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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5694#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1168 fasta sequence
[CCGCGGACGTGCGATACAGATAAGGATTCGGGGTTGAGCTCGATCAAGCTGCTGGAGGGCAGTCAGACACACCACACGTACCCACTGGCGGATGGGGGGACCGATTACGCGGAGGTTGATCCTCGTGGACTGACGTCATTCTACAATCGGAAGTCCCCGGAGAGTCCAACGCCGTACGCTACCACGATGATCATCAACGGCATTCCACGGAGTGACAATGGGGATCTGGGCTATCAGGGTCACGATACGTTCTCGTCCACCTCGTCCAGCTTCCGATCGTTCTACGGCTATCCGCGACCCATCAACCCAAACAATGTTCCTCCAAACTGGGTCGACTATCTGCCACCGCCACCGGAGCATCCGCCTCCGATTCCGCAACCGATCGAAACACTCAACCATCATCACCTGAATCACGTCTACCCGTCCGAGCTGGTCGGCACAATAAACAGCTCGCAAACGTCCAGCTACTGTTCGCGCCGCACCAGCGGGTACAAGTGAGACCGTGGCGCTGCGCTTTGGCTGGCAGGCAGTGCAACATACCACCACCAACTACCGAGCCGACCAGCAAACAACCAACTCTAACAAAAACCACTAAAACACACACACACACAAATGCCGCCAAACAGTGAA--ACACACACGATCAATTTTGGGTGACCTCTAGGGTGGTAGTAGTCGCAAATGGCGGGCCGCAATGCCCACGTGTACATTGAATCATCGGACGACGATCACTACATTCGGGACGTTTTGCTCCTTGCGGGCGTTTCTCTCTGTGTGTGTGTGTTTCAGCTGCGTCCCAGCGGCCAACGATAAAAGATCCTTACGGGATTATCGTGCAAATGTAGTGCAAACTTCTTCGGGATAGTGACAATTCCACCCGTGCCGTCCGGGTCCGGAAAGCTGCACGGTGCCCACTGGAAGTCACCACCTCACACACGTTGCCATCAACAGCTGCTAGAGCTTTGATCGGTGTGCTTGTGTGCGTTTGGGCAGTTGAATGTCATTGGGTTCGGCTGGACCTGCTCAAGATGTGTTGTGGCCATACGGATTAGGGTGTGCCAAGTGTGGTGTAGCGTTTATCACAGCCCGCCGACGCGGTTCGCCTACGTAGAGATGTGCGAACGCGCGAATCGCCGTAGATACAGATGGTAGTGATGAATATGAAGTATAT]
[+] EMBL BM632999 [CCGCGGACGTGCGATACAGATAAGGATTCGGGGTTGAGCTCGATCAAGCTGCTGGAGGGCAGTCAGACACACCACACGTACCCACTGGCGGATGGGGGGACCGATTACGCGGAGGTTGATCCTCGTGGACTGACGTCATTCTACAATCGGAAGTCCCCGGAGAGTCCAACGCCGTACGCTACCACGATGATCATCAACGGCATTCCACGGAGTGACAATGGGGATCTGGGCTATCAGGGTCACGATACGTTCTCGTCCACCTCGTCCAGCTTCCGATCGTTCTACGGCTATCCGCGACCCATCAACCCAAACAATGTTCCTCCAAACTGGGTCGACTATCTGCCACCGCCACCGGAGCATCCGCCTCCGATTCCGCAACCGATCGAAACACTCAACCATCATCACCTGAATCACGTCTACCCGTCCGAGCTGGTCGGCACAATAAACAGCTCGCAAACGTCCAGCTACTGTTCGCGCCGCACCAGCGGGTACAAGTGAGACCGTGGCGCTGCGCTTTGGCTGGCAGGCAGTGCAACATACCACCACCAACTACCGAGCCGACCAGCAAACAACCAACTCTAACAAAAACCACTAAAACACACACACACACAAATGCCGCCAAACAGTGAA ACACACACGATCAATTTTGGGTGACCTCTAGGGTGGTAGTTCTCGCAAATGGCGGGCCCCAATGCCCACGTGTACATTGA ]
[+] EMBL BM625944 [ ccgCAACCATCATCACCTGAATCACGTCTACCCGTCCGAGCTGGTCGGCACAATAAACAGCTCGCAAACGTCCAGCTACTGTTCGCGCCGCACCAGCGGGTACAAGTGAGACCGTGGCGCTGCGCTTTGGCTGGCAGGCAGTGCAACATACCACCACCAACTACCGAGCCGACTAGCAAACAACAAACTCTAACAAAAACCACGAAAA A ACAAACATAATTGCCGCCAAACAGTGAAACACACACACAATCAATTTTTGGTGACCTCTAGGGTGGTAGTAGTCGCAAATGGCGGGCCGCAATCCCCACGTGTACATTGAATCATCGGACGACGATCACTACATTCGGGACGTTTTGCTCCTTGCGGGCGTTTCTCTCTGTGTGTGTGTGTTTCAGCTGCGTCCCAGCGGCCAACGATAAAAGATCCTTACGGGATTATCGTGCAAATGTAGTGCAAACTTCTTCGGGATAGTGACAATTC ]
[+] EMBL BX608152 [ GTAGTAGTCGCAAATGGTGGGCCGCAATGCCCACGTGTACATTGAATCATCGGACGACGATCACCACATTCGGAACGTTTTGCTCCTTGCAGGCGTTTCTC TGTGTGTGTGTTTCAGCTGCGTCCCAGCGGCCAACGATAAAAGATCCTTACGGGATTATCGTGCAAATGTAGTGCAAACTTCTTCGGGATTGTGACAATTCCACCCGTGCCGTCCGGGTCCGGAAAGCTGCACGGTGCCCACTGGAAGTCACCACCTCACACACGTTGCCATCAACAGCTGCTAGAGCTTTGATCGGTGTGCTTGTGTGCGTTTGGGCAGTTGAATGTCATTGGGTTCGGCTGGACCTGCTCAAGATGTGTTGTGGCCATACGGATTAGGGTGTGCCAAGTGTGGTGTAGCGTTTATCACAGCCCGCCGACGCGGTTCGCCTACGTAGAGATGTGCGAACGCGCGAATCGCCGTAGATACAGATGGTAGTGATGAATATGAAGTATAT]
consensusID : consensus_5694#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 653 fasta sequence
[CCGGCTCGATCAAGCTGCTGGAGGGCAGTCAGACACACCACACGTACCCACTGGCGGATGGGGGGACCGATTACGCGGAGGTTGATCCTCGTGGACTGACGTCATTCTACAATCGGAAGTCCCCGGAGAGTCCAACGCCGTACGCTACCACGATGATCATCAACGGCATTCCACGGAGTGACAATGGAGATCTGGGCTATCAGGGTCACGATACGTTCTCGTCCACCTCGTCCAGCTTCCGATCGTTCTACGGCTATCAGCGACCCATCAACCCAAACAATGTTCCTCCAAACTGGGTCGACTATCTGCCCCCGCCACCGGAGCATCCGCCTCCGATTCCGCAACCGATCGAAACACTCAACCATCATCACCTGAATCACGTCTACCCGTCCGAGCTGGTCGGCACAATAAACAGCTCGCAAACGTCCAGCTACTGTTCGCGCCGCACCAGCGGGTACAAGTGAGACCGTGGCGCTGCGCTTTGGCTGGCAGGCAGTGCAACATACCACCACCAACTACCGAGCCGACTAGCAAACAACAAACTCTAACAAAAACCACGAAAAAACAAACATAAATGCCGCCAAACAGTGAAACACACACACACAATCAATTTTGGGTGACCTCTAGGGGGAAAAAAAGGGGGGGGGCCTCAA]
[+] EMBL BM595148 [CCGGCTCGATCAAGCTGCTGGAGGGCAGTCAGACACACCACACGTACCCACTGGCGGATGGGGGGACCGATTACGCGGAGGTTGATCCTCGTGGACTGACGTCATTCTACAATCGGAAGTCCCCGGAGAGTCCAACGCCGTACGCTACCACGATGATCATCAACGGCATTCCACGGAGTGACAATGGAGATCTGGGCTATCAGGGTCACGATACGTTCTCGTCCACCTCGTCCAGCTTCCGATCGTTCTACGGCTATCAGCGACCCATCAACCCAAACAATGTTCCTCCAAACTGGGTCGACTATCTGCCCCCGCCACCGGAGCATCCGCCTCCGATTCCGCAACCGATCGAAACACTCAACCATCATCACCTGAATCACGTCTACCCGTCCGAGCTGGTCGGCACAATAAACAGCTCGCAAACGTCCAGCTACTGTTCGCGCCGCACCAGCGGGTACAAGTGAGACCGTGGCGCTGCGCTTTGGCTGGCAGGCAGTGCAACATACCACCACCAACTACCGAGCCGACTAGCAAACAACAAACTCTAACAAAAACCACGAAAAAACAAACATAAATGCCGCCAAACAGTGAAACACACACACACAATCAATTTTGGGTGACCTCTAGGGGGAAAAAAAGGGGGGGGGCCTCAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5694#0 CCGCGGACGTGCGATACAGATAAGGATTCGGGGTTGAGCTCGATCAAGCTGCTGGAGGGC 60
consensus_5694#1 ----------------------------------CCGGCTCGATCAAGCTGCTGGAGGGC 26
***********************
consensus_5694#0 AGTCAGACACACCACACGTACCCACTGGCGGATGGGGGGACCGATTACGCGGAGGTTGAT 120
consensus_5694#1 AGTCAGACACACCACACGTACCCACTGGCGGATGGGGGGACCGATTACGCGGAGGTTGAT 86
************************************************************
consensus_5694#0 CCTCGTGGACTGACGTCATTCTACAATCGGAAGTCCCCGGAGAGTCCAACGCCGTACGCT 180
consensus_5694#1 CCTCGTGGACTGACGTCATTCTACAATCGGAAGTCCCCGGAGAGTCCAACGCCGTACGCT 146
************************************************************
consensus_5694#0 ACCACGATGATCATCAACGGCATTCCACGGAGTGACAATGGGGATCTGGGCTATCAGGGT 240
consensus_5694#1 ACCACGATGATCATCAACGGCATTCCACGGAGTGACAATGGAGATCTGGGCTATCAGGGT 206
***************************************** ******************
consensus_5694#0 CACGATACGTTCTCGTCCACCTCGTCCAGCTTCCGATCGTTCTACGGCTATCCGCGACCC 300
consensus_5694#1 CACGATACGTTCTCGTCCACCTCGTCCAGCTTCCGATCGTTCTACGGCTATCAGCGACCC 266
**************************************************** *******
consensus_5694#0 ATCAACCCAAACAATGTTCCTCCAAACTGGGTCGACTATCTGCCACCGCCACCGGAGCAT 360
consensus_5694#1 ATCAACCCAAACAATGTTCCTCCAAACTGGGTCGACTATCTGCCCCCGCCACCGGAGCAT 326
******************************************** ***************
consensus_5694#0 CCGCCTCCGATTCCGCAACCGATCGAAACACTCAACCATCATCACCTGAATCACGTCTAC 420
consensus_5694#1 CCGCCTCCGATTCCGCAACCGATCGAAACACTCAACCATCATCACCTGAATCACGTCTAC 386
************************************************************
consensus_5694#0 CCGTCCGAGCTGGTCGGCACAATAAACAGCTCGCAAACGTCCAGCTACTGTTCGCGCCGC 480
consensus_5694#1 CCGTCCGAGCTGGTCGGCACAATAAACAGCTCGCAAACGTCCAGCTACTGTTCGCGCCGC 446
************************************************************
consensus_5694#0 ACCAGCGGGTACAAGTGAGACCGTGGCGCTGCGCTTTGGCTGGCAGGCAGTGCAACATAC 540
consensus_5694#1 ACCAGCGGGTACAAGTGAGACCGTGGCGCTGCGCTTTGGCTGGCAGGCAGTGCAACATAC 506
************************************************************
consensus_5694#0 CACCACCAACTACCGAGCCGACCAGCAAACAACCAACTCTAACAAAAACCACTAAAACAC 600
consensus_5694#1 CACCACCAACTACCGAGCCGACTAGCAAACAACAAACTCTAACAAAAACCACGAAAAAAC 566
********************** ********** ****************** **** **
consensus_5694#0 ACACACACACAAATGCCGCCAAACAGTGAAACACACACG----ATCAATTTTGGGTGACC 656
consensus_5694#1 AAACATA----AATGCCGCCAAACAGTGAAACACACACACACAATCAATTTTGGGTGACC 622
* *** * *************************** *****************
consensus_5694#0 TCTAGGGTGGTAGTAGTCGCAAATGGCGGGCCGCAATGCCCACGTGTACATTGAATCATC 716
consensus_5694#1 TCTAGGGGGAAAAAA-----AGGGGGGGGGCCTCAA------------------------ 653
******* * * * * ** ***** ***
consensus_5694#0 GGACGACGATCACTACATTCGGGACGTTTTGCTCCTTGCGGGCGTTTCTCTCTGTGTGTG 776
consensus_5694#1 ------------------------------------------------------------
consensus_5694#0 TGTGTTTCAGCTGCGTCCCAGCGGCCAACGATAAAAGATCCTTACGGGATTATCGTGCAA 836
consensus_5694#1 ------------------------------------------------------------
consensus_5694#0 ATGTAGTGCAAACTTCTTCGGGATAGTGACAATTCCACCCGTGCCGTCCGGGTCCGGAAA 896
consensus_5694#1 ------------------------------------------------------------
consensus_5694#0 GCTGCACGGTGCCCACTGGAAGTCACCACCTCACACACGTTGCCATCAACAGCTGCTAGA 956
consensus_5694#1 ------------------------------------------------------------
consensus_5694#0 GCTTTGATCGGTGTGCTTGTGTGCGTTTGGGCAGTTGAATGTCATTGGGTTCGGCTGGAC 1016
consensus_5694#1 ------------------------------------------------------------
consensus_5694#0 CTGCTCAAGATGTGTTGTGGCCATACGGATTAGGGTGTGCCAAGTGTGGTGTAGCGTTTA 1076
consensus_5694#1 ------------------------------------------------------------
consensus_5694#0 TCACAGCCCGCCGACGCGGTTCGCCTACGTAGAGATGTGCGAACGCGCGAATCGCCGTAG 1136
consensus_5694#1 ------------------------------------------------------------
consensus_5694#0 ATACAGATGGTAGTGATGAATATGAAGTATAT 1168
consensus_5694#1 --------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||