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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5663#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1098 fasta sequence
[CCGCGGACGCGTGGGCGCGATCACCACCAACACCACGACAGCAGCAGCAACGGCACGACACAGACAGCGGCAGCCGTAACGCCATCGGCTAAGCAGTCGGCTCCAGGGTCAGACGGTGGCAACGGCGGCAGTGGCCACCAACACAAGCACAACGGCAATACAGCACTGGAGGCAGCAGCAGTACCGAGCGCCGCGTCATCGCCGACGACGGGAATTTGCGATTCGCCTTCGATCCAGCAGCTCACGACCAAGCTCGGCAGTCTACATCTGGCGACCTCTACGCCGACTGGCGCTGCGAATGGATCCGCCGTCTCGGTACAGGATCGCCGTAACCTCGAGTACGTAACGAGCGACGAGGAGGAGGAGGAGGACGACGACGACGAAGACGTCGAAGAAGGAGAGTGCGCCAACGTGGACGGTGAGAACGAGCGTGGACGGCGCAACAACAGCTCCCGATCCTACCAGGTCAATCCCGAATCGAGCGAGAGCGAGGACGCACGCGACGGTGCGGCCAGTGGTGGCAGCGAGAACGACGCGGACGACGACGAGGAAGCTGAACTCGACGACGACGACGAGCGTTCGGTGCGGAAGATTTCACGCACCGCGATGGAGAACATTGCCCGCGCCGGCACTACGACGCAGTTCCGATTCAATGGCGCTGTCAAATCGTACCTGCCCGGCGGTGCGATGGGGAAGCCCGCCGCTCCCGCTCCGAGCACCAAGGCACCCGCGCCCCCGATCCCGATGTCCCGCGAGAGTCTCGCCGGCAAGGCTAACGGTGCTTCCACGGCAGCAGCAGCGGTCCAGGCGATCG-AGGTCAGCGGGCGCCTGCCGCCAGAGGGCGCCGCAAACAACAGTGTAAATGGTGTCGGTGGTGGTGGCAGTGCAAAACAACATAGCAGTGGTTCTACCGGTGCGCTATTGCAGCAGGGCGGCGGTGGCTCCGTTGGCTCGTCCACGGCACCATCGCCACCTTCCCTGACGCGGCGCGAGATCGAGAAGAATCAAATCAATCGCGAAAAGAGTGGTGAACCCGCGGTGCCAGCAGCAGCGGCATCATCCGGCACCAACAGCATTAACGGTAGTGTGGCCAGTGGT]
[+] EMBL BM597404 [CCGCGGACGCGTGGGCGCGATCACCACCAACACCACGACAGCAGCAGCAACGGCACGACACAGACAGCGGCAGCCGTAACGCCATCGGCTAAGCAGTCGGCTCCAGGGTCAGACGGTGGCAACGGCGGCAGTGGCCACCAACACAAGCACAACGGCAATACAGCACTGGAGGCAGCAGCAGTACCGAGCGCCGCGTCATCGCCGACGACGGGAATTTGCGATTCGCCTTCGATCCAGCAGCTCACGACCAAGCTCGGCAGTCTACATCTGGCGACCTCTACGCCGACTGGCGCTGCGAATGGATCCGCCGTCTCGGTACAGGATCGCCGTAACCTCGAGTACGTAACGAGCGACGAGGAGGAGGAGGAGGACGACGACGACGAAGACGTCGAAGAAGGAGAGTGCGACAACGTGGACGGTGAGAACGAGCGTGGACGGCGCAACAACAGCTCCCGATCCTACCAGGTCAATCCCGAATCGAGCGAGAGCGAGGACGCACGCGACGGTGCGGCCAGTGGTGGCAGCGAGAACGACGCGGA ]
[+] EMBL BM614224 [ cCGCCCACGCGTCCGGTGAGAACGAGCGTGGACGGCGCAACAACAGCTCCCGATCCTACCAGGTCAATCCCGAATCGAGCGAGAGCGAGGACGCACGCGACGGTGCGGCCAGTGGTGGCAGCGAGAACGACGCGGACGACGACGAGGAAGCTGAACTCGACGACGACGACGAGCGTTCGGTGCGGAAGATTTCACGCACCGCGATGGAGAACATTGCCCGCGCCGGCACTACGACGCAGTTCCGATTCAATGGCGCTGTCAAATCGTACCTGCCCGGCGGTGCGATGGGGAAGCCCGCCGCTCCCGCTCCGAGCACCAAGGCACCCGCGCCCCCGATCCCGATGTCCCGCGAGAGTCTCGCCGGCAAGGCTAACGGTGCTTCCACGGCAGCAGCAGCGGTCCAGGCGATCGAAGGTCAGCGGGCGCCTGCCGCCAGAGGGCGCCGCAAACAACAGTGTAAATGGTGTCGGTGGTGGTGGCAGTGC ]
[+] EMBL BM591093 [ ccgAACGTGGACGGTGAGAACGAGCGTGGACGGCGCAACAACAGCTCCCGATCCTACCAGGTCAATCCCGAATCGAGCGAGAGCGAGGACGCACGCGACGGTGCGGCCAGTGGTGGCAGCGAGAACGACGCGGACGACGACGAGGAAGCTGAACTCGACGACGACGACGAGCGTTCGGTGCGGAAGATTTCACGCACCGCGATGGAGAACATTGCCCGCGCCGGCACTACGACGCAGTTCCGATTCAATGGCGCTGTCAAATCGTACCTGCCCGGCGGTGCGATGGGGAAGCCCGCCGCTCCCGCTCCGAGCACCAAGGCACCCGCGCCCCCGATCCCGATGTCCCGCGAGAGTCTCGCCGGCAAGGCTAACGGTGCTTCCACGGCAGCAGCAGCGGTCCAGGCGATCG AGGTCAGCGGGCGCCTGCCGCCAGAGGGCGCCGCAAACAACAGTGTAAATGGTGTCGGTGGTGGTGGCAGTGCAAAACAACATAGCAGTGGTTCTACCGGTGCGCTATTGCAGCAGGGCGGCGGTGGCTCCGTTGGCTCGTCCACGGCACCATCGCCACCTTCCCTGACGCGGCGCGAGATCGAGAAGAATCAAATCAATCGCGAAAAGAGTGGTGAACCCGCGGTGCCAGCAGCAGCGGCATCATCCGGCACCAACAGCATTAACGGTAGTGTGGCCAGTGGT]
consensusID : consensus_5663#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 675 fasta sequence
[CCGCGGACGCGTGGGCTGGAGGCAGCAGCAGTACCGAGCGCCGCGTCATCGCCGACGACGGGAATTTGCGATTCGCCTTCGATCCAGCAGCTCACGACCAAGCTCGGCAGTCTACATCTGGCGACCTCTACGCCGACTGGCGCTGCGAACGGATCCGCCGTCTCGGTACAGGATCGCCGTAACCTCGAGTACGTAACGAGCGACGAGGAGGAGGAGGACGACGACGACGACGAAGACGTCGAAGAAGGAGAGGGCGACAACGTGGACGGTGAGAACGAGCGTGGACGGCGCAACAACAGCTCCCGGTCCTACCAGGTCAATCCCGAATCGAGCGAGAGCGAGGACGCACACGACGGTGCGGCCAGTGGTGGCAGCGAGAACGACGCGGACGACGACGAGGAAGCTGAACTCGACGACGACGACGAGCGTTCGGTGCGGAAGATTTCACGCACCGCGATGGAGAACATTGCCCGCGCCGGCACTACGACGCAGTTCCGATTCAATGGCGCTGTCAAATCGTACCTGCCCGGCGGTGCGATGGGGAAGCCCGCCGCTCCCGCTCCGAGCACTAAGGCACCCGCGCCCCCGATCCCGATGTCCCGCGAGAGTCTCGCCGGCAAGGCTAACGGTGCTTCCACAGCAGCAGCAGCGGTCCAGGCGATCGAGGTCAGCGGG]
[+] EMBL BM618379 [CCGCGGACGCGTGGGCTGGAGGCAGCAGCAGTACCGAGCGCCGCGTCATCGCCGACGACGGGAATTTGCGATTCGCCTTCGATCCAGCAGCTCACGACCAAGCTCGGCAGTCTACATCTGGCGACCTCTACGCCGACTGGCGCTGCGAACGGATCCGCCGTCTCGGTACAGGATCGCCGTAACCTCGAGTACGTAACGAGCGACGAGGAGGAGGAGGACGACGACGACGACGAAGACGTCGAAGAAGGAGAGGGCGACAACGTGGACGGTGAGAACGAGCGTGGACGGCGCAACAACAGCTCCCGGTCCTACCAGGTCAATCCCGAATCGAGCGAGAGCGAGGACGCACACGACGGTGCGGCCAGTGGTGGCAGCGAGAACGACGCGGACGACGACGAGGAAGCTGAACTCGACGACGACGACGAGCGTTCGGTGCGGAAGATTTCACGCACCGCGATGGAGAACATTGCCCGCGCCGGCACTACGACGCAGTTCCGATTCAATGGCGCTGTCAAATCGTACCTGCCCGGCGGTGCGATGGGGAAGCCCGCCGCTCCCGCTCCGAGCACTAAGGCACCCGCGCCCCCGATCCCGATGTCCCGCGAGAGTCTCGCCGGCAAGGCTAACGGTGCTTCCACAGCAGCAGCAGCGGTCCAGGCGATCGAGGTCAGCGGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5663#0 CCGCGGACGCGTGGGCGCGATCACCACCAACACCACGACAGCAGCAGCAACGGCACGACA 60
consensus_5663#1 ------------------------------------------------------------
consensus_5663#0 CAGACAGCGGCAGCCGTAACGCCATCGGCTAAGCAGTCGGCTCCAGGGTCAGACGGTGGC 120
consensus_5663#1 ------------------------------------------------------------
consensus_5663#0 AACGGCGGCAGTGGCCACCAACACAAGCACAACGGCAATACAGCACTGGAGGCAGCAGCA 180
consensus_5663#1 -----------------------------CCGCGGACGCGTGG-GCTGGAGGCAGCAGCA 30
* *** * ***************
consensus_5663#0 GTACCGAGCGCCGCGTCATCGCCGACGACGGGAATTTGCGATTCGCCTTCGATCCAGCAG 240
consensus_5663#1 GTACCGAGCGCCGCGTCATCGCCGACGACGGGAATTTGCGATTCGCCTTCGATCCAGCAG 90
************************************************************
consensus_5663#0 CTCACGACCAAGCTCGGCAGTCTACATCTGGCGACCTCTACGCCGACTGGCGCTGCGAAT 300
consensus_5663#1 CTCACGACCAAGCTCGGCAGTCTACATCTGGCGACCTCTACGCCGACTGGCGCTGCGAAC 150
***********************************************************
consensus_5663#0 GGATCCGCCGTCTCGGTACAGGATCGCCGTAACCTCGAGTACGTAACGAGCGACGAGGAG 360
consensus_5663#1 GGATCCGCCGTCTCGGTACAGGATCGCCGTAACCTCGAGTACGTAACGAGCGACGAGGAG 210
************************************************************
consensus_5663#0 GAGGAGGAGGACGACGACGACGAAGACGTCGAAGAAGGAGAGTGCGCCAACGTGGACGGT 420
consensus_5663#1 GAGGAGGACGACGACGACGACGAAGACGTCGAAGAAGGAGAGGGCGACAACGTGGACGGT 270
******** ********************************* *** *************
consensus_5663#0 GAGAACGAGCGTGGACGGCGCAACAACAGCTCCCGATCCTACCAGGTCAATCCCGAATCG 480
consensus_5663#1 GAGAACGAGCGTGGACGGCGCAACAACAGCTCCCGGTCCTACCAGGTCAATCCCGAATCG 330
*********************************** ************************
consensus_5663#0 AGCGAGAGCGAGGACGCACGCGACGGTGCGGCCAGTGGTGGCAGCGAGAACGACGCGGAC 540
consensus_5663#1 AGCGAGAGCGAGGACGCACACGACGGTGCGGCCAGTGGTGGCAGCGAGAACGACGCGGAC 390
******************* ****************************************
consensus_5663#0 GACGACGAGGAAGCTGAACTCGACGACGACGACGAGCGTTCGGTGCGGAAGATTTCACGC 600
consensus_5663#1 GACGACGAGGAAGCTGAACTCGACGACGACGACGAGCGTTCGGTGCGGAAGATTTCACGC 450
************************************************************
consensus_5663#0 ACCGCGATGGAGAACATTGCCCGCGCCGGCACTACGACGCAGTTCCGATTCAATGGCGCT 660
consensus_5663#1 ACCGCGATGGAGAACATTGCCCGCGCCGGCACTACGACGCAGTTCCGATTCAATGGCGCT 510
************************************************************
consensus_5663#0 GTCAAATCGTACCTGCCCGGCGGTGCGATGGGGAAGCCCGCCGCTCCCGCTCCGAGCACC 720
consensus_5663#1 GTCAAATCGTACCTGCCCGGCGGTGCGATGGGGAAGCCCGCCGCTCCCGCTCCGAGCACT 570
***********************************************************
consensus_5663#0 AAGGCACCCGCGCCCCCGATCCCGATGTCCCGCGAGAGTCTCGCCGGCAAGGCTAACGGT 780
consensus_5663#1 AAGGCACCCGCGCCCCCGATCCCGATGTCCCGCGAGAGTCTCGCCGGCAAGGCTAACGGT 630
************************************************************
consensus_5663#0 GCTTCCACGGCAGCAGCAGCGGTCCAGGCGATCGAGGTCAGCGGGCGCCTGCCGCCAGAG 840
consensus_5663#1 GCTTCCACAGCAGCAGCAGCGGTCCAGGCGATCGAGGTCAGCGGG--------------- 675
******** ************************************
consensus_5663#0 GGCGCCGCAAACAACAGTGTAAATGGTGTCGGTGGTGGTGGCAGTGCAAAACAACATAGC 900
consensus_5663#1 ------------------------------------------------------------
consensus_5663#0 AGTGGTTCTACCGGTGCGCTATTGCAGCAGGGCGGCGGTGGCTCCGTTGGCTCGTCCACG 960
consensus_5663#1 ------------------------------------------------------------
consensus_5663#0 GCACCATCGCCACCTTCCCTGACGCGGCGCGAGATCGAGAAGAATCAAATCAATCGCGAA 1020
consensus_5663#1 ------------------------------------------------------------
consensus_5663#0 AAGAGTGGTGAACCCGCGGTGCCAGCAGCAGCGGCATCATCCGGCACCAACAGCATTAAC 1080
consensus_5663#1 ------------------------------------------------------------
consensus_5663#0 GGTAGTGTGGCCAGTGGT 1098
consensus_5663#1 ------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||