATCAGCAGCAGCAGGACGATAAGGCGAAGCAAACGGTGGGTGGGGGACGCCATGCAAGGACAGCGGCGTCAGCGGCGGTCGCGTCTGGGAGGTTATCGCAGCTGGCAAAAAAAAAAAAA]

[+] EMBL CNS09KYJ             [GAAAGCTCGCGCCGTGGAATCGGGAAAGAAAAAACCGCGATCG GTGCAGCAAAAGCGGTCGAACGTACGTAAAACTGCATTCGAAGCCGTTCCCAGCACTGCAGATGCAAACAGTTATTACGAATTTAAAAAAAAACACAGTGAAGCTTTTACGAACTGCTTGTGAATTGAAGTGAAATAAGCGCAAGCCAGTGAAGCACTCGTGTGGCGAAGTGCTCGTGCACTCTATTTTATTCCCCAAAAAACTAGCATTTTTCCACAGCCGCCCAGCAAAATGACCATCGTGAAAAGCAATACAGCAGACGCGGCTGGCACCAATCCGGCGGACAATGCCAAATCGCCGCTCTCTTCGTCGTCATCGTCCTCTTCCTCCTCCGACTCGGACGATTGCTCGGACTCGTCGAGCGATTCCGACTCGTCGTCGGCGTCCACGAGCAAAACCAGCAGCAAACAGAGCAGCGGCGGAGGAGGAGGAGGAGGAGTGCCACAAGAAAAACCACAACAATTTAGTGTTATGAGTTCCGATAGTGCCGGACTTCGAATG AAATAGCCATTCCTCGAAGCCAATCGAACGCGACACCAACGCCTTCACCGACGGCGTCGCTCGGTTCCAACCATCAGCACCAGCAGCTGATGCAACAGGACAGCCTTCCTGTCGGTGGCGGAGTAGCAGCTGATCGAAGGCAGAAAAATGCGGAAAACGTTCACGGCGGCGAACGCGCATCGCCCGCCGGATCCTCCACGAAAGTGGATTCGTTCAAGGACGGCGCCACGAAGAAAGGATCCATTGCAGCAAAGAGTGCCATGGTGGCGGCGGTGGAGGCGAGTTCAACTCGCGCTAGAGCACCTCCACCTTCAACCGCCCAGCAGCGTGTGTCGAGCGAAGGCGGT                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS097V1             [                   TCGGGAAAGAAAAAACCGCGATCGCGTGCAGCAAAAGCGGTCGAACGTACGTAAAACTGCATTCGAAGCCGTTCCCAGCACTGCAGATGCAAACAGTTATTACGAATTTAAAAAAAAACACAGTGAAGCTTTTACGAACTGCTTGTGAATTGAAGTGAAATAAGCGCAA CCAGTGAAGCACTCGTGTGGCGAAGTGCTCGTGCACTCTATTTTATTCCCCAAAAAACTAGCATTTTTCCACAGCCGCCCAGCAAAATGACCATCGTGAAAAGCAATACAGCAGACGCGGCTGGCACCAATCCGGCGGACAATGCCAAATCGCCGCTCTCTTCGTCGTCATCGTCCTCTTCCTCCTCCGACTCGGACGATGGCTCGGACTCGTCGAGCGATTCCGACTCGTCGTCGGCGTCCACGAGCAAAACCAGCAGCAAACAGAGCAGCGGCGGAGGAGGAGGAGGAGGAGTGCCACAAGAAAAACCACAACAATTTAGTGTTATGAGTTCCGATAGTGCCGGACTTCGAATGAAAATAGCCATTCCTCGAAGCCAATCGAACGCGACACCAACGCCTTCACCGACGGCGTCGCTCGGTTCCAACCATCAGCACCAGCAGCTGATGCAACAGGACAGCCTTCCTGCCGGTGGCGGAGTAGCAGCTGATCGAAGGCAGAAAAATGCGGAAAACGTTCACGGCGGCGAACGCGCATCGCCCGCCGGATCCTCCACGAAAGT GATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS09KYK             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGAGGAGTGCCACAAGAAAAACCACAACAATTTAGTGTTATGAGTTCCGATAGTGCCGGACTTCGAATGAAAATAGCCATTCCTCGAAGCCAATCGAACGCGACACCAACGCCTTCACCGACGGCGTCGCTCGGTTCCAACCATCAGCACCAGCAGCTGATGCAACAGGACAGCCTTCCTGTCGGTGGCGGAGTAGCAGCTGATCGAAGGCAGAAAAATGCGGAAAACGTTCACGGCGGCGAACGCGCATCGCCCGCCGGATCCTCCACGAAAGTGGATTCGTTCAAGGACGGCGCCACGAAGAAAGGATCCATTGCAGCAAAGAGTGCCATGGTGGCGGCGGTGGAGGCGAGTTCCACTCGCGCTAGAGCCCCTCCCCCTTCAACCGCCCAGCAGCGTGTGTCGAGCGAAGGCGGTGGTAGCAAAGCGTTAACGGCAACGGCTGCCTCGCGCAAGCAGGGCAGTAGAATGCTGCCCGACGACAAACGGGAAGAGCGGGGCAGAACGATGCACACCAAGGCTAGGAAGCGTCGGTCGTCGTCGGGCAACGATGGCAGCAGTGCGGGTCGCACGAAGAAAAGTGTCAGTGAAAGTGATTCCAGTTCGGCCAGCTCGTCCTTCTCGTCCTGCACGAGCAACAGCGATAGCGACACGAGCAGTACCGCCGGCGACAACAGCAATCATCATCATCAGCAGCAGCAGGACGATAAGGCGAAGCAAACGGTGGGTGGGGGACGCCATGCAAGGACAGCGGCGTCAGCGGCGGTCGCGTCTGGGAGGTTATCGCAGCTGGCAAAAAAAAAAAAA]
[-] EMBL CNS097V2             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCTGCCCCACGACAAACGGGAAGAGCGGGGCAGAACGATGCACACCAAGGCTAGGAAGCGTCGGTCGTCGTCGGGCAACGATGGCAGCAGTGCGGGTCGCACGAGGAAAAGTGTCAGTGAAAGTGATTCCAGTTCGGCCAGCTCGTCCTTTTCGTCCTGCACGAGCAACAGCGATAGCGACACGAGCAGTACCGCCGGCGACAACAGCAATCATCTTCt                                                                                                                      ]




>consensus_5602#0
GAAAGCTCGCGCCGTGGAATCGGGAAAGAAAAAACCGCGATCGGTGCAGCAAAAGCGGTC
GAACGTACGTAAAACTGCATTCGAAGCCGTTCCCAGCACTGCAGATGCAAACAGTTATTA
CGAATTTAAAAAAAAACACAGTGAAGCTTTTACGAACTGCTTGTGAATTGAAGTGAAATA
AGCGCAAGCCAGTGAAGCACTCGTGTGGCGAAGTGCTCGTGCACTCTATTTTATTCCCCA
AAAAACTAGCATTTTTCCACAGCCGCCCAGCAAAATGACCATCGTGAAAAGCAATACAGC
AGACGCGGCTGGCACCAATCCGGCGGACAATGCCAAATCGCCGCTCTCTTCGTCGTCATC
GTCCTCTTCCTCCTCCGACTCGGACGATTGCTCGGACTCGTCGAGCGATTCCGACTCGTC
GTCGGCGTCCACGAGCAAAACCAGCAGCAAACAGAGCAGCGGCGGAGGAGGAGGAGGAGG
AGTGCCACAAGAAAAACCACAACAATTTAGTGTTATGAGTTCCGATAGTGCCGGACTTCG
AATGAAAATAGCCATTCCTCGAAGCCAATCGAACGCGACACCAACGCCTTCACCGACGGC
GTCGCTCGGTTCCAACCATCAGCACCAGCAGCTGATGCAACAGGACAGCCTTCCTGTCGG
TGGCGGAGTAGCAGCTGATCGAAGGCAGAAAAATGCGGAAAACGTTCACGGCGGCGAACG
CGCATCGCCCGCCGGATCCTCCACGAAAGTGGATTCGTTCAAGGACGGCGCCACGAAGAA
AGGATCCATTGCAGCAAAGAGTGCCATGGTGGCGGCGGTGGAGGCGAGTTCAACTCGCGC
TAGAGCACCTCCACCTTCAACCGCCCAGCAGCGTGTGTCGAGCGAAGGCGGTGGTAGCAA
AGCGTTAACGGCAACGGCTGCCTCGCGCAAGCAGGGCAGTAGAATGCTGCCCGACGACAA
ACGGGAAGAGCGGGGCAGAACGATGCACACCAAGGCTAGGAAGCGTCGGTCGTCGTCGGG
CAACGATGGCAGCAGTGCGGGTCGCACGAAGAAAAGTGTCAGTGAAAGTGATTCCAGTTC
GGCCAGCTCGTCCTTCTCGTCCTGCACGAGCAACAGCGATAGCGACACGAGCAGTACCGC
CGGCGACAACAGCAATCATCATCATCAGCAGCAGCAGGACGATAAGGCGAAGCAAACGGT
GGGTGGGGGACGCCATGCAAGGACAGCGGCGTCAGCGGCGGTCGCGTCTGGGAGGTTATC
GCAGCTGGCAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)